Phodopus roborovskii (desert hamster): 127231931
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Entry
127231931 CDS
T08852
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04140
Autophagy - animal
prob04211
Longevity regulating pathway
prob05010
Alzheimer disease
prob05014
Amyotrophic lateral sclerosis
prob05016
Huntington disease
prob05017
Spinocerebellar ataxia
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127231931 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
127231931 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
127231931 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
127231931 (Rb1cc1)
05016 Huntington disease
127231931 (Rb1cc1)
05017 Spinocerebellar ataxia
127231931 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
127231931 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prob01009
]
127231931 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127231931 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127231931 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
prob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127231931 (Rb1cc1)
Membrane trafficking [BR:
prob04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127231931 (Rb1cc1)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127231931 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
127231931
NCBI-ProteinID:
XP_051053807
UniProt:
A0AAU9YRB2
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEHEGSEKAEMTRPTEL
VLSPDMPRTTNTSLLTSFHKSVEHVAPDPTDAERGKGLRESCQSTVQQEEASVDAKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFILECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTT
TSPKTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETISHPNTEQTIHQASLDLDSLA
ESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTTARGK
EGFGDRVALHVQLEKCRVAAQDSHVSIQTIKENLCHLRTFVQKEQCDLSNSLKCTAVELR
NTIEKVKCFLEITLKEKYQKELQSLKSEYESKLDALVKDSEENVNKIKKLKGDLVTLEEV
LQKKDNEFALIKDEKEAVVFMQHEKDQKLLEMENILHTQNCEINELKQSREMVLEDLKKL
HVENDKKMESLRAEFQCLEQSHLKELEDTMHVRHTHEFEKVMTDHKVSLEQLKKENQQRI
DEILESHASAIQEKEQQLQELKLKVSDLSDIRCKLAVELALKETETDEIKILLEESRTQQ
KETLKSLLERETENLRTEISKLNQKIHDNNENYQVGLSELRALMTIEKDQCISELISRHE
KESNVLKAELDNVTSLHQQAFEMEKNLKEQIVELQSKLNSELCVLERQKDEKITQQEEKY
EALIQNLEKDKEKLVMNHEQDKEQLIQKLNFEKDEAVQTALNEFKLERELVEKELLEKVK
HLETQIAKSPAFESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLI
AEQQTNFNTVLTREKLRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKL
EEEVSKLRTGGFVSSAPVLAAPELYGACAPELPGDTEGSAVETADEGRVDSAMETSMMSV
QENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLV
LIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQA
KKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactgggaccactctgacatttgatactgagcta
actgtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctagtggtcaatggaggagagtgcatggctgcagatcgaagagtgtgt
acctacagtgctggaacggacacaaatccaatttttctttttaataaggaaatgatcttg
tgtgaccgcgcacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaggagtcccttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaagctttgctctttctgtgaaggccttgtc
catgatgaacatcttcagcaccaaggctgggctgcaatcatggccaatctagaggactgt
tcaaattcataccagaagcttcttttcaaatttgaaagtatttattcagattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttaaatgaacatgaaggctcagagaaagctgagatgacaagacccactgaactg
gtgctctctcctgatatgcctagaacaactaatacatccttgttaacctcatttcacaag
tcagtggagcatgtagctccagatcccactgatgctgaacgtggcaaaggacttagggaa
tcttgtcaaagtactgtccagcaagaagaagcttcagtagatgctaaagacagtgatctg
cctttttttaatgtttccttgttagactggataaatgttcaagatagacctaatgatgtg
gaatctttggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatcttagaatgccatcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggacttgaagatcggctgtatgccctggaccagatgattgctagctgtggccgg
