Phodopus roborovskii (desert hamster): 127231682
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Entry
127231682 CDS
T08852
Symbol
Ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
prob04514
Cell adhesion molecule (CAM) interaction
prob04517
IgSF CAM signaling
prob05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127231682 (Ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127231682 (Ncam1)
04517 IgSF CAM signaling
127231682 (Ncam1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
127231682 (Ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127231682 (Ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127231682 (Ncam1)
04090 CD molecules [BR:
prob04090
]
127231682 (Ncam1)
00536 Glycosaminoglycan binding proteins [BR:
prob00536
]
127231682 (Ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
prob00537
]
127231682 (Ncam1)
04091 Lectins [BR:
prob04091
]
127231682 (Ncam1)
Membrane trafficking [BR:
prob04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
127231682 (Ncam1)
Cell adhesion molecules [BR:
prob04515
]
Immunoglobulin superfamily
NCAM1/2
127231682 (Ncam1)
CD molecules [BR:
prob04090
]
Proteins
127231682 (Ncam1)
Glycosaminoglycan binding proteins [BR:
prob00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
127231682 (Ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
prob00537
]
Others
127231682 (Ncam1)
Lectins [BR:
prob04091
]
I-type lectins (Siglecs)
127231682 (Ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_6
C1-set
Ig_5
C2-set_3
Ig_VEGFR-1-like_5th
Adeno_E3_CR1
Zwei_Ig_N
V-set_CD47
Ig_PDGFR_d4
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
127231682
NCBI-ProteinID:
XP_051053339
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MLRTTDLIWTLFFLGTAVALQVDIVPSQGEISVGESKFFLCQVAGEAKDKDISWFSPNGE
KLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTGEDGTQSEATVNVKIFQKLMF
KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGF
PEPSMSWTKDGEPIENEEEDDDKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDAS
IHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRP
EKQETLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQ
GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPD
SENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDRVEPYSSTAQVQFDEPEATGGVP
ILKYKAEWKPLGEEMWHFKWYDAKEANMEGIVTIMGLKPETRYAVRLAALNGKGLGEISA
ATEFKTQPVHSPPPLAPANSSALAPLSSRAREPSAPKLEGQMGEDGNSIKVNLIKQDDGG
SPIRHYLVKYRAKLASEWKPEIRLPSGSDHVMLKSLDWNAEYEVSVVAENQQGKSKAAHF
VFKTLAQPTAIPANGSPTTGLSTGAIVGILIVIFVLLLVVMDITCYFLNKCGLLMCIAVN
LCGKAGPGAKGKDMEEGKAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEP
ELPADTTATVEDMLPSVTTVTTNSDTITETFATAQNSPTSETTTLTSSIAPPATAVPDSN
SVPAGQATPSKGSGVTAASSPPASAPKVAPLVDLSDTPTSTPSASNLSSTVLANQGAVLS
PSTPANAGEASKVPPPSKQSPAPTSTPAGAASPLAAVAAPATESLQAKQEAPSTKGPDPE
PTQPGAMKNPPEAATAPASPKSKAASISTTNPSQGEDLKMDEGNFKTPDIDLAKDVFAAL
GSPAPATGASGQASELAPSTADSAMPPAPAKTEKGPVEAKSESQESEAKPAPTEVKTVPN
DATQTKENESKA
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaactacggacctcatctggactttgttttttctggggaccgcagttgccctg
caagtggatattgttcccagccaaggagaaatcagtgttggagagtccaaattcttcctg
tgtcaagtggcaggagaagccaaagataaggatatctcctggttctccccaaatggggaa
aagttgagcccgaaccagcagcggatctcagtggtgtggaacgatgacgactcctctaca
ctcaccatctacaatgccaatattgatgatgctggcatttacaagtgtgtggtcactggc
