KEGG   Phodopus roborovskii (desert hamster): 127232152
Entry
127232152         CDS       T08852                                 
Symbol
Helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prob03400]
    127232152 (Helq)
Enzymes [BR:prob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     127232152 (Helq)
DNA repair and recombination proteins [BR:prob03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    127232152 (Helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 127232152
NCBI-ProteinID: XP_051054073
UniProt: A0AAU9ZU88
LinkDB
Position
Unknown
AA seq 1046 aa
MEDGGARIRRRVSVRKRNRGSLENLCASPCPAELQPAEDLEDEAAAGSRRRKIGSPEPAQ
ENDSEEDMFGGYDSFTENSFLAQVDDLEQKYMQSPELVTDSATKGLSSEGIKNKLSVATM
SCFTDSETTVKSQSGLDVPAGPESENDLLFDVPSSQILYFESMQNSSGNLGERGGNSLQS
PNEEPACSRKERPQQSDDLSKVTASPEPNRRKSVTDRLKSAMTGNATAQTPVFSRSKQLK
ETVLSEEISVAKKAIESPSDDLGPFYSLPSRVRDLYVQLKGIKKLYDWQHTCLTLSSVQK
RNNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAIVQEKISSLSSFGIELGFF
VEEYAGSKGRFPPTKRREKKSLYIATIEKGHNLVNALIETGRISALGLVVVDELHMIGEG
NRGAVLEMTLAKVLYTSKTTQIIGMSATLNNVEDLQEFLKAEYYTSQFRPVELKEYLKVN
DTIYQVDSRAENGMTFSRLLNYKYSDALRKMDPDHLVALVTEVIPNYSCLVFCPSKKNCE
NVAEMLCKFLSKDYLNHRDEEKSQVIKTLRDVGNGKVCPVLKHTIPFGVAYHHSGLTSDE
RKLLEEAYCTGVLCLLTCTSTLAAGVNLPARRVILRAPYVAREFLRRNQYQQMIGRAGRA
GIDTVGESILIVQERDKKQVLELINGPLENCYSHLIEGFSKGIQSLFLSLIGLKIATSLD
GIYQFMSGTFFGVQQKVLLKEKSLWEITVDSLSYLTDKGLLQKESCGDTEHCFRVTKLGQ
ASFKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLVYLTTPYDLVAQTEPDWMVYFRQFSQ
LSPAEQNVAALLGVSESFIGKKASGQAIRKKVDKNIVNRLYLSFVLYSLLKETNVWSVSE
KFNMPRGHIQNLLTGAASFSSCVLHFCEELEEFWVYKALLVELTKKLTYCVKAELIPLME
VTGVLEGRAKQLYSAGYKSVMHLANANPEVLVRTIGHLSRRQAKQIVSSAKMLLHEKAEA
LQGEVEELLRLPPDLPGLGVPNTEET
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggaggacggcggtgcgcgcatccgccggcgcgtgtctgtccgcaagaggaaccgcggc
agcctggagaacctttgtgcgagcccctgcccggccgaactccagcccgccgaggacctg
gaggacgaagcggctgccgggagccgccgccggaaaatcgggagcccggagcccgcccag
gaaaatgacagtgaagaggacatgtttggtggctatgatagctttacagaaaattccttt
ttagctcaagttgacgacctggaacagaaatatatgcaatcacctgaacttgttacagac
tctgccaccaaaggtctttcttcagaaggcatcaaaaacaaactcagtgtcgccaccatg
agctgctttactgactctgaaactaccgtgaagagccagagtggtctagatgtccctgct
ggacccgaatctgaaaatgaccttttatttgatgtgccttcttctcaaattttatacttt
gaaagtatgcagaactcatcaggcaatttgggtgaaagaggtgggaactcacttcagtca
ccaaatgaagaaccggcctgcagccgtaaagagcgaccacagcagagtgatgacctttcc
aaagtcacagcttctccagagcccaacaggaggaagagtgttacagaccgtctaaagagt
gccatgactgggaacgccacggcccaaacaccagtgttttctcggagtaaacaactcaaa
