Phodopus roborovskii (desert hamster): 127231979
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Entry
127231979 CDS
T08852
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127231979 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127231979 (Myo5a)
04131 Membrane trafficking [BR:
prob04131
]
127231979 (Myo5a)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127231979 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prob04812
]
127231979 (Myo5a)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127231979 (Myo5a)
mRNA cycle factors
P-body specific factors
127231979 (Myo5a)
Membrane trafficking [BR:
prob04131
]
Others
Actin-binding proteins
Myosins
127231979 (Myo5a)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127231979 (Myo5a)
Cytoskeleton proteins [BR:
prob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127231979 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
DUF5382
nSTAND3
NPHP3_N
MC7
Motif
Other DBs
NCBI-GeneID:
127231979
NCBI-ProteinID:
XP_051053912
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGTDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPMIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHEPLIIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFSWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKMGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLTRVPVKPTKGRPGQMAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRRYKIRRAA
TIVVQSYLRGYLARNRYRKILREHKAVIIQKRVRGWLARTHYKRTMQAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGIYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADKYKQET
EQLVSNLKEENTLLKQEKETLNHLIVEQAKEMTETMERKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDIALRT
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQIMQDELDRKEEQVLRSKAAEEERPPIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRSST
MDYQELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKREDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
SIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQ
IVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFIARV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacaccaagtttgccagggtttggatacctgatcctgaggaa
gtatggaagtcagcagagctgctcaaagattataaacctggagataaagtgctgctgctt
caccttgaggaggggacggatttggaataccgtctagatccaaagaccaaggagctgcct
cacttacggaaccctgacatacttgttggagaaaatgacctcacagccctcagctatctt
catgagcctgctgtgctgcataatctccgggttcgcttcatcgattccaaacttatttat
acatattgtggaatagtcctagtagctataaatccctatgaacaactgcctatttatgga
gaagatattattaatgcatacagtggccagaacatgggtgacatggatcctcacatcttt
gcagtagctgaagaggcttataagcaaatggcaagggatgaacgaaatcagtccatcatt
gtaagtggagagtctggagcaggaaagacagtttcagccaagtatgctatgcggtacttt
gcaactgtaagtggttctgccagtgaggccaatgttgaggaaaaggtcttggcctccaac
cccattatggagtcaattggaaatgctaaaacaaccaggaatgataatagcagccgattt
gggaaatatattgaaatcggttttgataagagataccgaatcatcggtgccaacatgaga
acttaccttttagagaaatccagagtggtattccaggcagaagaggagagaaactaccat
atcttctaccagctctgtgcttcagcaaagttgcctgaatttaaaatgctgcgattagga
aatgcagatagttttcactacacgaagcaaggaggcagccctatgattgaaggagtggat
gatgcgaaggagatggcacacaccaggcaggcctgcactctactgggaattagtgaatct
tatcaaatgggaatttttcgaatacttgctggcatccttcacttaggcaatgttggattt
gcgtctcgagattcagacagctgcacaatacctcccaagcacgagccacttatcatcttc
tgtgacctcatgggtgtggattatgaagagatgtgtcactggctctgccaccgaaagttg
gctactgccacagagacatatatcaagcccatctccaagctgcaggccacaaatgcacga
gatgctttagcaaagcacatctatgcaaaactctttagctggattgtagaccatgtcaac
caggctctccattctgctgtcaagcagcactctttcattggtgtgctggatatttatgga
tttgaaacatttgagataaatagttttgaacagttctgcataaattatgcaaatgaaaaa
ctacagcaacaattcaacatgcatgtcttcaaattggagcaggaggaatatatgaaggaa
caaattccgtggacactcatagatttctatgataatcaaccttgtatcaatcttatagaa
tctaaaatgggcattctagatttgctggatgaggaatgtaagatgcctaaaggcactgat
gatacatgggcccaaaagttgtacaacacacatttgaacaaatgtgccctctttgagaag
ccccgtatgtcaaacaaagcctttatcatcaaacattttgctgacaaagtggagtaccag
tgtgaaggctttcttgaaaagaataaagacaccgtttttgaagaacaaattaaagtcctt
aagtcaagcaagtttaagatgctaccagagctatttcaagatgatgagaaagccatcagt
