Phodopus roborovskii (desert hamster): 127232544
Help
Entry
127232544 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein RFP-like
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127232544
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127232544
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127232544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-Tbcl_FmdE
zf-RING_4
Baculo_IE-1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
127232544
NCBI-ProteinID:
XP_051054609
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MASGSVAESLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEQDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNRLDHLRRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSGLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagagcctgcagcaggagaccacctgccccgtgtgtctc
cagtacttcgtggagcccatgatgctcgactgtggccacaacatctgttgcgcttgcctg
gcccgctgctggggtgccgcggagacgaacgtgtcgtgcccgcagtgccgggagaccttc
ccgcagcgccacatgcggcccaaccggcacctggccaacgtgacccagctggtgaagcag
ctgcgtacggagcggccgtcggggcccggcggcgagatgggcgtgtgcgagaagcaccgc
gagcctctgaagctgtactgcgagcaggaccagatgcccatctgcgtggtgtgcgaccgc
tcgcgggagcatcgtggccacagcgtgctgccgctggaggaggcggtggagggctttaag
gagcaaatccagaatcggctggaccatctgagaagagtaaaagacttgaagaagagacgt
cgggcacagggggagcaagcaagagctgagctcttgagtctgacccagatggagagggaa
aaaattgtttgggagtttgagcagctgtatcactccttgaaggaacatgagtatcgcctg
ttagctcgccttgaggagctagacttggccatctacaacagtatcaacggtgccatcact
cagttctcctgcaacatctctcacctcagtggcctgattgctcagctggaagagaagcag
cagcagcccaccagggaactcttacaggatattggagacacactaagcagggctgaaaga
atcaggatccctgagccctggatcacacctccagatctacaagagaaaatccacattttt
gcccaaaaatgtctgttcttgacagaaagtctgaagcaatttacagaaaaaatgcagtca
gatatggagaaaatccaagaattgagagaggctcagttatactcagttgatgtgaccttg
gacccagacacagcctaccccagccttatcctttccgataaccttcgccaagtacggtac
agttatctccagcaggacctaccagacaaccctgaacggttcaatctgtttccctgtgtc
ttgggctctccgtgcttcatcgctgggagacattactgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgtgaagactcggtgtgcagaaaaggtggagtgacctca
gcaccccagaatggattctgggcagtgtcgttgtggtatgggaaagaatattgggctctt
acctccccgatgactgccctcccccttcggacccctcttcagcgggtagggattttcttg
gactatgatgctggtgaggtctccttctacaatgtgacagagagatgtcatacctttact
ttctctcatgctaccttctgtgggccagtccggccctacttcagcctaagttactcggga
gggaagagtgcagctcctttgatcatctgccctatgagtgggattgatgggttttctggc
catgttgggaatcacggtcattccatggaaacctccccttaa
DBGET
integrated database retrieval system
