Phodopus roborovskii (desert hamster): 127232560
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Entry
127232560 CDS
T08852
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127232560 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127232560 (Dhx36)
03012 Translation factors [BR:
prob03012
]
127232560 (Dhx36)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127232560 (Dhx36)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127232560 (Dhx36)
Translation factors [BR:
prob03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127232560 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
ResIII
Motif
Other DBs
NCBI-GeneID:
127232560
NCBI-ProteinID:
XP_051054616
UniProt:
A0AAU9ZWU3
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSYEYHQSWSRDAGPRGSGQGSGGGGGGSRGPGGGGGGGGRGGRGRHPGHLKGREIGLWY
AKKQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEISWFAPEDHGYGTEV
SSEKKVNSEKKFDNQEKKSLNQEKKTFRITDKSYIDRDSEYLLQENEPNVGLDQQLLEDL
QKKKTDPRYIEMQHFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY
IERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTIIKDLLNFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLERMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVL
LSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDNGQEVIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIECPHPVD
WNNTKSRDCAVLSAILDLIKTQEKAVQRNLPPRSQEGYYS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgaataccatcagagctggagccgcgacgcggggccgcggggctccggccag
ggctctggcggcggcggcggagggagccggggccccggcggcggaggaggcggagggggc
cgcggtggtcggggacggcatcccggacacctgaagggtcgcgagatcggcctgtggtac
gccaagaagcagacgcagaagaacaaggaggctgagaggcaggagagagctgtagtacac
atggatgaacgacgagaagagcaaattgtgcagttgctgaattccgtacaagctaagaat
gataaagattcagagatatcctggtttgctcctgaggatcatgggtatggtacagaggtg
tcttcggagaaaaaggttaactcagaaaagaaatttgacaaccaggaaaagaaatcactg
aaccaagaaaaaaagacttttaggatcacagacaaatcatacattgaccgagattctgag
tacttattgcaagaaaatgagccaaatgtaggcttagaccagcaattattggaagattta
caaaagaaaaaaactgatcctcggtatatagagatgcagcatttcagaaaaaaattgcct
tcatatggaatgcaaaaggagctggtaaatttaatcaataaccaccaggtaacagtaata
agtggtgaaaccggctgtggcaaaaccactcaggttacacagttcatcttggataactac
attgaaagaggaaaagggtctgcctgcagaatagtgtgtactcagccaagaaggattagt
gccatttcagttgctgagagagtagctgcagaaagggcagagtcttgcggcaatggtaat
agtactggataccagattcgtctccagagtcggttgccaaggaaacagggctctatctta
tactgcacaacaggaatcattctccagtggctccagtcagactcgcgtttgtccagtgtt
agccatattgtacttgatgaaattcatgaaaggaatttacagtcagatgttttaatgact
attattaaagatcttctcaattttcgatctgacctgaaagtaatattgatgagtgcaacg
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacctggt
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatatgtt
ccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcagggccatgtaaat
agacaagagaaagaagaaaaagaggcaatctataaagaacgctggccagcttatataaag
gaactgcgaacaagatactctgcaagtaccgtagatgttttggaaaggatggatgatgat
aaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggat
ggtgcaatactggtctttctaccaggctgggacaatatcagtaccttacatgatctcttg
atgtcacaagtgatgtttaaatcagataagtttattattatacctttacattcactgatg
cctacagtaaaccagacacaggtatttaaaaaaactcctcctggcgttcggaaaatagta
attgctaccaacattgcagagactagcatcaccatagatgatgtggtttacgtaatagat
ggaggaaaaattaaagagacgcactttgacacacaaaacaacatcagtaccatgtctgct
gagtgggttagtaaagctaatgccaaacagcggaaaggaagagcgggaagagttcagcct
ggtcattgttatcatctgtataatggcctgagagcaagtcttctagatgactaccaactg
ccagaaattttgagaactcccttggaagaactttgtttgcaaataaagattttaaggcta
ggtggaattgcttattttctgagtaggttaatggatccaccatccaatgaggcagtattg
ctctccataaaacacctgatggaactgagtgctttggataaacaggaagaattgacacct
cttggcgtccatttagccagattacctgttgagccacatattggaaaaatgattcttttt
ggagctttattctgttgcttagatccagtactcactattgctgccagcctcagctttaaa
gatccctttgtcattccactgggaaaagaaaagattgcagatgcaagaagaaaggagttg
gcaaaggaaactagaagtgatcacctgacagttgtgaatgcatttgagggttgggaagaa
gctaagcgacgtggtttcagatatgaaaaagactactgctgggaatattttctgtcttca
aacacactacagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
ggatttgtaagcagtagaagtcctaaagatccaaaagctaatataaattcagataatgag
aagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatccgacta
aatttgggtaaaaaaagaaaaatggtgaaagttcacacaaagtctgatggtctagtttct
attcatcctaagtccgtcaatgtggagcagacagacttccattataactggcttatctat
catctgaagatgaggacaagcagtatttacttgtacgactgtacggaagtttcaccatac
tgcctattgttttttgggggagatatttccatccagaaagataatggccaggaagttatt
gctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgttaagggg
ctgagaaaggaactggatagccttctgcaggagaagattgaatgccctcaccctgtagac
tggaacaatactaagtccagagactgtgcagtactgtcagctattctagacttgatcaaa
acacaggaaaaggctgttcagaggaacttgccaccacggtcacaggagggctattacagc
tga
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