Phodopus roborovskii (desert hamster): 127232346
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Entry
127232346 CDS
T08852
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03030
DNA replication
prob03410
Base excision repair
prob03420
Nucleotide excision repair
prob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127232346 (Rfc1)
03410 Base excision repair
127232346 (Rfc1)
03420 Nucleotide excision repair
127232346 (Rfc1)
03430 Mismatch repair
127232346 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prob03032
]
127232346 (Rfc1)
03400 DNA repair and recombination proteins [BR:
prob03400
]
127232346 (Rfc1)
DNA replication proteins [BR:
prob03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127232346 (Rfc1)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127232346 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
RuvB_N
AAA_14
Rad17
AAA_5
AAA_22
AAA_17
AAA_30
AAA_16
AAA_33
AAA_7
Zeta_toxin
nSTAND3
AAA_18
NTPase_1
RNA_helicase
NPHP3_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
127232346
NCBI-ProteinID:
XP_051054367
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MDIRKFFGVISSGKKPVSETAKKNEKIKPSEGTVRGKKGVKEVKVNNSCKEDASKPKQHS
KKKRIIYDSDSESEETVQVKNAKKKPEKLPLSSKPGKISRKDPVTYVSETDEDDDFVCKK
AASKSKENGVSTNSYLGVSNMKKNEENPKTKNKPLSPIKLTPTSVLDYFGTESVQRSGKK
MVASKRKESSQNTDDSSLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
DRKDPEEGESFSPVQADISKAESHKNSNKEHCLNESKTCSPAKCSKGGSSKGSEQPCRSS
AHQKEACSSPKASSKLALMKAKKESSYKDTELMASRRKESTIELKGEKQTPKKTKSSPVK
KESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIER
EEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTMP
GKKSKYEIAAEAEMKKEKSKLEQTPKKHEQGKRKTSPTKKESASKKSKLTPQRNSPAKAI
KKEADVSRRGLNFLEQVVKETPRNSNAQAPAEDSSGNKVESLLWVDKYKPTSLKNIIGQQ
GDQSCANKLLRWLRNWHKSSPEEKKHAARFGKLSSKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYTSGGTPSVSSKHALIMDEV
DGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKS
AMLSVAFKEGLKIPPPAMNEIILGANQDIRQVLHNMSMWSAQNKALTYDQAKADSQRAKK
DIRLGPFDVARKVFAAGEDTAHMTLMDKLDLFFHDYSIAPLFVQENYLHVKPLAAGGDMK
KHLMLLSRAADSICDGDLVDNQIRSKQNWSLLPTQAIYASVLPGELMRGYMAQFPTFPSW
LGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNIDYLSHIRDALVGPLASHGAEGVQHVV
TLMDTYYLMREDFENIMEVSSWGGKPSPFSRLDPKVKAAFTRAYNKEVHLTPYSLQAVKT
PRLSTGPTLDSEYHEESQEDDSQPDEKEQDAIETDAMIKKKTRSSNPSKPEKDKESKKGK
RRSWKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggggttatatcaagtggaaaaaagcctgtgagtgagacg
gcaaagaagaatgagaaaataaaaccttcagagggaactgtcagaggaaagaagggagtg
aaggaagtcaaggttaataattcttgtaaagaagatgcctccaaaccaaagcaacacagc
aagaaaaagaggatcatctatgattcagattcagaatcagaagagacagtgcaggtaaaa
aatgctaaaaagaaaccagagaaactgccactgtcttctaaacctggtaaaatttctcgg
aaggatcctgttacttatgtttctgagacagatgaagacgatgactttgtatgtaaaaag
gcagcctccaaatcaaaagagaatggagtatctacaaacagttaccttggtgtatcaaac
atgaaaaagaatgaagaaaaccctaagactaagaataaacctttgtcaccaataaaactt
acaccaacgtcagtgctagattattttggaactgaaagtgttcagagatctggtaagaag
atggtggcaagcaaaagaaaagagtcttctcaaaacacagatgattccagtttaaatgat
