Phodopus roborovskii (desert hamster): 127232384
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Entry
127232384 CDS
T08852
Symbol
Limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
prob04990
]
127232384 (Limch1)
Domain-containing proteins not elsewhere classified [BR:
prob04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
127232384 (Limch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
127232384
NCBI-ProteinID:
XP_051054407
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MACPALGLEALQPLQPEPPPEPAFAEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNTILFLRGCKELGLKESQLFDPSDLQDTSSRVTVKNLDYS
RKLKNVLVTIYWLGKAANSCASYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRRKKAEREEYRKSWST
ATSPLGGERPFRYGSRTPVSDDAESTSMFDMRCEEEAAVLPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLMSGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSSFP
SDPSPMRYLRQQSLPPPKFTATVETTIARTSAPETSAAGGSGPPSKPITPNAVPMLTPKP
YSQPKNSQEALKTFKVDGKISMNGEMVHEDEEEKEKKGPTVAQMFEGVATVHGSPVQVKQ
GNNSIEINIQKPNSAPQELTAASDETEPNGQEDGNSNGKLGTQDVELASAEPQHFTTTVT
RCSPTVALVEFSSSPQLKNEVPEERDQKKPENEMSGKVELVLSQKVVKPKSPEPEATLTF
PFLDKMPETNQLHLPNLSSQEVPSSASVPLRVQNSWRRYQFFSQSVDSPSSEKTPVTTPF
KFWAWDPEEERRRQEKWQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEGRRYYEEERK
IIEDTVVPFTLSSSSADQLSSSSSITEGGGTMFFYQKKIDLENCQDKEKERRPFQENGSD
SLLKARESGPPEEDSISSLTQGLSAHSEDSISKGIHPDQQPEAEARAPHCGLSPQLAQEP
PQNQQVSNPSTYTSEEEKPKTLPLDKSVNHQIESPGERRKKSPRENFRAGPLSPCSPTPP
GQSPNRYKRSISGKKLCSSCGLALGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGT
DVRIRNGLLNCTDCYMRSRSAGQPTTL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcttgccccgctctcggtctggaagcccttcagcccctgcagcccgaaccacctccg
gagcctgcctttgctgaggcacaaaagtggatcgagcaagtcactggccgaagttttggt
gataaagacttccggacaggcctagaaaatgggatccttctttgtgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aacaccatcttattcttgagaggctgtaaagagcttggccttaaagaatcacaacttttt
gaccctagtgacctccaggatacatccagcagggtcactgtcaagaaccttgattatagc
cgaaagctgaaaaacgtgttagtgaccatttattggctggggaaagccgcaaacagctgt
gcatcctatagtggaaccacactgaacctgaaggagtttgaagggctgttggctcagatg
cgaaaggagactgatgacattgagagccctaagcgcagtatccgagacagcggctacatt
gactgctgggattctgagcgcagcgattccctctctcctcctcgccacggccgagatgac
tcctttgacagcctggattcttttggctcccgctcccggcagacaccttcaccagatgta
gttctcaggggaagtagtgatggaagaggaagcgactctgaatccgacttgccgcaccgg
aagttgccggatgtgaagaaagatgatatgtctgcacgacggacttcccatggcgagccg
aagtctgcagtgccttttaaccagtacctcccaaacaaaagcaaccagacggcctatgtc
cccgcacctctgagaaggaagaaggccgagcgggaggaatacaggaaaagctggagcacg
gctacctccccccttggcggggaaaggcccttcagatacggttcgagaactcctgtgtca
gatgacgcagagagcacgagtatgtttgacatgcggtgtgaggaggaggcagcggtgctg
ccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagggaagag
gacgacaaatggcaagatgacctggctcgttggaagagccgtagaagaagtgcttctcag
gacttaatcaagaaagaggaagaaaggaagaaaatggagaagctgatgtctggagaagac
gggacaagtgaacgaaggaaaagcatcaaaacttatagagagattgttcaagaaaaagag
cggagagagagggagctgcacgaggcctataagaacgcacggtcgcaggaggaggcagag
gggatcctccaacagtacattgagaggttcaccatcagtgaggctgtgctcgaacgcttg
gagatgccaaaaattctggaaagaagccattcaacagagccaaacttatcatccttccct
agtgaccccagccccatgaggtacttgaggcagcaatcactgcctccacccaaattcact
gccacagttgaaaccaccattgctcgcaccagtgccccagagaccagcgcagcaggcggc
agtggacctccaagcaaacctatcactcccaatgcagtgcctatgctgacacccaagcct
tactcccagcccaaaaactctcaagaggctctgaagacttttaaggtggatgggaaaatc
agcatgaatggagaaatggtccatgaagatgaggaagaaaaggaaaaaaaagggcccacg
gtggcccagatgtttgaaggtgtggccaccgtgcatggctctcctgtgcaagtgaagcaa
ggcaacaacagcattgagatcaacatccagaagccaaactctgctccccaggaactgaca
gcagcctctgatgaaactgagccgaatggccaagaggatggcaacagtaatgggaagttg
gggacacaggatgtggagctggcctcagcagagccacagcattttacaaccactgtgact
cgatgcagcccgactgtggccttggtggagttttcctccagcccgcagctgaagaacgag
gtgccagaagaacgagaccagaagaagcctgaaaatgagatgagtgggaaggtagagtta
gtgctgtcacagaaggtggtaaagccaaaatccccagaaccagaagcaacgctgacgttt
ccatttcttgacaaaatgcctgaaacaaaccaactgcatttgccaaacctcagttctcaa
gaggtgcctagcagtgccagtgttccgctgagagttcagaactcttggcgacggtaccag
tttttctcccagtcagtggattctccaagcagcgaaaaaactcctgtcactacgcctttc
aagttctgggcatgggacccggaagaggaacgtaggcgacaggagaaatggcagcaggag
caagagcgtctgctccaggagaggtaccagaaggaacaggataagttgaaggaagagtgg
gaaaaggcccaaaaggaggtggaagaagaaggacgcaggtactacgaggaggagcgtaag
ataattgaagacactgtggtcccattcaccctttcctcgagttctgcagaccagctgtcc
tcttcctcatctataactgaaggtggtgggaccatgtttttctaccagaagaagatagac
ttggaaaactgtcaagacaaagaaaaagaaagaagacctttccaggagaatggcagtgac
tcattgctcaaggccagggaaagtggtccaccagaggaggacagcattagcagcctaact
caaggactctcagctcactctgaagactccatatcaaaaggaatccatcctgaccagcag
ccagaggcagaggccagggccccacactgtggtctaagcccacagctagctcaggagcca
cctcagaaccaacaagtgtcaaacccatcaacatacacatcggaagaggagaagcccaaa
accctgcccctggataaaagtgtcaatcatcagatcgagtctccgggtgaaaggaggaag
aaaagccctcgagagaacttccgggctgggcccttgtccccctgttctcctacccctcct
ggccaatcaccaaacaggtataagaggtctattagcgggaagaagctgtgctcctcctgt
gggctcgctttgggtaaaggagctgcaatgatcatcgagaccctgaatctctactttcac
atccagtgtttcaggtgtggcatttgtaaaggacagctcggagatgctgtgagtgggacg
gatgttaggattcgcaacggtttgctaaactgtactgactgctacatgcgatccaggagt
gctggccaacctacaacactgtga
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