Phodopus roborovskii (desert hamster): 127231545
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Entry
127231545 CDS
T08852
Symbol
Trim55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127231545 (Trim55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127231545 (Trim55)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127231545 (Trim55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
T4_Rnl2_C
Motif
Other DBs
NCBI-GeneID:
127231545
NCBI-ProteinID:
XP_051053090
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCASDVFQASNP
YLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSE
QPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAVLV
GTNDRVQGVISQLEDTCKTIEECCRKQKQDLCEKFDYLYGILEERKTEMTQAITRTQEEK
LEHVRALIRKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKISEASKAFQMENV
EQGYEIMNHFTINLNREEKIIREIDFYREEEDEEEAGEIEEEGEGADAAEGEEVESVQIE
SSGEEESPEKASEPSQLSSELQDAPGPVLVSSPEPPSSVAPAADVMVTQGEVVPIGSQQT
TQSETPGPSATETTDPLFYPSWYKGQNRKTISNPPCTPGSEGLGLIGPPGAEDSSVQSAG
VAEAAANEQAAVSGKESSSPAATSQIGFEAPSPQGQASASGSGGGVDSEPSRHVFSFSWL
NSLNE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttctttgaattacaagtctttctccaaagagcagcagaccatggataacttg
gaaaagcaactgatctgtcccatctgcctggagatgttctcgaagcccgtcgtcattctc
ccctgccagcacaacctgtgtaggaaatgtgccagtgacgtcttccaggcctctaaccca
tacttacccacacgaggaggcaccactgtggcatcagggggtcgattccgctgtccctcc
tgcagacacgaggtggtgttagacagacatggggtttatgggcttcagaggaacctgctc
gtggaaaacatcattgatatctacaaacaggaatccaccaggccagaaaaaaagtccgag
cagcccatgtgtgaagagcatgaggaggaacgcatcaacatctactgtctgaactgcgag
gtgcccacctgctccctgtgcaaagtgtttggcgcgcataaggattgccaggtggctccg
cttacccacgtgttccagaggcagaagtcggaactcagtgatggcatcgctgtacttgtg
ggaaccaacgatcgagtccagggagtgatcagccagctggaggatacctgtaaaactatt
gaggaatgctgcaggaagcagaaacaagacctgtgtgagaagtttgattatctctatggc
atcctggaggagaggaagaccgaaatgacccaagccatcacccgaacacaagaggagaaa
ctggagcatgtcagagctcttatcagaaagtattctgatcacctggagaacgtttcaaag
cttgtggagtcggggatccagttcatggatgagccggaaatggcggtgtttttgcagaat
gccaagaccctgttacaaaagatctcggaagcatccaaggcatttcagatggagaacgta
gagcaaggttatgagatcatgaaccacttcaccatcaacctcaatagagaagaaaaaatt
atacgtgaaattgatttttacagagaagaggaagatgaagaggaagcaggagaaatagaa
gaagaaggagaaggagcagatgcagcagaaggagaagaggtagaaagtgttcaaatagag
tcatcaggggaagaagaaagcccggaaaaagcctcagagccctctcagctctcctcagaa
ctccaggatgcccctggaccagtccttgtgtcctctccagaaccgccttcatccgtggca
cctgctgcagatgtcatggtgacacagggggaggtggtgcccattggctctcagcagacc
acacagtctgaaactccaggcccttcagcaacggaaaccacggatcccttgttttaccct
agttggtataaaggccaaaaccggaaaaccatctccaacccaccttgcactcctgggagt
gaaggtctgggactaatagggcctcctggtgctgaggattccagtgtgcagtcagcagga
gtggcagaagccgcagccaatgagcaggcagcagtgagtggtaaggaatctagttcacct
gcagctacctctcagattggatttgaggccccttctccccagggacaggcatcagcctca
gggagtggcggtggggttgactctgagccatctcgacatgtcttctccttctcctggttg
aattccctgaatgaatga
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