gaggccatcgccaagcagttgcagcttgatgaagatgcagagctggagagacagttacat
gaagatgaagagtttgctcgaacattagccatgttggatgaagaacccaaaaccaaaaag
gaccgaaaggaccctgaagagggagaatcattttcacctgtccaagctgatataagcaaa
gcagaaagccataaaaactctaataaagaacattgcttaaatgaaagcaagacctgcagc
cctgctaagtgcagcaaaggtgggagctccaaaggatctgagcagccctgtagatcgtca
gctcatcagaaggaagcctgttcttctcccaaggccagctccaagctggcacttatgaaa
gcaaaaaaagaaagttcttacaaagacacagaacttatggcctcaagaagaaaagaaagc
accattgaactcaaaggagagaaacaaactcccaagaaaaccaaaagttctccagttaaa
aaagagtctgtaagtccagaagattctgaaaagaagcgcactaattatcaagcttatcga
agctacttaaatcgtgaaggtcccaaagctctgggctccaaagaaatacccaagggagct
gaaaattgcttggaaggcctgacatttgtgatcacaggagtgctggagtccattgaacga
gaagaagccaagtctttaattgaacgttatggggggaaagtaacaggaaatgtgagcaag
aaaaccaactatctggtcatgggccgggacagtggacagtccaagagtgacaaggcagca
gctttgggaacaaaaattcttgatgaagatggtctgttggatctgattcgaactatgcca
ggcaagaaatccaagtatgaaatagctgctgaagctgagatgaagaaagaaaagtccaaa
ttggagcaaacacccaaaaaacatgagcaaggaaaaagaaaaactagtccaactaagaag
gagtcagcgtctaaaaagagcaaactgactccccaaaggaacagccctgcaaaagccata
aagaaggaagcagatgtgtctcggaggggcctgaacttcttggagcaggtagtcaaggag
acgcctcgaaacagcaatgctcaggctccggctgaggacagcagtgggaacaaagtagaa
agcctgctctgggtggataagtataagcccacatcactcaagaacataattggacagcaa
ggtgaccagagctgtgccaacaaactgctacgctggcttagaaactggcacaagagttct
ccagaagagaagaaacatgcagcgaggtttggcaaactttccagcaaagatgatggttcc
agtttcaaggcagcactgctgtctggcccaccaggtgttggcaaaactactacagcttct
cttgtgtgtcaggaattgggctacagttacgtggaactaaatgcaagtgatactcggagt
aagaacagtttgaaagcaattgttgctgaatcattgaacaacaccagcatcaaaggcttt
tatacaagcggaggaactccttcagtaagctcgaagcatgctctcatcatggatgaggtc
gatggcatggcaggcaatgaggacaggggaggaattcaggaactaataggcctgataaag
catactaaaattcccatcatttgtatgtgcaatgatagaaatcaccccaaaattcgctct
ttggttcattattgttttgatcttcgtttccaaagacctcgggttgaacagattaagagt
gcaatgttgtctgttgcatttaaagaggggttaaagatcccccctccagccatgaatgaa
attattttgggagctaatcaagatatcagacaggttttgcataatatgagtatgtggagt
gcacaaaataaggcactaacttatgaccaagccaaggctgattctcagagggccaagaag
gatatcagactgggcccgtttgatgttgctcggaaagtgtttgcagctggagaggatact
gcacacatgacactgatggacaaattggatctcttttttcatgactattccatagctccc
ctctttgtccaggagaactacctccatgtaaagcctctggctgcagggggtgacatgaaa
aagcacttgatgcttttaagccgggcagcagacagcatatgtgatggtgacttagtggac
aatcagatccggagtaaacaaaactggagtcttttgcctacacaggccatttatgccagt
gttcttcctggagagttgatgagggggtatatggctcagtttcctaccttcccaagctgg
ctggggaagcactcatctacgggcaaacatgatcggattgttcaggacctagccttgcac
atgagtcttagaacttactccagcaaaaggacggtgaacatagattacctgtcacacatc
agagatgcacttgtgggacccttggcttcacacggggcagaaggagttcaacatgttgtc
acacttatggacacgtactatttgatgagagaagactttgagaatattatggaagttagc
agctggggtggcaagcccagtcccttttccaggctggatcccaaggtgaaagcagccttc
acaagagcatataataaggaggtgcacctgaccccatactcacttcaggcagtaaagaca
ccgagactcagcacaggtcccacactggattctgaataccatgaagagtcacaggaagat
gacagtcagcctgatgagaaagagcaggatgcaatagagactgacgccatgatcaagaaa
aagaccagatcttcaaatccttcaaaaccagaaaaagataaggagtccaaaaaaggaaaa
cgaagaagttggaagaaatga
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integrated database retrieval system