gagactgtcctatctgaggaaatcagtgtcgctaagaaagcaattgagtcaccgtcggat
gatcttggtcctttttattctctacccagcagagtgagagacctttatgttcagttgaaa
ggaatcaaaaaactctatgactggcagcatacttgtctaacattaagttctgtgcaaaaa
aggaataatttaatatactccttgccaacaagtggcgggaaaaccctcgtggctgagatt
ctaatgctacaagaactactctgccgacaaaaagatgttttaatgattcttccctatgtg
gcgatcgtccaggaaaagatttccagtttatcaagttttggtatagaacttggtttcttt
gttgaagaatatgctggaagcaaaggaaggtttcctcccactaaaaggagggaaaagaag
tcattgtatatcgccactatagagaaagggcacaacctggtgaatgccttgattgaaaca
ggaaggatcagcgctctgggtctggttgtcgtcgatgagttgcatatgattggtgaaggg
aaccgtggtgccgtcctggagatgaccctagcaaaagtcctctacactagcaaaacaact
cagattatcggcatgagtgcaacgttaaacaacgtcgaagacctacaggagttccttaaa
gccgaatattacaccagtcagttcagaccagttgaactaaaagagtacctgaaagtaaat
gacacaatataccaggtagacagcagagcagagaatggcatgaccttctcaaggctcctc
aactataagtattctgatgccctgagaaagatggatcctgatcacttggtagcattggtg
acagaagttatccccaactactcctgcctagttttttgtcccagtaagaagaactgtgaa
aatgtagcagaaatgttatgcaaatttttaagcaaggactatctaaaccacagagatgaa
gaaaaatcccaagtgattaaaaccttgagggatgtaggcaatggtaaagtgtgccctgtc
ttgaagcacaccatcccttttggagttgcctatcaccacagtggtctaactagtgatgaa
cggaagcttctggaagaagcctactgcacaggcgtgctctgccttctcacctgcacatcc
accctggcggcaggggtcaatctaccagctcgcagagtcatcctaagggccccctatgtg
gctagagagttcttacggaggaatcagtatcagcagatgattggcagggcgggccgtgct
ggcatcgacactgttggtgagagcattctcatagtgcaagaaagggacaagaaacaggtc
ctggaactgataaacggacccctggaaaattgctacagccatcttattgagggattcagc
aagggaatccagagtttgtttctgtctttaattggtttgaagattgcaacaagtcttgat
ggcatatatcagtttatgagtggtacatttttcggtgttcagcaaaaggtcttattgaaa
gaaaagagtctgtgggaaataactgttgactcactgagctacctgacagacaaaggactt
cttcagaaagagagctgcggtgacacggagcattgcttccgtgtcacaaaactgggccaa
gcgtcttttaagggagcaattgacttggcctattgtgacactctgtacagagacttgaag
aagggtcttgaaggacttgtcctggaaagccttctccatctggtctacctgacaaccccc
tatgaccttgttgctcagactgaacctgactggatggtgtacttcaggcagtttagccaa
ctcagtccagcagagcaaaatgtggctgctcttcttggagtctccgaaagcttcattggg
aagaaggcatcagggcaagccatcagaaagaaggtggacaagaacattgtcaacaggctc
tatctgtcctttgtcctgtattccttgctgaaagaaaccaacgtttggagtgtgtctgag
aagtttaatatgccccggggacacatacaaaacctgctcactggggctgcctccttctca
tcctgtgtgttacatttctgtgaggagctggaggagttttgggtttacaaagccctgttg
gtagaacttaccaagaaactgacgtactgcgtgaaggcggagctaatcccgctcatggaa
gtgaccggtgtcctagagggtcgagcaaagcagttatacagcgcaggttacaaaagtgta
atgcacttggccaatgccaacccagaagtgcttgtgcggacaattggccatctgtccagg
cgccaggccaagcagattgtgtcctcagctaagatgctgttgcatgaaaaggcagaggct
ttgcaaggagaagttgaagaattactgaggttgcctccagacctccctggactgggggtt
cctaacactgaagagacgtga

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