Phodopus roborovskii (desert hamster): 127232163
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Entry
127232163 CDS
T08852
Symbol
Pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
prob03037
]
127232163 (Pkd2)
04040 Ion channels [BR:
prob04040
]
127232163 (Pkd2)
Cilium and associated proteins [BR:
prob03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127232163 (Pkd2)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127232163 (Pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
127232163
NCBI-ProteinID:
XP_051054090
UniProt:
A0AAU9ZTA9
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MVNSNRVQPQPPGDAKRSPAPRAPGPGRLAAGGSAVGGGLAVPGGLREQRGLEIEMERIR
QAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEEDDDDEVEGEEGGMVVEMDVEW
RPGSRRSASSSAVSSAGARGRALGSYRGAGHPSGRRRRLEDQGEPGPSPAGGGDPLHRHL
PLDGQPPRVAWAGRLVRGLRGLWGTRLMEESNTNREKYLKSVLRELVTYLLFLIVSCILT
YGMMSSNVYYYTRTLSQLFIDTPVSKTEKTNFRTLSSMEDFWKFTEGAFLDGLYWKAQTG
NHTQADNRTFIFYENLLLGVPRLRQLRVRNGSCSIPQDLRNEIKECYDVYSVRSEDRAPF
GPRNGTAWIYTNEKDLNGSSHWGIITTYSGGGYYLDLSRTREETAAQVAGLRRNFWLDRG
TRATFIDFSVYNANINLFCVVRLLVEFPATGGVVPSWQFQPVKLIRYVTAFDFFLAACEI
IFCFFILYYVVEEILEIRIHRLHYFRSFWNCLDVGIVVLSIVAMVINIYRMSNVEGLLQF
LEDQNTFPNFEHVAYWQIQFNNIAAVMVFLVWIKLFKFISFNRTMSQLTTTMSRCAKDLF
GFTVMFLVIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEANRVLGP
LYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKSEMELSDLIKKGYQKALIKLKLK
RNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEREHQQM
RDDLEKEREDLDLEHSSLPRPMSSRSFPRSLDDSEEEDDDDSGHSSRRRGSISSGVSYEE
FQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDERLGRDS
EVHREQMERLVREELERWESDDATSQTGHGLGTQVGLNGQPHPRSSRPPSSQSAEGLEGG
GNGSANVHV
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactccaaccgcgtgcagcctcagccgcccggggatgcgaagcgctcgcccgca
ccgagagccccgggccccggccggctggctgcgggaggctcggcggtgggcggcggcctg
gcggtcccgggaggcctccgggagcagcggggcctggagatcgagatggagcgcatccgg
caggcggctgcgcgggaccctccggccggagcctcggcatccccttctcctccgctctcg
tcgtgctcccggcaggcgtggagccgcgataacccgggcttcgaggccgaggaggaggat
gacgacgacgaggtggaaggggaagaaggaggaatggtggtggagatggacgtggagtgg
cgacccggcagccgcaggtcggcctcctcctcggccgtgagctcggcgggcgcccgcgga
cgagccctggggagctaccggggcgccgggcacccgagcgggaggaggcgccgactagag
gaccagggcgagccgggtcccagccccgcaggcggaggggaccctctgcatcgccatctc
ccgctggatgggcagccaccccgagtggcctgggccggaaggctggtgcgcgggctgcga
ggtctctggggaacaagactcatggaagagagcaacactaaccgggagaaataccttaaa
agtgtgttacgggaactggtcacttacctccttttcctcatagtctcgtgcatcttgacc
tatggcatgatgagctccaatgtgtactactacactcggacattgtcacagcttttcata
gacaccccagtgtctaaaacagagaaaactaacttcagaactctttcttcgatggaggac
ttctggaagttcacagaaggcgccttcctggatgggctgtactggaaggcacagacgggt
aaccacacacaggctgacaaccggaccttcattttttatgagaacctgctgcttggggtg
cctcgcctgcgccagctcagggtcagaaatggatcctgctccatccctcaggacttaaga
aatgaaattaaagaatgctatgacgtctactctgtgaggagtgaggacagggctccattt
ggaccacgaaatggaactgcgtggatctacacgaatgagaaggacttgaatgggagcagc
cactggggaatcattacaacctacagcggagggggctattatctggatctgtccagaacc
agggaggaaacagctgctcaggttgcaggcctccggagaaacttctggctggacaggggg
acccgagcaactttcattgacttttcagtgtacaacgcgaacattaacctgttctgtgtg
gtcaggttactggttgagttcccagcgacaggtggtgtggtgccctcttggcagtttcag
cctgtgaaactgatccgctacgtcacagcttttgatttcttcctggcagcctgtgagatt
atcttttgtttctttatcctttactatgtggtggaagagatattggagattcggattcac
agactgcactatttcaggagtttctggaattgtctggatgttgggattgttgtgttatcc
atagtagctatggtcattaacatttaccgaatgtcaaatgtagagggtctactacagttt
ctcgaggatcaaaatactttccccaactttgagcatgtggcatactggcaaatacagttc
aacaatatagctgcggtcatggtatttttggtctggattaagctcttcaaattcatcagc
tttaacaggaccatgagccagctcaccacaaccatgtctagatgtgccaaagacctcttt
ggtttcaccgttatgttcctcgtcattttcctggcgtacgctcagctggcataccttgtc
tttggcactcaggttgatgacttcagtactttccaagaatgtatcttcactcagtttcga
atcattttgggtgacatcaacttcgcggagattgaggaagctaaccgggttttgggacca
ctttatttcactacatttgtgttctttatgttcttcattcttttgaatatgtttttggcc
atcatcaatgatacttactctgaagtgaaatcggatctggcccagcagaaatcggaaatg
gaactctcagaccttatcaaaaagggctaccaaaaagcattgatcaaactaaaacttaaa
aggaatactgtagatgatatttcagagagtctacggcaaggtgggggcaagttaaacttt
gatgagcttcgacaggacctgaaagggaaaggccacactgatgcagaaattgaggccata
ttcactaaatatgaccaggatggcgatcaggaactgacggaacgtgagcatcaacagatg
agagatgatttggagaaagagagggaggacctggacttggaacacagctctttaccacgt
cccatgagtagtagaagtttcccaagaagcctggatgactctgaggaggaggatgacgat
gacagtgggcatagctccaggaggaggggcagcatctccagtggggtttcctatgaggag
ttccaggtactggtgaggcgcgtggaccgcatggagcattccataggcagcatcgtgtct
aagattgatgctgtgattgtcaagcttgagatcatggagagggccaagctgaagaggcga
gaggtgttagggagactgctggatggagtggctgaggatgagagactgggtcgagacagt
gaagtccacagggagcagatggagcgcctggtaagggaagagttggaacgctgggaatcg
gatgatgcaacatcccagacaggtcatggtctaggcacacaagtaggactcaatggtcag
cctcaccccagaagttccaggcctccttcctcccagtctgccgagggcctggaagggggt
ggaaacggaagcgccaatgtccatgtgtaa
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