Phodopus roborovskii (desert hamster): 127231822
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Entry
127231822 CDS
T08852
Symbol
Hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04024
cAMP signaling pathway
prob04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
127231822 (Hcn4)
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
127231822 (Hcn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127231822 (Hcn4)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
127231822 (Hcn4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
127231822
NCBI-ProteinID:
XP_051053568
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All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDGEEEGTGGRQDPSRRSIRLRPLPSPSPSA
AAGCAESRGAALGATDSEGPVRSSTGKSSTNGDCRRFRGSLASLGSRGGGSGGAGSSSSH
GHLHDSAEERRLIAAEGDASPGEDRTPPGLAAEPERPGAAAQPAASPPPQQQPPQPSSTS
CEQPSADTAIKVEGGAAASDQILPEAEVRLGQTGFMQRQFGAMLQPGVNKFSLRMFGSQK
AVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVF
NVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLI
VETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRI
VNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSINGMVNNSWGKQYSYALFKAMSHMLC
IGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYM
SFHKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFAN
ADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYF
GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKN
SILLHKVQHDLNSGVFNYQENEIIQQIVRHDREMAHCAHRVQAAASATPTPTPVIWTPLI
QAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGPGLGNLGAGQTPRHPRRLQSLIPSALG
SASPASSPSQVDTPSSSSFHIQQLAGFSAPPGLSPLLPSSISSPPPGACSSPPAPTPSTS
TAAATTAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQAAQLPPPLPGARGGLGLLEHF
LPPPPSSRSPSSSPGQLGQPPGELSPGLAAGPPSTPETPPRPERPSFMAGASGGASPVAF
TPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRL
TQDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAVGGSGSSGGLGPPGRPY
GAIPGQHVTLPRKTSSGSLPPPLSLFGVRATSSGGTPLTAAPQREPGARSEPVRSKLPSN
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgccgccgtccatgcgcaagcggctctacagcctcccgcagcaggtgggg
gccaaggcgtggatcatggacgaggaagaggatggagaggaggaggggaccgggggccgc
caggacccgagccgcaggagcatccgtctgcgcccactgccctcgccctcaccctcggcg
gccgccggctgcgcggagtcccggggtgcggccctcggggctacagacagcgaggggccg
gtccgcagcagcaccggcaagtctagcaccaatggtgactgcaggcgcttccgcgggagc
ctggcctcgctgggcagccggggtggcggcagcggtggagcagggagcagcagcagtcat
gggcacctgcatgactccgcggaggagcggcggctcattgccgccgagggcgacgcgtcc
cccggcgaggacaggacgcccccgggcctggcggccgagcccgagcgccctggcgccgcg
gcacagcccgcagcctcgccgccgccccagcagcagccgccgcagccgtcctccacctcc
tgtgagcagccctcggcggacaccgctatcaaagtggagggaggcgcggctgccagcgac
cagatcctccccgaggccgaggtgcgcctgggccagaccggcttcatgcagcgtcagttt
ggtgccatgctgcaacctggggtcaacaaattctccctgaggatgtttggcagtcagaaa
gcggtggagcgcgagcaggagagggttaagtcagccgggttttggattatccacccctat
agtgacttcagattttactgggacctaacgatgctgctgctgatggtgggaaatctgatc
atcattcctgtgggcatcaccttcttcaaggatgagaacaccacaccctggattgtcttc
aacgtggtgtcagacacattcttcctcatcgacttggtcctcaacttccgcacagggata
gtggtggaggacaacacagaaatcatccttgacccacaacggattaagatgaagtacttg
aaaagctggtttgtggtggatttcatctcctccatccccgtggactacatcttcctgatt
gtggagactcgcattgactcagaggtctacaagactgccagggctctgcgtattgttcgc
ttcaccaagatcctcagcctcctgcgcctcttacgcctttcccgcctcattcgatatatt
caccagtgggaagagatcttccacatgacctatgacctggccagtgctgtggtacgcatt
gtgaaccttattggcatgatgctcctgctctgccactgggacggctgcctgcagttcctg
gtgcccatgctgcaggactttcctcatgactgctgggtgtccatcaatggcatggtgaat
aactcctgggggaagcagtattcctatgccctcttcaaggccatgagccacatgctgtgc
attgggtatggacggcaggcacctgtaggcatgtctgacgtctggctcaccatgctcagc
atgattgtgggtgccacctgctatgccatgttcatcggccatgccactgccctcatccaa
tctctggattcctcccggcgccagtaccaggagaagtataaacaggtggagcagtacatg
tccttccacaagctcccgcctgacacccggcagcgtatccacgactattatgaacaccgc
taccagggcaagatgtttgatgaggaaagcatcctgggtgaactgagtgagcccctacga
gaggagatcatcaactttaactgccggaagctggttgcctccatgccgctgtttgccaat
gcagaccccaattttgtgacgtccatgctgaccaagttgcgttttgaggtcttccagcct
ggggattatatcatccgagaaggcaccatcggcaagaaaatgtactttatccagcatgga
gttgtcagtgtgctcactaagggcaacaaggaaaccaagctggctgatggctcatatttt
ggagagatctgcttgctgacccggggccggcgcacagccagcgtgagggcggacacttat
tgtcgcctctactcactgagtgtggacaactttaatgaggtgctggaggaatatcccatg
atgcggagggcctttgagactgttgcgctggaccgcctggaccgcataggcaagaagaac
tccatcctcctccacaaggtgcagcatgacctcaactcaggtgtcttcaactaccaagag
aacgagatcatccagcagatcgtgagacatgaccgagagatggcccactgcgctcaccgt
gtccaagctgctgcctcagccaccccaacccccacacctgtcatatggaccccgctgatc
caggcaccgctgcaggctgctgcagcaaccacgtctgtggccatagcccttacacaccac
cctcgcctgcccgccgccatcttccggccccctccaggaccaggactgggcaaccttggg
gctggacagacaccgaggcacccaaggaggctgcagtccctgatcccttcggcgctgggc
tctgcttcaccagccagcagcccatcacaggtggacactccatcttcatcttccttccat
atccaacagctggctggattctctgcacctcctggattgagccctctcttgccctcctct
atctcttccccacctccaggggcctgcagttccccaccagcccccacaccatccacctcc
acagctgctgccaccacagctgggtttggccactttcacaaggcgctaggtggctccctg
tcatcctctgactccccgctgctcaccccactgcagccaggggctcgttccccacaggct
gcccagctgccacccccactgcctggggcccgaggaggcctgggactcctggagcacttc
ttgccgcccccgccctcctctaggtcaccatcgtccagccctgggcagctgggtcagcct
cctggagaattgtccccaggtctggcagctggcccaccaagtacaccagagacaccccca
cggcctgaacggccatccttcatggcaggggcctctgggggtgcttctcctgtagccttt
accccccgaggaggcctcagccctcctggccacagcccaggccccccaagaactttccca
agtgccccaccacgggcctctggttcccatggttccctgctcctgccaccggcctccagt
cctccacctccccaggtcccacagcgcaggggtacgccacccctcacccctggccgcctc
acacaggacctgaagctcatctcagcctctcagccagccctcccccaggatggggcacag
actctccgcagggcctcccctcactcctcaggggagtctatggctgcctttccgctcttt
cccagagctgtgggtggcagcgggagcagtgggggcctggggcctcccgggaggccctat
ggtgccatcccaggccagcatgtcactttgcctcggaagacatcctcaggttctctgccg
cccccactttctttgtttggggtaagagccacctcttctggaggaacccctctgactgct
gcaccccagagggaacctggggctaggtctgagccagtgcgctccaaactgccatctaat
ctatga
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