Phodopus roborovskii (desert hamster): 127232356
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Entry
127232356 CDS
T08852
Symbol
Ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127232356 (Ythdc1)
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127232356 (Ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
127232356
NCBI-ProteinID:
XP_051054375
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSERMESTDSKRQ
KPSIHSRQLISKPPSSSVSNNKRIVSTKGKSITEYKNEEYQRSERNKRLDADRKIRLSSS
SSREPYKTQPEKACLRKRDSERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYG
SDHETGSSGSSDEQGNNTDNEEEGVEEDVEEDEEVDEDAEDDEEVDEDAEEEEEEDEEEE
EEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKE
RKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFLI
KSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSESH
HGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEI
ELECGTQLCLLFPPDESIDLYQLIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRPEDY
DIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDSFTNLIPNRRFSGVRRDVFLNGSYNDY
VREFHNMGPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRDKR
VHDYDMRVDDFLRRTQAVVSGRRSRPRERERERERDRPRDNRRDRERDRGRDRERERICD
RDRDRGERGRYRR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagccgggaggagaaagatggggaacttaatgttttagatgatatttta
actgaagtgccagaacaagatgatgaactgtacaatccagagagtgaacaggataaaaat
gagaaaaaaggatcaaaaagaaaaagtgaacgaatggaatctactgacagcaagcgacag
aagccttccatccattcaaggcagctgatttctaagccaccaagctcatctgttagtaat
aacaaaagaatagttagtacaaaaggaaagtcgattacagaatataaaaatgaggaatat
caaagatctgaaaggaacaagcgtctagatgctgatcgaaaaattcgtctgtcaagtagt
tcttctagagaaccttacaagactcaaccagaaaaagcttgtctgcggaaaagggattct
gaacgaagggccaagtctcctacaccagatggttctgagagaattgggcttgaagttgat
agacgtgcaagcagatccagccagtcttcaaaggaagaagtaaactctgaagaatatggc
tctgatcacgagacagggagcagtggttcttctgatgaacagggcaacaacactgacaat
gaggaggaaggcgtggaagaagatgtggaggaagatgaagaggtagatgaagatgcagaa
gatgatgaggaagtggatgaagatgcagaggaggaggaagaggaggatgaagaggaagaa
gaggaggaagaagaggaagaggaagaatatgaacaggatgagagagatcagaaggaagag
ggaaatgactatgacacccggagtgaagccagtgattctggctctgagtctgtttctttc
acagatggatctgtcagatctggttcagggacggatggatcagatgagaaaaagaaggaa
aggaagagagctcgaggcatatcccctattgtttttgatagaagtggcagctctgcatca
gagtcatatgcaggttcagaaaagaagcatgagaaattatcatcttccgttcgtgctgtc
cgaaaagatcaaaccagtaaactcaaatacgtccttcaggatgcaaggtttttcctcata
aagagtaacaaccatgagaatgtgtctcttgccaaagctaagggtgtatggtccacattg
cctgtaaatgagaagaaattaaatcttgcattcagatctgcaaggagtgttatcttaata
ttttctgtcagagaaagtggaaaatttcaaggttttgccagactgtcttcagaatcacat
catggtggatctcctatacactgggtgcttccagcaggaatgagtgctaaaatgcttgga
ggtgtctttaaaattgactggatttgcaggcgtgaattaccctttactaaatcagctcat
cttaccaatccttggaatgaacataagccagtcaagattgggcgtgatggacaggaaatt
gaacttgaatgtggaacccagctttgtcttctgtttccccctgatgaaagtattgacttg
tatcagctcattcataaaatgcgtcacaagagaagaatgcattctcagcctcgatcaaga
ggacgtccatcccgtcgagaaccagtccgggatgtgggaaggcgtcgaccagaagattat
gatattcataacagcagaaagaaaccaaggattgactatccccctgagtttcaccagaga
ccagggtatttaaaggatccccgataccaggaagttgacagtttcacaaatcttattccc
aacagacgattttcaggagttcgccgagatgtgtttttaaatgggtcctacaatgattat
gtgagggaatttcataacatgggaccaccgcctccttggcaaggaatgcctccgtacccg
ggaatggaacagcctccacaccatccttactaccagcaccatgctccacctcctcaagcc
caccccccttactcaggacaccatcctgtaccacatgaagcaagatacagagataaacga
gtacatgattatgatatgagggtggatgatttccttcgccgcacacaagctgttgtcagt
ggtcggagaagtagaccccgtgaaagagagcgggagcgagagcgagaccgtcctagagat
aacagaagagacagagagcgagacagaggtcgtgatcgagaaagagaaagaatatgtgat
cgggacagagaccgaggggagagaggtcgttatcgaagataa
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