Phodopus roborovskii (desert hamster): 127231497
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Entry
127231497 CDS
T08852
Symbol
Arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127231497 (Arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127231497 (Arfgef1)
Membrane trafficking [BR:
prob04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
127231497 (Arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
CheX
Motif
Other DBs
NCBI-GeneID:
127231497
NCBI-ProteinID:
XP_051053023
UniProt:
A0AAU9YQL1
LinkDB
All DBs
Position
Unknown
AA seq
1846 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKVETEKQSPPHGEAKA
GSSTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMERERHRQHHHLLQSPVSHHE
PESPQLRYLPPQTVDHPSQEHEGDLDPHTHDVDKSLQDDTEPENGSDISSAENEQTEADQ
ATAAETLSKNDILYDGDCEEKPHDIVQSIVEEMVNIIVGDMGEGTALSAHTDGNIGTIED
GSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPSPGAKFSHILQKDA
FLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQ
YLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFD
HKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNV
QELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQEISEIKHPETINRYG
SLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQ
GMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRL
FLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQV
KNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSTKQNVAS
EKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVG
LQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNI
DTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSLTGT
KDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDF
VRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPN
EDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQM
VNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSFQDA
VKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWF
PILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQ
QTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNC
LENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPSSGETAPPSPSPVSEKQLD
TISQRSVDIHDSVQPRSSDNRQQAPLVSVSTMNEEISKVKSTAKFPEQKLFAALLIKCVV
QLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLFKLL
DCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESR
VSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHASFY
YPLLCEIMQFDLIPELRAVLRRFFLRIGIVFQISQPPEQELGINKQ
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaagaagacgaagaacatgttcctgacccgggccctcgagaagattttg
gccgacaaggaagtgaagaaggcgcatcactcccagctgcgcaaagcgtgcgaggtggcc
ctcgaggaaataaaagttgaaactgagaaacaaagtcctccccatggagaagcaaaagct
ggatcaagtacccttccaccagtgaaatcaaagacaaattttattgaagcagacaagtac
ttcttaccttttgagttggcgtgccagtccaagtgtcctcgaatagttagtacatcgcta
gactgtttgcagaaacttattgcttatgggcacttgactggcaatgctccggatagtacg
acaccaggcaaaaagttaattgataggattattgaaacaatatgtggctgcttccaaggt
cctcaaacagatgaaggagttcagttgcagatcataaaggctttacttaccgcagtgaca
tcacaacacatagaaatccacgaaggaactgtcttgcaagctgtaagaacatgctacaat
atctatctagccagcaaaaatctcatcaatcagacaacagccaaagctactcttactcag
atgctaaatgttatctttgcacgcatggaaaaccaagcattacaggaagccaaacaaatg
gaaagagaaaggcaccggcagcaccatcatctgttacagtctccagtaagccatcatgag
cctgagtcacctcagcttagatatttgccacctcagactgttgaccatccatcccaagaa
cacgaaggagatcttgatcctcatactcatgatgtggataaaagtctccaagatgacaca
gagcctgaaaatggatctgatatttccagtgcagaaaatgagcagacagaagctgatcag
gcaactgcagctgaaaccttatctaaaaatgatatattatatgatggagactgtgaggaa
aagccacatgatattgtccagagcatcgtcgaagaaatggtgaacatcattgttggagat
atgggagaagggactgctctaagtgcgcacacagatggcaacattggaactatagaggat
ggtagtgacagtgagaacattcaagcaaacggaatccccggaacaccaatttctgttgca
tatacaccatcgttacctgatgacagattgtctgtctcttccaatgatactcaggaatct
ggaaattcttcaggaccttcacctggtgctaagttttcccacattttacaaaaggatgcc
tttctagtattcaggtcattatgcaagctgtcaatgaaaccactatcagatggaccacca
gatccaaagtctcatgagttacggtccaagattctttcattgcagttacttctgtccatt
ctgcagaatgcaggacctgttttcagaacaaatgagatgtttattaatgctattaagcag
tatctgtgtgttgcactgtcaaaaaacggagtctcatctgttccagaggtttttgagctt
tctctttccatatttcttactttgttgtcaaacttcaagacacatctgaagatgcagatt
gaggtattctttaaagaaattttcctatacattttggaaacttctaccagctcatttgat
