Phodopus roborovskii (desert hamster): 127231458
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Entry
127231458 CDS
T08852
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127231458 (Nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127231458 (Nfrkb)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
127231458 (Nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
127231458
NCBI-ProteinID:
XP_051052965
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPQFPADNMEQQNEIILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFHRLLKQILASRSDLLEMARRSGPALPFRHKRHSPSRS
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQEKFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLSTTDMKTADKIELGDSDLKIMLKKHHEKRKHQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEKKKKIKLIKSEAEDLAEPLSNTEGVPALSQAP
SPLTISSIKEEPLEDIKPCLGINELFSSFFSLLLEILLESQASLPMLEDRVLDWQSSPAS
SLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQYQDNEKEL
AALFHLWLETKDQTFCKQENEDSSDAMTPVPRVRTDYVVRPSTGEEKRVFQEQERYRYSQ
PHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLP
NGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLH
RSRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKESSMKGLSGPSEQSQMSLSD
SSMPPTPVTPVTPTTPALPTTPISPPPVAAVNKSGSTTVSEPAKSSSGVLLVSSPTMPQL
GTMLSPASIQTPPNSQATARVVSHSSSAGLPQVRVVAQPSLPAVSQQSVGPTQTLPQMPA
GPQIRVPVTATQTKVVPQAVVATVPVKGQTAAASVQRPGPGQTGLTVTSLPAAVSPVSKP
ALSSPGTSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGKDV
LRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTAGKGISATLHV
TSNPVHAADSPAKAPSASVPSSAPAGTTVVKVTPELKPTETSNSAFRLMPALGVSVADQK
GKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTIHSSTVSLP
SINATVSKTVAVASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSVIS
QPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQ
QGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggatcacatgctgacagatcccctagaactgggtccctgtggagatggt
cacggtacaaggatcatggaagactgtcttctgggtggtaccagggttagtctgcctgaa
gaccttctggaggatcctgagatattctttgatgtcgtcagcctttccacatggcaggaa
gtactaagtgactctcagcgtgaacatctccagcagtttctgcctcagtttcctgcagac
aacatggagcagcaaaatgagatcatccttgccctgttcagtggggagaacttccgcttc
ggaaaccctctgcacattgcccagaagctcttccgagatggacactttaaccctgaggtg
gtcaagtatcgtcagctctgcttcaagtcacagtacaagcggtatctcaactctcaacag
cagtatttccatcggctgctaaaacagattcttgcttccagaagtgatctgttggagatg
gctcgcaggagtggccccgctctcccctttcgacacaagcgccattcaccatcccgaagc
cccgaggagcgggagtggcggacccagcagcgttacttgaaggtcttgcgtgaagtgaag
gaggagtgtggtgacactgccctgtcctctgatgaagaggccacgttggatttacaagaa
aaattttcttttgaagatctcagctcatggcttccaagctctccagcacgttctcctagt
cctgcggtgcccctgagggtggtgcccacgctttccactacggatatgaaaactgcagat
aaaatagagctgggggacagtgacctgaagataatgttaaagaagcatcatgagaagcgg
aaacatcaaccagatcacccagaccttttgacaggggacctgaccctcagtgacatcatg
actcgagtaaatgccggcaggaagggctctctagcagccttatatgatttggctgttctt
aaaaaaaaagtgaaggaaaaagagaagaagaagaaaataaagttgataaaatctgaagca
gaggatctggctgagcctctaagcaatactgaaggggtcccagctctctcccaggccccc
