Phodopus roborovskii (desert hamster): 127231062
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Entry
127231062 CDS
T08852
Symbol
Nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127231062 (Nrde2)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127231062 (Nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
AP3D1
TPR_12
Motif
Other DBs
NCBI-GeneID:
127231062
NCBI-ProteinID:
XP_051052413
UniProt:
A0AAU9ZSR2
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MALFPAFAGISEASGGAAPRKELDWLSNPSFCVGSLTALSQQAEEVTALASGGSPLTRSP
LKSELSDESATSKTLTQVSRRKKKEKRKKRKHQHRKKTKRRHEQSSSGESESDTDSGKDR
PSRSISDSQKASEKPSQGSNAVAAGHQSIWLEDIQTLAEVFRTDKKPDPANWEYKSLYRG
DIARYKRKGNSCLGINPKKQCISWEGAPAAKKHSHKHLERYFTKKNVGLMRTEGIAVCAS
TEPPSSEPVTFIPVKDSADAATPVATWLNPLGIYDQSTTQWLQGQGPPEQESKQPDSQQD
RESAALKARVEEFNRKVRENPRDTQLWMAFVAFQDEVMRSPGLYTLGEGEQEKHRKSLKL
LLEKKLAVLERAIESNPSSVDLKLAKLQLCAEFWEPSALAKEWQKLLFLHPNNTDLWQRY
LSFCQSQFGTFSVSKLHSLYGKCLSTLSAVKDGSILSHPVLPGTEEAMFALLLQHCHFLR
QAGHSEKAIALFQAMVDFTFFKPDSVKDLPTKVQVEFFEPFWDSGEPRVGEKGARGWRAW
MHQQERGGWVLVNPDEDEEEPEEDDQEIKDKTLPRWQIWLAVERSRDQRHWRPWRPDKTK
KQTEEDCEDPERQVLFDDIGQSLIRLSSPGLQFQLIDAFLQFLGVPSGFLPPASCLYLAM
DESSIFDSGLYDEKPLTYFNPSFLGISCVGYMEQLGCPRWTKGHSREGEEFVRNVFHLVL
PLFSGKQKSQLCLTWLRYEVAKVIWCLHTKKKRLKSQGKNCKKLAKNLLKEPENRNNFCL
WKQYAHLEWLLGNIEDARKVFDTALSMAGSSELKDRELCELSLLYAELEMELSPDSRGAT
TGRAVHVLTRLTESSPYGPYTGQVMATQVLKARKAYEHALQACLGQTCVSDPAAAESLDC
LASLVRCFMLFQYLTVGIDAAVCIYGQVFAKLKGSVLPEGPGPEDSASSQNLSSVLEAVT
LMHTSLLRFHMNTSVYPLAPLRETLAEALKLYPGNQVLWRAYVQIQNKTHSANKTRRFLD
AVTRAAKPLEPWLFAIEAEKMRKRLVESVQRIGGKDVHATIPETGLTHRIRALFENAIRS
DKGSQCPLLWRMYLKFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAMEYFPDDLQEILD
VMTEKELRVRLPLEELELLLED
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgccggcataagtgaggcctccggtggtgcggcacccagg
aaagaattagattggctgagcaacccaagcttttgtgttggaagtctaacggctctgagc
cagcaggctgaagaggtcacagcccttgcttctggagggtcaccactgacaaggagtcct
ctgaagtcagagctctccgacgagagtgccactagcaagacactcacacaggtaagcaga
agaaagaagaaagagaaaaggaagaaaaggaaacatcagcaccgcaagaaaactaagagg
agacacgagcagtcgagcagcggcgagtctgagtcagacactgattctggcaaggacagg
ccttccagaagcatcagcgacagtcagaaggcttctgagaaacccagtcaaggaagtaat
gctgttgctgctggacaccaatccatttggctggaagacattcagactctggcagaagtc
ttcaggacagataagaaaccagatcctgccaactgggagtataaatctctctaccgaggg
gacatagcaaggtacaagaggaaagggaactcctgcctgggcatcaaccctaagaaacag
tgtatatcttgggaaggggctcctgcggctaagaagcattcacacaagcacctggagcgc
tattttaccaagaagaacgtggggctaatgcgcactgaggggattgccgtgtgcgctagc
actgagcctccctcctccgagccagtcacatttatcccagtgaaggactctgctgatgcg
gctactcctgttgcaacgtggctgaatcctctggggatttatgatcagtccactacacag
tggttacaaggacagggtccaccagagcaagaatcaaagcagccagactcacagcaggac