ttggtaaatgaacagaaagagcttgctcagggttttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtattacctgatctgtgcctgagtcacgcaaatcagctaatg
attatgttgcaaaaccacagaaaattgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaatctacatgtcagactgaagtggtgttgttttgtgatgcttcat
gcggatcaagatggagaaaagctgcaagcactgctccgcctggtgatagagctgttagaa
agagtcagaattgttgaggctctcagcacagtccctcagatgtattgcctagctgttgtt
gaggttgtaaggagaaaaatgttcattaaacactacagagagtgggctggtgctttagtc
aaagatgggaagcagttatatgaagccgaaaagtcaaaacgggaatcctttgggaaatta
tttaggaaatcctttttaagaaaccgtctgtttaagggactggactcctggcccccctca
ttttgtactcagaagcctcgaaaatttgactgtgaacttccagacatatcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagtgcagccgttcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggtg
tccacaagtcaggcatccccgcagtcagctgcttctccaaggatagaaagtacaactact
acctcaccaaaaactcctcctcctctaactgttcaagatcccttatgtccagcagtgtgt
cccttagaagaattgtctccagatagcattgatgctcatacatttgattttgaaaccatc
tcccatccaaatacagaacaaactattcaccaagcatcgttagacttggattcattagca
gaaagtcctgagtctgattttatgtctgctgtgaatgagtttgtgattgaagaaaattta
tcgtctccaaaccctataagtgatccacaaagtccagaaatgatggtggagtcactctat
tcatcagtcatcaatgcaatagatagtaggcgcatgcaggacacaactgcacgtggaaaa
gaggggtttggagatcgtgttgctctgcatgtccagctggagaaatgcagagttgctgcc
caagactctcacgtcagcatacaaaccatcaaggaaaatctgtgccacctcagaacattt
gtgcaaaaagaacagtgtgacttatcaaattctttaaaatgtacagcagtagaactaaga
aacactattgaaaaagtaaaatgttttctagaaataacactaaaggaaaaatatcagaaa
gaactccaatctttaaaaagtgagtatgaatctaaacttgatgctctagtaaaagacagt
gaagaaaatgtaaataaaattaaaaagttgaaaggagatttagtaacccttgaggaagtt
ttacaaaagaaagacaatgaatttgctttgataaaagatgaaaaggaagctgttgtcttc
atgcagcatgaaaaggatcagaaattattagaaatggaaaatatcctgcatactcaaaat
tgtgaaattaatgagctaaagcagtcacgagagatggtgttagaagacctgaaaaagctg
catgttgaaaatgataagaaaatggagtcactgagagccgaatttcagtgcttagaacaa
agccacctaaaggaattagaggacacaatgcatgtcaggcacacacatgagtttgagaaa
gttatgacagatcacaaagtgtctttggagcaattaaaaaaggaaaatcaacaaagaatt
gatgagatactagaatctcatgcctccgctatccaggaaaaagaacaacagttgcaggaa
ttgaaactcaaggtttctgatttgtcagacataaggtgtaaattagcagttgaacttgca
ttaaaggaaacagaaactgatgagataaagatcttgttggaagagagcagaacacagcaa
aaggaaactttgaagtctctccttgaacgagagacagagaacttaagaacagaaataagt
aaactaaaccaaaagattcatgataataatgagaattatcaggtgggtttatcagagtta
agagctttaatgacaattgaaaaagatcagtgcatttcagagttaattagcagacatgaa
aaagaatctaatgtacttaaggctgaattagacaatgtaacatctttgcatcaacaagca
tttgaaatggaaaagaacctgaaagaacaaatagttgaactgcaaagcaaattgaactca
gaactgtgtgtgcttgaaagacaaaaagatgaaaaaataacccaacaagaggagaagtat
gaggctcttatccagaaccttgagaaagacaaggagaaattggtcatgaaccacgaacaa
gacaaagaacagttaattcagaagcttaattttgaaaaagacgaagctgttcaaactgca
ctaaatgaatttaagttggagagagaacttgttgaaaaagagttactagaaaaagttaaa
catcttgagactcaaatagccaaaagtcctgcctttgaatcagccagagaagattcgtca
agcctagttgctgaacttcaagagaagcttcaggaagaaaaagctaagtttctagaacag
cttgaagaacaagaaaaaagaaagaatgaggaaatgcaaaatgtccgaacatctttgatt
gctgaacaacagaccaattttaacactgttttaacaagagagaaattgaggaaggaaaac
ataataaatgaccttagtgataagttaaaaagtacaatgcagcaacaagaacgtgacaaa
gatttgatagagtcactttctgaagatcgagctcgcttgctggaagaaaagaaaaagctg
gaagaagaagtgagcaagctgcgcaccggcggttttgtgtcctcggcacctgtgcttgca
gccccggagctgtatggggcttgtgcccctgagctgccaggggacacggaggggtcagcc
gtggagacagcagatgagggaagagtggactccgccatggagacaagcatgatgtctgtc
caagaaaatatgctatctgaagagaaacagaggatcatgcttctagaacggaccttgcag
ttgaaagaagaagaaaacaagcggttaaatcaaagactgatgtctcagagcatgtcctca
gtgtcttcaaggcattctgaaaaaatagccattcgagattttcaggtgggagatttggtt
ctcatcatcctagatgagcgacatgacaattatgtgttgtttactgttagccctactttg
tattttctgcattcagagtctcttcctgccctggatctcaaaccaggtgaaggagcttca
ggtgcatctagaagaccctgggtccttggaaaagtgatggaaaaggaatattgtcaagcc
aaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagggtgaaagct
gtgtcatggaataagaaagtatag
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integrated database retrieval system