tctccactgacgatatcgtctatcaaggaagaacccctggaagacatcaagccttgcctt
ggaatcaatgaactattttccagttttttctctcttctgttagagatcttgctggaaagt
caggctagccttcctatgctggaggatcgggttttggactggcaatcttctccagccagc
tccctcaacagctggttctctgctgcccccaactgggctgagttggtgttgcctgcactg
cagtatcttgctggagaaagccgagctgttccttctagtttctctccatttgttgaattc
aaagagaaaacccagcagtggaaattacttggtcaatatcaagataatgaaaaggaatta
gctgctctctttcacctgtggttagaaaccaaagaccagactttctgtaagcaggaaaat
gaagacagctcagatgccatgacgcctgtccctcgagtaagaactgactatgtggtgcga
cctagcacaggagaagagaaacgggtttttcaagagcaggagcgttacaggtatagccaa
ccccataaggcattcacctttcgcatgcatggctttgagtctgtggtgggaccagtgaag
ggcgtgtttgacaaggagacctccctcaacaaggctcgtgagcattcgctgctgcgctct
gaccgtcctgcctatgtcaccattctgtctcttgttcgggatgctgcagctcggctgcct
aatggggaaggcactcgagcagagatctgtgaactgctcaaggactctcagtttcttgct
ccagatgtcaccagcactcaggtgaacactgtagtgagtggagcactggatcgattgcat
tatgaaaaagacccttgtgtgaaatatgacattggacgaaagctgtggatctacctgcat
cgcagccggagtgaggaagagtttgaacggattcatcaagctcaagcagcggcagctaaa
gccagaaaagctcttcagcaaaaacccaagccgccatccaaggtgaagtccagtaataag
gagagctccatgaagggccttagtggcccttctgagcaaagccagatgagcctcagtgac
tctagcatgccacctaccccagttacacctgtaacccccaccacaccagcattgcccacc
acccccatctctcctccacctgtggcagcagtgaacaaaagcggctctaccactgtctcc
gagccagctaagtcaagttcaggtgttcttctggtgtcctcaccaacaatgcctcagcta
ggaacgatgctttccccagcttccatccagactccacccaattctcaggccactgctcgg
gttgtgagccactctagctcagccggactgccccaggttcgggtggtagctcagcccagc
cttcctgctgtttcccagcagtcagtagggccaacacaaacattaccacagatgccagca
ggaccacagatccgtgtaccagtcactgctacacaaaccaaagtagtaccccaggcagtt
gtggcaactgttccagtcaaggggcaaactgcagcagcctctgtgcagcggcctggacct
gggcagacagggcttacagtgacgagtctccctgctgcagtcagcccagtgagcaaacca
gccttgagttctcctgggacctctgctccaagtgcctccacaacagctgtcatccagaat
gtcacaggacagaacatcatcaagcaggtgtcaatcactgggcagcttggtgtgaagcct
caaacaggcaacagcattccactcacagccactaacttccgtatccagggtaaggatgta
ctgcgcctgccaccctcttccatcaccacagatgccaagggccagacagttttgagaatc
actccggacatgatggccacgttggccaagtctcaggttaccacagtcaaattgactcag
gacctctttggaacaggaagtggcactgcaggcaaaggcatctctgctaccttacatgtc
acttccaatcctgtccatgcagctgacagccctgccaaggccccttcagccagtgttcct
tcatcagctccagcaggtactaccgtggtcaaagtaactcctgaactgaagccaacagaa
acttcgaattcagcttttcgcttgatgccagctcttggtgtgagcgtggcagatcagaag
ggaaagaacacagtggcctcttcagaagcaaaacctgctgccacaatccgcattgtgcaa
ggtctgggagtgatgcctcctaaagcaggccagaccattactgttgcagcgcatgcaaag
caaggagcctctgttgctggtgggtctggaactatccattcttcaacggtgtccttgccc
agtataaatgccactgtgtctaagactgtggctgtggcctctggggcaacaagtactccc
atcagcatcgggactggagcccccactgtgcggcaggtccctgttaacactacagttgtg
tccacatcccagtctgggaagcttcctacaaggatcacagttcctctgtctgtgattagc
cagccaatgaagggcaagagcgtcgtcacagcccctattatcaaaggcaaccttggagcc
aatctcagtgggctgggtcgcaacatcatccttacaaccatgccagcaggtactaagctc
attgctggcaataagccagtgagtttcctcactgcccagcagctgcagcagcttcagcaa
caaggtcaggctacacaggtgcgtatccagactgttcctgcatcccatctccagcagggc
acagcttctggctcctccaaagcagtctccactgttgttgtgaccaccgcgccatctcct
aaacaagcacctgaacaacagtga
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