agggagagcgctgctctcaaagccagggtggaggagttcaacagaaaggtgcgggagaac
cctcgggacactcagctgtggatggccttcgtagcgttccaggacgaggtcatgaggagt
cctggcctgtatacccttggggaaggagagcaggagaagcacaggaagtccctgaagctc
ctcctggagaagaaactggccgtgctggagcgggccatcgagagcaacccgagcagcgtg
gacctgaagctcgccaagctgcagctgtgcgccgagttctgggagcccagtgcgctggcc
aaggagtggcagaagctcctcttcctgcaccccaacaacacggacctgtggcagcgctac
ctctccttttgccagagtcagtttggcaccttttctgtgtccaaactccacagtctgtat
ggcaagtgcttgagtaccctgtctgcagttaaggacggcagcatcttatcccaccctgtg
ctgccgggcacggaggaggccatgttcgcgctccttcttcagcattgccactttctgcgg
caggccggccactcggagaaggccatcgctttgttccaggccatggttgacttcaccttc
ttcaagcctgacagtgtgaaagatctgcctaccaaagtacaggtggaattctttgaaccc
ttctgggacagcggagagccccgtgttggggagaagggagcccgaggctggcgggcatgg
atgcatcagcaggagcgtggcggctgggtgcttgtcaacccggatgaggatgaggaggaa
ccagaagaggatgaccaggagataaaagataagactctgcccaggtggcagatctggctt
gctgttgaacgttctcgagaccagaggcactggcggccctggcgcccagataagaccaag
aagcaaacggaggaggactgtgaggaccccgagagacaggtgctgtttgatgatattgga
cagtctctgatcagactttccagcccgggtcttcagttccagctcatcgatgcctttctg
cagttcttgggcgtgccttctggcttcctccctccagcctcttgcctttacttggccatg
gacgagagcagcatctttgacagtggactttatgacgaaaagcccttgacttacttcaac
ccgtcttttttgggcattagctgcgttggctacatggagcagttgggctgtcctcgctgg
accaaaggtcacagccgagagggcgaggagtttgtccgcaacgtgttccaccttgtcctg
cctctgttctcaggcaagcagaagtctcagctctgcctcacctggttgcggtatgaggtt
gccaaggtcatttggtgtctacacactaaaaagaagcgattaaagtctcaaggaaagaac
tgcaaaaaattagccaagaatctactcaaagagccagaaaaccgcaataatttttgcctc
tggaagcagtatgcacacctggagtggttgcttggcaacatagaggatgccagaaaagtg
ttcgatacagcacttagcatggcaggcagcagtgagctgaaggaccgagagctctgtgaa
ctcagtctgctttatgccgagctggagatggaactgtcgcccgactcgagaggtgccact
acaggccgagctgtccacgtgttaactcgactgactgagagcagtccctacggtccctac
actgggcaggtcatggccactcaggttctgaaggctcgaaaggcttatgaacacgcgctg
caggcctgtctgggacagacctgtgtttctgacccagctgctgctgagtccttggactgc
ctggctagcttggtcagatgcttcatgcttttccagtatttgactgtagggatagatgct
gctgtgtgcatatatggacaggtgtttgccaagctgaagggctctgttctcccagaaggc
cctgggccagaggacagcgccagctcccagaatttgagcagtgttctcgaagctgtcacc
cttatgcatacaagtctgctgcgattccatatgaacactagtgtgtaccctctggctccc
ctccgagagacgctcgcagaggccctaaagctgtatccaggcaatcaggttctctggagg
gcatacgtacagattcagaataagacccacagtgccaacaagaccaggaggttcttggat
gcagtcaccagggctgccaaacccctggagccttggctgtttgcaatcgaagctgagaag
atgaggaagaggctggtggagtctgttcagaggataggtggtaaagatgttcacgccacc
atcccggagacaggcctcacgcaccggatcagggccttgtttgaaaatgcaattcggagt
gacaagggcagccagtgccccctactgtggaggatgtatttgaagtttttggtttcctta
ggcaacaaggaaagaagcaaaggtgtgttctacaaggcactccagagctgtccttgggca
aaggtgctgtacatggatgccatggagtacttcccagacgatctgcaagagatcctggat
gtgatgactgagaaggagcttcgtgtacgtctgcccctggaggagctagaattactcctg
gaggactag
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