Phodopus roborovskii (desert hamster): 127231980
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Entry
127231980 CDS
T08852
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127231980 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127231980 (Myo5c)
04131 Membrane trafficking [BR:
prob04131
]
127231980 (Myo5c)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127231980 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prob04812
]
127231980 (Myo5c)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127231980 (Myo5c)
mRNA cycle factors
P-body specific factors
127231980 (Myo5c)
Membrane trafficking [BR:
prob04131
]
Others
Actin-binding proteins
Myosins
127231980 (Myo5c)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127231980 (Myo5c)
Cytoskeleton proteins [BR:
prob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127231980 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
NPHP3_N
AAA_16
AAA_22
DUF6026
Motif
Other DBs
NCBI-GeneID:
127231980
NCBI-ProteinID:
XP_051053913
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYRVGDRVLRLLLEDGMELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCACAQQPEFKHLKLGSAEEFNYTRMGGNIVIEGVNDR
ADMAETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQVTTVGNERSSVREDDGHLKVFCE
LLGLETSKVAQWLCNRKIVTSSETVVKPMTRPQAINARDALAKKIYAHLFDFIVERINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQHQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRASKFHLCATFFQENPVSSSPF
GAAITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDGKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLSDKKEVCKVA
LHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIMIQKHVRGWLQRKRFLRER
QAALTIQKYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAY
TRGFLARRQYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QGRENHGLVEKLTSLAAVRAGDLERIQKLEAELERAASHRHSYEEKGRRYRDTVEERLSK
LQKHNAELVLQKEQAELTLQEKTEELKEKMDKLTRQLFDDVQKEEQQRLLLEKSFELKIQ
AYEKQIESLREEIKALKDERMQLHHELEEELVASDSLKAEVARLSKQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMRERMSEITKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETGINESIRHE
VTRLTSENMMIPDFKQQIAELERQKQDLESRLKEQTEKMEGRLEEPFSHLTRAREDEAMQ
GKAVEAKGRERPMDKIQELQEAGEFPKKQPEAEGEEASQLSLENRDLEEELDMKDRVIKK
LQDQVKTLTKTIEKANDVHLPSGPKEYLGMLEYKKEDEAKIIQNLILDLKPRGVVVNMIP
GLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHFEDLEMLSFWLSNTCHFLN
CLKQYSGEEEFMKYNSPQQNKNCLNNFDLTEYRQILSDVAIRIYHQFIVVMENSIQPIIV
PGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYSTMCQNGLDPELVR
QAVKQLFYLIGAVTLNSLLLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSSAKETLEP
LSQAAWLLQVKKTTDNDAKEISECCTSLSAVQIIKILNSYTPIDDFEKRVAPSFVRKVQA
LLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLSFLRRL
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctacgcgcagtacaacagggtttggatccctgatcctgaagaa
gtttggaagtcagctgaaattgcaaaggactacagagttggtgaccgagtcctccgactc
ctgctagaggatggaatggagctggactaccctgttgacccagggtcactgcctccgctt
aggaacccggacatccttgtgggtgagaatgacctcacagccctcagctacctccacgag
ccggcagtgctgcataacctcagaatccgctttgcagagtccaagctcatctatacctac
agtggaatcatcttggtggccatgaatccttacaaacagctgccaatttatggggatgcc
atcatccatgcctacagtggacagaacatgggcgacatggacccacacatctttgcagtc
gcagaggaggcctacaagcagatggccaggaacaataaaaatcagtccataatcgtgagc
ggggagtcgggagccgggaagacagtttctgcacgctatgccatgaggtactttgccact
gtcagcaaatccagcagcaacacccacgtggaggacaaagtcctggcatccaatcccatc
actgaggctattggaaatgccaagactacccgcaatgacaacagcagtcggtttgggaaa
tacacagaaatcagctttgatgagagaaatcagatcattggtgccaatatgagaacctac
ctcctggagaaatccagagttgtttttcagtcagaaaacgaacggaattaccacatcttc
tatcagctttgtgcgtgcgcccaacagccggaatttaaacatcttaaactagggagtgct
gaagagttcaactacaccagaatgggaggtaacattgtcattgaaggtgtaaatgacaga
gctgacatggcagagacgcagaagaccttcacactactgggtttcaaggaagattttcag
atggatgttttcaagatccttgctgccatcctacatctgggtaacgtgcaggtcaccacc
gtgggcaacgagaggtcttcagtacgtgaggatgacggtcacctgaaggtgttctgtgaa
ctcttgggcctggagactagcaaagtggctcagtggctatgcaatagaaaaatcgtgact
tcctcagagactgtggtaaagcccatgaccaggcctcaggccatcaatgccagggatgca
ctggccaaaaagatctatgctcacctgttcgacttcattgtagagagaatcaaccaggcg
ctgcacttctcaggcaagcagcacacctttattggcgttttggacatttatggttttgag
acctttgatgtcaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcag
catcagtttaacctgcatgtctttaaacttgagcaagaagaatacatgaaggaagacatc
ccttggactctgatagacttctatgacaaccaacctgttattgacctgattgaagcaaaa
atgggcattttggagttgttggatgaagaatgcttgttgcctcatggaaccgatgaaaac
tggcttcaaaagctgtacaacaattttgtcaataagaattctttatttgaaaagcccaga
atgtcaaacacatccttcatcatccagcacttcgctgacaaggtggaataccagtgtgaa
ggcttcttggagaagaacagagacactgtctatgacatgctggttgaaatcctcagagca
agcaagtttcatctctgcgccacgtttttccaagaaaaccctgtttcatcttctcccttt
ggtgcagcgatcacagttaaatctgcaaagcaagtcatcaagccaaacagcaagcacttc
cggaccacagtcgggagtaagttccgcagctctctgtacttgctcatggaaaccctcaat
gccaccacaccccactatgttcggtgcatcaagccaaatgatgggaagctgccctttgag
tttgactccaaacgaatcgtccagcagctgcgagcctgtggtgttttagaaacgattcgc
atcagtgcccagagctacccttccagatggacatacctcgagttctacagtcgctatggc
atccttatgacccagcaggagctgtccctcagtgataagaaggaggtgtgcaaggtggct
ttgcacaggctcatccaggattctaaccaataccagtttggtagaaccaaaattttcttc
agagcaggacaggtggcttatttagagaaactccgcttggataaactgaggcaggattgc
attatgattcaaaagcatgtacgaggctggctgcagaggaagagattcctccgagagaga
caagctgccctgacaatccagaagtacttccggggtcagcagacagtgaggaaggccatc
actgccaccgctttgaaggaggcctgggcagccatcatcctccagaagcattgccgaggg
tacctggtccgaaacctgtaccagctgatccgagtggccaccatcaccatccaggcctac
accaggggcttcctggccaggaggcagtaccgcaagttgctgcaggaacacaaagctgtg
atccttcagaagtacgcaagggcatggctggcccggcgcaggttccagaacatccgcagg
tttgtgctcaacatccagctgacttacagggtccagcgtttgcagaagaagctggaggac
cagggcagagagaaccacggactggtggagaagctgaccagcctggctgctgtgcgggct
ggcgacctggaaaggattcagaagctggaagcagagctggaaagagcagccagccatcgg
cacagctatgaagagaagggcaggagatacagggacaccgtggaggagagattgtcaaag
ctgcagaagcacaatgcggagctggtgttgcagaaagagcaagcagagctgacgctgcaa
gagaagaccgaggagctgaaagaaaaaatggacaagctcaccaggcagctcttcgatgac
gtgcaaaaagaggaacagcaaaggctgcttcttgaaaaaagctttgagctgaaaatacaa
gcctatgagaagcagatagagtctctgagagaagaaattaaagccctcaaggatgagcgg
atgcagctccatcatgagctggaggaagaactggtcgcctctgacagcctgaaggcagag
gtggctcgcctgagcaagcaggctaagaccatctctgagtttgagaaggagatagagctg
ttgcaggcccagaagatagatgtggaaaaacatgtgcagtcacagaaacgagagatgaga
gaacgtatgtcagagatcaccaaacagcttctggagagctatgacattgaagacgttaga
agcaggctctctgtggaagatctggaacacttaaatgaagatggagaactttggtttgcc
tatgaaggactaaagaaagcaacacgtgttctggagagccatttccagtctcagaaggat
tgctacgaaaaagagattgaaggtctgaacttcaaagtagtgcacttgagccaagaaatc
aaccacctgcagaaactgttcagagaagagacgggcatcaatgaaagtatccgtcacgaa
gtcaccaggctgacatcagaaaacatgatgatcccagacttcaagcagcagattgcagag
ctggagaggcagaagcaggatcttgaatcccgcctgaaagaacagacagagaaaatggaa
ggaaggctggaagagccgttcagtcacctaactcgagcccgagaagacgaagcaatgcag
ggcaaggcggtggaagccaaagggagagagaggccaatggataagatccaagaactgcag
gaagctggcgagttcccgaagaagcagccagaagctgaaggagaggaggcctctcagctg
tctctggaaaacagggatcttgaggaagagttggacatgaaggacagagtgattaaaaag
ctacaggatcaagtcaagactttgaccaagaccattgaaaaagccaacgatgtgcacctg
ccctcaggacccaaggagtacctcgggatgctggaatacaagaaagaagacgaggccaag
atcattcaaaacctcatccttgacctgaagccccgaggtgtggtggtaaacatgatcccc
gggctgccagctcacatcctgttcatgtgtgtgcggtatgcagactccctaaacgatgcc
aacatgctcaagtctctcatgaacagcgccattaacggcatcaagcacgtggttaaggaa
cattttgaagatttggagatgctgtccttctggctgtccaacacttgtcatttcctcaac
tgcctgaagcagtacagtggggaagaggaattcatgaagtataacagcccacagcagaat
aagaactgcttgaacaattttgatcttacagaatacagacagattctgagtgatgtggct
attcggatttatcaccagttcatcgttgtgatggaaaacagcatccagccaataatagtg
ccaggcatgctggagtacgagagtctgcagggcatttccggcctgaagcccactggtttc
cggaagcgctcctccagtattgatgacacagatgcctacaccatgacatctgtgctgcag
cagctgagttacttctacagcaccatgtgtcagaatggcctggaccctgagcttgtgagg
caggcggtgaagcagctgttctacctgatcggggccgtgaccctcaacagcctcctcctg
cggaaggacatgtgctcctgcaggaaggggatgcaaatcaggtgcaacatcagctactta
gaagaatggcttaaagataagaatttgcagaacagctcagccaaggagactctagagccc
ctctcccaggcagcctggttgctccaggtcaagaagaccacagacaacgatgccaaggag
atctccgaatgctgcacttccctgtctgccgtgcagatcataaagatcctcaattcatac
acacctatagatgactttgagaaaagagtcgccccatccttcgttcgcaaagtgcaggct
cttctgaataaccggggtgactcatcccagctaatgctggacaccaaatacctatttcaa
gtcacatttcctttcactgcctcaccgcatgccctggagatgacccagatccccagcagc
ttcaagctcagctttctccggagactgtag
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integrated database retrieval system
