Phodopus roborovskii (desert hamster): 127232159
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Entry
127232159 CDS
T08852
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127232159
09122 Translation
03013 Nucleocytoplasmic transport
127232159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127232159
03041 Spliceosome [BR:
prob03041
]
127232159
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127232159
Spliceosome [BR:
prob03041
]
Complex C
Other components
EJC/TREX
127232159
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127232159
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
127232159
NCBI-ProteinID:
XP_051054081
LinkDB
All DBs
Position
Unknown
AA seq
1601 aa
AA seq
DB search
MLHIPGSVTREEKMAMAPAAVVVPAEWIKNWEKSGRSEFLRLCRILSESKSRDTLACRDF
QQALYELSYHVIRGTLKPEQASNVLSDISEFREDIPLILADIFCILDIETNCLEEKSKRD
HFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLL
REENEGYAKLIVELGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHH
DFFIALLEAYMGMCEPQTLCHILGFKFKFYQEPNGETPSSLYTVAAVLLQFNLIDLDGLY
VHLLPADTCIVNEYKREIVEAKHIVRKLTMVVLPSDKSDEREKEKKKDDKVEKASDNQKL
GLLEALLVIGDWQHAQSIMDRMPPYYAASHKVIALAICNLIHITIEPLYRRVGVPKGAKG
SPINALQNKKSPKPVESFEDLRRDVFSMFCYLGPYLSHDPILLAKVVRIGKSFMKEFQSD
GKQENKEKLEVIFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQW
KNETYHSHPLLVKVKAYTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVLSQI
QKYDNLITPVVDSLKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCG
AVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTAEQLEAMTGGE
QLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVG
KLYDQCHDTLVQFGGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHIS
SKYDELKKSEKGSKQQHKVHKYITACEMVMAPVHEAVVSLHVSKVWEDISPQFYTTFWSL
TMYDLAVPHTSYEREVNKLKIQMKAIDDNQEMPLNKKKKEKERCTALQDKLLEEEKKQME
HVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQK
TPNFSTLLCYDRVFSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNY
PGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVL
TKILPWYPKVLNLGQALERRVHKICQEEKEKKPDLYALAMVYSGQLKSRKSHMIPENEFH
HKDPPPRNAATSMQNGPCSGLQLSIGSISKSDESSTEETDKARERTQCGVKALSKVSSTT
PKGNSNNGNSGSNAKAVKENDKEKGKEKEKEKKEKTLTVTPETRVLGKDNKEKPKEEQPN
KDEKIRETKERMSKSDKDKEKLKKEEKAKDEKFRIIVPNVESKSSQEREKEKEPSKERDL
IKEIKSKENVKGGEKTLLSGSLKSPISRTDNLEPEREKRRKVDSHPSPSHSSTIKDSLIK
LKESSAKLYINHAPLPLCKSKERETDKKDLDKSRERSREREKKDEKDRKDRKRDYSNNDR
EVPLDLVKRRKDENGILGISKHKSESPCESPYPSEKEKEKTKSKSSGKEKGDCFKPEKMD
KLSSGKKESGHDKEKVEKREKWEGCGDKEDKKHHKSSDKHR
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacatcccgggctctgttactcgggaagagaagatggcgatggctccagcagct
gtggtggttcccgccgagtggattaagaactgggagaaatctgggagaagtgagtttttg
cggttatgccggattctcagtgaaagtaaaagccgcgacactctggcttgtagagatttt
cagcaagctctctatgagttgtcataccatgtcattagaggaactttaaagcctgaacag
gcatcaaacgttcttagtgacatcagtgaatttcgtgaagatattccgcttattcttgct
gatatattctgcatcctagatattgagacgaactgtttagaagaaaaaagtaagagagat
cattttacacaattggtattagcatgtttatatttagtttcagacacagttctaaaggaa
cgcttggatccggaaacattggagtcattaggcctaatcaaacaatcacagcagttcaat
caaaaatcagtcaaaatcaagacgaaactcttttataaacagcagaagttcaatttgtta
agagaagaaaatgaaggttatgccaagctgattgttgaattgggacaagatttatctgga
aatattactagtgatttaatcttagaaattctcaaatctttaataggatgcttcaatctg
gatcccaatcgagttttggatatcatcttagaagtgtttgaatgcaggccagaacaccat
gatttctttatagctttattagaagcttacatgggtatgtgtgaaccacaaacactgtgt
catattcttgggttcaaattcaagttttaccaggaaccaaatggtgagactccatcatcc
ttgtacacagttgcagcagtacttctacagtttaatcttattgatttggatggtctttat
gtacaccttcttccagctgatacttgcattgtgaatgaatacaaacgagaaattgtggaa
gctaagcacattgttaggaaacttacaatggttgtattgccttctgacaaaagtgatgaa
cgagagaaagaaaagaaaaaagatgacaaagtagagaaggcatctgacaatcaaaaactt
ggtttgttggaagctttgttagttattggtgattggcagcatgcacagagtattatggat
cgaatgcctccgtactatgcagcatcacataaagtaatagcccttgctatttgcaatctt
atacatataactattgagcctctttaccgaagagttggtgttccaaagggtgctaaaggc
