KEGG   Phodopus roborovskii (desert hamster): 127232213
Entry
127232213         CDS       T08852                                 
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03013  Nucleocytoplasmic transport
prob05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127232213 (Nup54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    127232213 (Nup54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prob03019]
    127232213 (Nup54)
Messenger RNA biogenesis [BR:prob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127232213 (Nup54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 127232213
NCBI-ProteinID: XP_051054166
LinkDB
Position
Unknown
AA seq 564 aa
MAFNFGAPSGTSGTSAATAAPAGFGGLETANSTAGGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLTSAGGFGGFGTTTTTAGSAFSFSAPTNTGSTGLLGGTQNKGFGFGTG
FGTTTGTGTGLGTGLGTGLGFGGFNTQPQQQQQQTTLGGLFSQPTQAPAQSNQLINTASA
LSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPN
NKDEDGLVVLVFNKKEADIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIY
VVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAG
VDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQK
NQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNA
PTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKD
DLEDIKLVEHGLNETIHSRGGVFS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggctttcaattttggggctccttcgggcacttcgggcacctctgcagctaccgcggca
cccgcgggatttggtgggcttgagactgccaactccaccgccggtggttttaattttggg
ggtttcggattaactgctaaccctgcagtgaactttaatattgggaatttcggtgtgtct
accacctcggcgactccattcaattttggtaacagtctgacgagtgcaggtgggtttgga
ggatttggaacaacaactacaactgcaggttctgcattcagcttttctgccccaacaaac
acaggcagtacaggccttcttggtggcactcagaacaaaggttttggctttggtactggt
ttcggcacaacgacaggaactggtactggtttaggtactggtttgggaaccggcctggga
tttggaggatttaatacacagccgcagcagcagcagcagcagactactctaggtggtctc
ttcagtcagcctacacaggctcctgcccaatccaaccagctgatcaatactgccagtgcc
ctttctgctccaacgttactgggagatgagagagatgccattttggcaaagtggaaccag
cttcaggctttctggggaacaggaaagggctatttcaacaataacatccctcccgtggag
tttacacaggaaaaccccttttgccgatttaaggctgtaggttatagttgtatgcccaat
aataaagatgaagatggactagtggtcttagttttcaacaaaaaggaagcagatattaga
agccaacaacaacagctggtagaatcattgcataaggttttgggaggaaaccagaccctt
actgtcaatgtggaaggcattaagacactgccagatgatcagacagaagttgtcatttat
gttgttgagcgttctccaaatggcacctcgagaagggttccagcaacaaccctgtatgcc
cactttgagcaagctaacattaaaacacagctgcagcaacttggggtgacactttctatg
accagaacagaactgtcccctgctcagatcaaacagctcttgcagaaccctcctgcaggt
gttgatcctattatttgggaacaagccaaggtggataaccccgattctgaaaaattaatc
ccagtgccaatggtgggcttcaaagaactgcttcgaagactgaaggttcaagaccagatg
accaagcagcatcagaccagattggatatcatatctgaagatatcagtgagctacaaaag
aatcaaactacaactatggccaaaatagcacagtacaagaggaagctcatggatctctcc
cacagaaccttacaggtcctaattaaacaggagattcaaaggaagagtggctacgccatc
caggctgacgaagaacagcttcgggttcagctggacactatccagggggaactgaatgca
cctactcagttcaaaggtcgactaaatgaactgatgtcccagatccggatgcagaatcat
tttggagctgttaaatctgaagaaaggtattacatagatgcagacctgttacgggagatt
aagcagcatttgaaacaacaacaagaaggcctcagccacttgattagcatcataaaagat
gacctagaagatataaaactggtagaacatggattgaatgaaaccatccatagcagaggc
ggtgtctttagctga

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