cataagtggatggttattcagacactgacaagaatctgtgcagatgcacagagtgtggtg
gatatatatgtaaattatgactgtgacttaaatgcagcaaatatatttgaaagacttgta
aatgacttgtcaaaaattgcccaaggaaggggcagtcaggaacttggtatgagtaatgtc
caggaattgagccttcggaagaaagggttagaatgtttagtttcaattttgaagtgtatg
gttgaatggagtaaggatcagtatgtaaaccccaactctcagactaccctaggtcaggaa
aaaccctcagagcaagagataagtgaaatcaaacaccctgagactataaacagatacgga
agtttaaattctttagaatccacatcatcgtcaggaattggcagctacagtacacagatg
tctggcactgataatccggaacaatttgaggtcctaaagcagcaaaaagaaataatagaa
caagggattgatttatttaataagaaaccaaagagaggaatacaatacctccaagaacaa
gggatgcttggcaccacacctgaagacatagctcagttcttacatcaagaagaaagacta
gactctactcaggtgggtgagttcctgggagataatgataaattcaataaagaagttatg
tatgcatatgtggatcaacatgacttttcaggaaaggactttgtttcagcccttcgtctt
tttctggaaggattccgtcttccaggggaagctcaaaaaattgatcgattaatggaaaaa
tttgctgcaagatacctagaatgcaaccaaggacaaaccctttttgctagtgcggatact
gcttatgttttggcctactcaattatcatgttgactacagaccttcacagcccacaggtt
aaaaacaaaatgacaaaggaacagtacattaaaatgaatcgaggtatcaatgacagtaaa
gacctccctgaagaatatctgtcagccatttacaatgaaatagcggggaagaaaatatca
atgaaagaaacaaaagagctaacaatccctacaaaatcaactaagcagaatgtagccagt
gaaaaacaaagacgacttctgtataacttagaaatggaacagatggccaagacagctaaa
gcactcatggaagctgtgagccatgtccaggcaccttttacaagcgcaacacacttggag
catgtgaggcctatgtttaagttggcttggacaccgtttctggctgcattcagtgtgggt
ctacaagactgtgatgatactgaagtggcctctctttgcctagaagggataagatgtgca
atcaggattgcgtgcattttcagcatccagctggaaagagatgcctatgtccaagcacta
gccagatttaccttgcttaccgtgagctcaggcatcacagagatgaagcagaagaacatt
gacacgataaaaacactcatcacagtggctcacacggatggaaactacttaggaaactcg
tggcatgagatcctgaagtgcatcagtcagttggagctggcacaacttataggaactgga
gtgaagcctcggtacatttctgggacagttagaggcagagaaggctctctcacggggaca
aaagaccaggctcctgatgaatttgtcggtctggggctagttggagggaatgtggactgg
aagcagatagcaagcattcaggagtctattggagaaaccagctcgcagagtgttgtggtg
gctgtagacaggatattcacaggatctacaaggctagatggaaatgctattgttgatttt
gttcgttggctctgtgccgtgtctatggatgaattgctttccactacacacccaaggatg
tttagtctacaaaagattgtagaaatatcatactataacatgggaagaatacgactgcag
tggtctcggatttgggaagttattggagatcattttaataaggttggttgcaatcctaat
gaagatgtagccatatttgcagtggactccctgaggcaattgtcaatgaagttcttagag
aaaggggaacttgcaaatttcagatttcaaaaggatttcttacggccatttgaacatata
atgaaacgaaacaggtctccaacaattcgagatatggttgtacggtgtatagcacagatg
gttaattctcaggctgcaaacattcgctcaggatggaagaacatcttctcagtattccat
ctcgctgcatcagaccaagatgaaagcatagtagaacttgcatttcagacaacagggcac
attgtcactcttgtatttgaaaaacactttccagccactattgattctttccaggatgca
gtgaagtgcttatctgaattcgcatgtaatgcagctttcccagacacaagtatggaagca
attcgacttattcgccattgtgcaaaatatgtgtctgacagacctcaggctttcaaggag
tacacaagtgacgacatgaatgtggcccctgaagacagggtgtgggtgagagggtggttc
ccgattctctttgagttatcatgtatcatcaatagatgcaaattagatgtaagaaccagg
ggcctaacagtcatgtttgagataatgaagacctatggccacacttacgagaagcactgg
tggcaggacttgtttagaattgttttcagaatctttgacaatatgaaactgccagagcag
cagacagagaaagccgaatggatgacaacaacttgcaatcatgccctttatgcaatatgt
gatgtattcacccagtatttagaagttcttagtgatgtacttttggatgatatttttgcc
cagctatactggtgtgtgcaacaagataatgagcagttagcgcgatctggtacgaactgc
ttagaaaatgtggtaattctgaatggtgaaaagtttactctagaaatctgggataaaacg
tgtaactgcaccctggatatcttcaaaaccacaattccacatgcgctcctgacatggcgt
ccttcttcaggagagactgctcccccatccccatcccctgtgagtgaaaagcagttggat
acaatatcacagaggtctgtagatatacatgattctgttcaaccaagatcttcagacaac
agacagcaggcaccattggtctctgtttctacgatgaatgaagaaattagcaaagtgaaa
tctacagcaaaattcccagaacaaaaactgtttgctgccctgttgattaaatgtgttgtg
cagctggaactcatccagaccatcgacaacattgtgttcttcccagccacaagtaagaag
gaggacgcagagaacttagctgcagcccagagagatgcagtagactttgatgttcgagtg
gatactcaagaccaaggaatgtaccgctttttaacatcacaacagctttttaagctgctg
gactgcttattagagtcacatagatttgcaaaagcatttaattccaacaatgaacagagg
actgctctgtggaaagcaggcttcaaaggcaagtccaagcccaatcttctaaaacaggag
acgagcagcctggcctgtgggctgcgcattctcttcaggatgtacatggacgagagcaga
gtcagtgcctgggaagaggtccagcagaggcttctgaacgtctgcagtgaagcgctgagt
tacttcctcacgctcacgtccgaaagtcaccgcgaagcctggactaacttacttttgttg
ttcctgactaaagttctgaagatcagtgataacaggtttaaagctcatgcatcattctac
taccctctcttatgtgaaattatgcaatttgacttgattcctgaacttcgtgctgttctt
agaagatttttcctacgaattggaatagtttttcagatatcacaaccacctgaacaggaa
cttggaataaacaagcagtga
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