tcacctatcaatgctttacaaaacaagaagtcgccaaagccagtggagagctttgaagac
ttaaggagagatgttttcagtatgttctgctatcttggtccttacctttctcatgatccc
atcttattggcaaaggttgtgcgcataggcaagtcatttatgaaggaatttcagtctgat
gggaaacaagaaaataaagagaagttggaagttatctttagttgcttgcttagcattact
gaccaggtactccttccatctctctctttaatggattgcaatgcgtgtatgtcagaggaa
ctatggggaatgtttaaaacatttccttatcagcatagataccgattatatggtcagtgg
aagaatgagacttaccacagtcacccacttttagtaaaagttaaagcctatacagtagac
agagccaagtacatcatgaagcgtctaaccaaggaaaatgtgaagccttcagggagacaa
attgggaaactgagccacagcaatccaaccattttgtttgattatgtcttgtcacaaata
cagaagtatgataacttaataacacctgtggtagattcattgaaatatctgactgcgttg
aattatgatgttttggcctattgtattatcgaagctttagctaacccagaaaaagaaaga
atgaagcatgatgacacaaccatctcaagctggcttcagagtctggctagtttttgtgga
gcagtttttcgtaaataccctattgatctggctggtcttcttcagtatgtagccaatcaa
ttaaaggcaggcaaaagctttgatttgcttatattgaaagaagtggtacaaaaaatggca
ggaatagaagttactgaggaaatgacagcagagcagctggaggccatgactggtggggag
caactgaaagctgagggtggatattttggccagataagaaacactaaaaaatcttctcag
cgattgaaggatgcgctactggaccatgatcttgcccttcctctttgtttgcttatggct
cagcagaggaatggggtgatctttcaggaaggtggagagaaacatttgaaacttgtagga
aagttgtatgaccagtgtcatgatactttggtacagtttggtgggtttttagcatcaaat
ttaagcacagatgattacataaagagagtgccttcgattgatgtgctgtgtaatgaattt
catacaccccacgatgcagccttttttctgtctaggccaatgtatgcacaccatatttca
tcaaagtatgatgaacttaagaagtcagaaaagggtagtaaacagcagcataaagttcac
aagtacattacagcatgtgagatggtgatggctcctgtccatgaagcagtggtctcctta
catgtttccaaagtatgggaagatatcagccctcagttctataccacattctggtctctg
acaatgtatgaccttgcagttccacataccagctatgaacgagaggttaataaacttaag
atccagatgaaagcaattgatgacaatcaagaaatgcctctgaataaaaagaaaaaagag
aaagagcgctgcactgcccttcaggacaagcttcttgaagaagaaaagaagcaaatggag
catgtacagcgagttctacagagactaaagctggaaaaggataactggctcttagcaaaa
tctactaaaaatgagaccatcacaaagtttctccagttgtgtatatttcctcgatgtatt
ttttcagcaatcgattctgtttactgtgctcattttgttgagttggttcatcagcagaag
actccaaatttctccacacttctctgctatgaccgagttttctctgatataatttacatg
gttgctagctttactgaaaatgaagctagtcgatatgggagatttctttgctgcatgtta
gagactgtgactagatggcatagcgacaggtccacctacgagaaggaatgtgggaactat
ccagggttccttactatattacgagcaactggatttgatggtggaaataaagctgatcag
ttagattatgagaattttcgacatgttgtccataaatggcattataaactaaccaaggca
tcagtacactgcctggagacaggcgaatatactcatatcaggaatatcttgattgtgcta
acaaaaatactgccgtggtaccccaaagttttaaatctgggtcaggcattggaaagaaga
gtgcataaaatctgtcaagaagagaaagaaaagaagccagatctgtatgcactagcaatg
gtttactctgggcagctgaaaagtagaaagtcacacatgattcctgaaaatgaatttcat
cacaaagatcctcctccgagaaatgctgctacaagtatgcaaaatggtccttgtagtggg
ctgcagttgtctataggaagtatatcaaagtcagatgagagcagtactgaggagactgac
aaggcccgggaaaggactcagtgtggtgtgaaagctcttagtaaagtttctagcaccaca
ccaaaagggaattcaaacaatggaaatagtggctccaatgccaaagctgttaaggaaaat
gacaaagagaagggcaaagagaaagaaaaagagaaaaaagaaaagactctaactgttact
ccagagactagggtgcttggtaaagacaataaagaaaaacccaaggaggaacagccaaat
aaagatgaaaagatacgagagaccaaggaaagaatgtctaaatctgacaaagataaggaa
aaattaaagaaggaggaaaaagctaaagatgagaaattcaggatcattgtccccaatgta
gaatcaaaatcctctcaagaaagagaaaaagagaaagagccatccaaagaaagagactta
ataaaggagataaaatcaaaagaaaatgttaaaggaggagaaaaaacactactttctggg
tccttgaaatcacctatttcccgaacagataatttagagcccgaaagagaaaaacgtcgc
aaggttgattcccatccttctccatcacattcttccacaataaaagacagtctcatcaaa
ctcaaggagtcttcagcaaagctctacatcaaccatgctccactaccattgtgtaagagt
aaggagagagaaacggacaagaaagatttggataagtcaagagaaagatccagagaaaga
gagaaaaaagatgaaaaggaccggaaagaccggaaaagggattattcaaacaatgaccgg
gaagtgcccttagacttggtcaaaaggcggaaagatgaaaatggaatattggggatttca
aaacacaaaagtgaaagtccctgcgagtctccttatccaagtgaaaaagagaaagaaaaa
actaagtcaaaatcctcaggcaaagaaaaaggtgattgctttaaacctgaaaagatggat
aagctatccagtgggaagaaggagtctggacatgataaagagaaggtagagaagagagag
aagtgggagggctgtggagataaggaagacaagaagcatcataagtcctcagacaagcac
agataa
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integrated database retrieval system