cccacctccgccacctcatcagggcgcacacctctcactcgagttcctgtaaagcccacc
aagggccgacctggccagatggcgaaagaacacaagaaaaccgtaggacatcagtttcgg
aactcccttcacctgcttatggaaacccttaacgccacgactcctcactatgtacgctgc
attaagcctaatgatttcaagtttccattcacatttgatgagaagagggcagtgcagcaa
ctgagagcatgtggtgtcctggagaccatccgaatcagtgccgcaggctttccctcacgg
tggacttatcaggagtttttcagccggtatcgggtcctaatgaagcaaaaagatgtgctg
ggagatagaaagcaaacatgcaagaatgtattagagaaactgatattggacaaggacaaa
taccagtttggtaagacaaagatctttttccgtgctggtcaagtggcctatctagaaaaa
ctgagggcagacaaactgagggctgcctgcatccgaatccagaagaccatccgtgggtgg
ctgctaaggaagaaatacctgtgtatgcagagggcagccatcacagtgcagcgatacgtg
cggggctatcaggctcgatgctatgctaagtttctgcgcagaaccaaggcagcaaccacc
attcaaaagtactggcgcatgtatgtggtccgcaggaggtacaagattcgacgagctgcc
accattgttgttcagtcttatttgagaggctatttggcaagaaataggtatcgcaagata
ctccgtgagcacaaagcagtcatcattcagaaacgtgtccgtggctggctggctcgtacg
cattataagaggaccatgcaagccatcatctaccttcagtgctgcttccggaggatgatg
gccaagcgtgagctgaagaaactgaaaattgaggctcgctctgtggagcgctacaagaag
ctccacattggcatggaaaacaagattatgcagctacagcgcaaagtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctggaaggaatatacaattctgag
actgaaaaactacgaaatgatgtagaacgtcttcagttaagtgaggaagaagctaaggtt
gccactgggagggtccttagtctacaggaagaaattgctaaactccgcaaagacctggaa
caaactcgatcagagaaaaaatccattgaagaacgagcagataaatacaaacaagaaact
gagcagctggtgtcaaatttgaaggaagaaaacactttgctgaagcaggaaaaggaaacc
ctcaatcacctcattgtggagcaggctaaggaaatgacagaaactatggaaaggaagtta
gtagaagagacaaaacagctggagcttgacctgaatgatgagaggttgaggtatcagaac
cttctgaatgagttcagtcgtctggaggagcgctatgatgacctcaaggaggagatgacc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctacccacagcagtaat
gagtctgagtacaccttcagctctgaatttgcagaaactgaagacattgcactaaggaca
gaggagccaagtgagaagaaggtgcctctggacatgtcgttgttccttaagctccagaag
cgcgtcacggagctggaacaggagaagcagataatgcaggatgagctggaccgaaaggag
gagcaggtgttgcgcagcaaggcagcggaagaagaaaggccaccaattagaggtgcagaa
ctggaatatgagtccctcaagcgtcaagaactggaatcagaaaacaaaaaactgaaaaat
gagctgaacgagttgcgcaaagccctcagtgagaagagcgccccagaagtgacagcgccc
ggtgcacctgcctaccgtgtcctcatggaacagctgacctctgtgagcgaggagctcgat
gtccgaaaggaggaagtcctgatcttgcggtctcagctggtgagccagaaagaagccatc
caacccaagaatacaatgacagattccacaatacttctggaagatgtacagaaaatgaaa
gacaaaggtgaaatagcacaagcatatattggtttgaaagaaacaaacagatcatctact
atggattaccaggagttgaatgaggatggagaactctggctggtttatgaagggttaaaa
caagccaacaggcttttggaatcccagctacagtctcagaagaggagccatgagaatgag
gcagaggccctccgtggggagatccagagcctaaaggaagaaaacaaccggcaacagcag
ctgctggcccagaacctgcagctgccccccgaggcccgcattgaggccagcctgcagcat
gagatcacacggctgaccaatgaaaacctgtattttgaggaattatatgcagatgaccct
aagaagtatcaatcatatcggatttcactttacaaaaggatgattgacttgatggaacaa
cttgaaaagcaggataaaactgtccgaaaactgaaaaaacaactgaaggtctttgccaaa
aaaattggtgaactagaagtgggtcagatggagaacatatctccaggacagatcattgat
gagcctatccggccagtcaacattccccggaaagaaaaggatttccaaggaatgctggag
tacaaaagggaggacgagcagaagcttgttaagaacctgattctagaattgaagccacgt
ggtgtggctgtcaatctgattccagggttaccagcatatatcttatttatgtgtgtgcga
catgctgactacctgaacgatgaccagaaagtaagatcactgctgacatcaacaattaac
agcatcaaaaaagtcttgaagaaaagaggtgacgattttgaaactgtctccttctggctc
tctaacacgtgcagatttttgcactgtttgaagcaatacagtggagaagagggcttcatg
aaacacaacacatctcgccagaatgaacactgcctcaccaattttgaccttgctgaatat
cggcaagtgctgagcgacttggccattcagatctaccagcagcttgtgagggtgttagag
aacatccttcagccaatgatagtctcaggcatgctagagcatgaaacaattcagggtgta
tccggggtgaagcccacagggctcagaaagcgaacctccagtatcgcagacgagggcacc
tacacactggactccatcctgcggcagctcaactccttccattccgtcatgtgtcagcat
ggcatggacccagagctaatcaagcaggtggtcaagcagatgttctacattgtgggtgcc
atcaccctaaacaacctccttctgcgcaaggatatgtgctcttggagcaaaggcatgcag
atcaggtacaatgtcagtcaattggaagaatggctgcgtgacaagaatctaatgaacagc
ggggccaaagagaccctggaacccctcattcaggccgctcagcttttgcaagtgaagaag
aaaactgatgatgatgcggaagctatctgctccatgtgcaatgccctgaccaccgcccag
atcgtcaaggtattgaatctgtacacacccgttaatgagtttgaagaaagagtctctgtt
tcattcatacgtactatacagatgcggttacgagacaggaaagactctccgcagctgctc
atggatgctaaacacatctttcctgtcacctttccctttaacccatcctccctggcccta
gaaaccatccagatcccagccagcctaggcttgggcttcattgcacgggtctga
DBGET
integrated database retrieval system