gaggatggcacccagtccgaggccactgtcaacgtgaagatcttccagaagctcatgttc
aagaatgccccaaccccacaggagttcaaggaaggggaagatgcggtgattgtgtgtgat
gtggtcagctctctgcccccaaccatcatctggaaacacaaaggccgagacgtcatcctg
aaaaaagatgtccgattcatagtcctgtccaacaactacctgcagattcggggcatcaag
aaaacagatgagggcacttaccgctgtgagggcagaatcctggcccggggggagatcaac
ttcaaggacattcaggtcattgtgaatgtaccacccaccgtccaggcaagacagagcatc
gtgaatgccactgccaacctgggccagtctgtcaccctggtgtgtgatgctgatggcttc
ccagagccttccatgagctggacaaaggatggggaacccatagaaaatgaggaggaagat
gatgataagcacatcttcagtgacgacagttctgagctgaccatcaggaacgtggacaaa
aatgatgaagctgagtatgtctgcattgctgagaacaaggctggcgagcaggatgcatcc
atccatctcaaggtctttgcaaagcccaaaatcacctatgtagagaatcagacagccatg
gaactagaggaacaagtcactcttacctgtgaagcctcgggagaccccatcccctccatc
acctggagaacttccacccgaaacatcagcagtgaagaaaaggcttcgtggactcgacca
gagaagcaagagactctggatgggcacatggtggtacgcagccatgctcgtgtgtcctcc
ctgaccctgaagagcatccagtacacagatgctggagaatacatctgcactgccagcaac
accatcggccaggactcccagtccatgtaccttgaagttcaatatgcacccaagcttcag
ggccctgtggctgtgtacacatgggaagggaaccaggtgaacatcacctgtgaggtcttt
gcctacccaagtgccaccatctcctggttccgagatggtcagttgctgccaagctccaac
tacagcaatatcaagatctacaacaccccgtctgctagctacttggaggtaaccccggac
tcagaaaatgactttggaaactacaactgtactgcagtgaaccgcattggacaggagtcc
ttagaattcatcctcgttcaagcagacacaccgtcttctccatccatcgaccgggtggaa
ccatactccagcacagcacaggtgcagtttgatgaaccagaagccacaggtggggtgccc
atcctcaaatacaaggctgagtggaagccactgggtgaagaaatgtggcatttcaagtgg
tatgatgccaaagaagctaacatggaaggcattgtcaccatcatgggcctgaagcctgaa
acaaggtatgcagtacgactggcagccctcaacggcaaggggctgggtgagatcagcgca
gccactgagttcaagacacagccagtccacagtcctcctccactggctcctgctaactct
tccgcccttgctccgttgtcttcacgagctagggaacccagtgcacccaagctggaagga
cagatgggagaggatgggaactccatcaaggtgaacctgatcaagcaggatgacggaggc
tcaccaatcagacactatctggtcaagtacagagcgaagcttgcctctgagtggaaacca
gaaatccggctcccttctggcagtgatcacgtcatgctcaaatccctggactggaacgct
gagtatgaagtatctgtggtagctgagaatcagcaaggaaaatccaaggcagctcatttt
gtgttcaagaccttagcacagcccacagccatcccagccaatggcagccccaccacaggc
ctgagcaccggcgccatcgtgggcatcctcattgtcatcttcgtcctactcctggtggtc
atggacatcacctgctacttcctgaacaagtgtggtctgctcatgtgcattgctgttaac
ctgtgtggcaaagctgggcccggagccaagggaaaagacatggaggagggcaaggctgct
ttctcgaaagatgagtccaaagaacccatcgtggaggtccgaacagaggaggaacggacc
ccaaaccatgacggagggaagcacacagagcccaatgagaccacaccgctgacagagccc
gagctgcctgctgacaccacagccactgtcgaggacatgctgccttctgtcaccaccgtc
accactaactctgacactatcaccgaaacttttgccactgctcagaacagccccaccagt
gagaccactacactgacctccagtattgccccaccggccacagctgtgccggactcaaat
tctgtacccgctggtcaggccaccccttccaaggggtctggtgtcactgctgcatcctca
cccccagcctcggccccaaaggttgctcctcttgttgacctgagtgataccccgacctca
actccctctgctagcaatctgtcctccactgtcctggctaaccaaggagctgtactcagc
cccagcacccctgccaatgcgggggaggcctccaaggtccctccacccagtaagcagtcc
cctgctccaacctccaccccagctggggcggccagccccttagcagcagtagccgcccct
gccacagaatccctccaggccaagcaggaagcccccagcaccaaaggcccggacccagag
cccacccagcctggcgccatgaagaacccacctgaggcagccacagcccctgctagcccg
aagagcaaggctgcctccatcagcaccacaaacccttcccagggcgaggacttaaaaatg
gacgaagggaacttcaagaccccagatattgaccttgcaaaggatgtttttgcagccctg
ggctctcctgctcctgccactggagccagtggacaagcctctgagcttgctccttccact
gcagacagcgctatgccacctgcaccagcaaagaccgagaagggtcctgtagaagcaaag
tctgaatcccaggagtcagaagcaaagccagcaccaactgaagtcaagacggtccccaat
gatgccacacaaacaaaagagaatgagagcaaagcatga
DBGET
integrated database retrieval system
