KEGG   Phodopus roborovskii (desert hamster): 127232631
Entry
127232631         CDS       T08852                                 
Symbol
Snx27
Name
(RefSeq) sorting nexin-27 isoform X1
  KO
K17936  sorting nexin-27
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:prob04131]
    127232631 (Snx27)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:prob04990]
    127232631 (Snx27)
Membrane trafficking [BR:prob04131]
 Protein recycling
  Others
   Others
    127232631 (Snx27)
Domain-containing proteins not elsewhere classified [BR:prob04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   127232631 (Snx27)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 RA_2 SNX17-27-31_F1_FERM USP7_C2 PDZ_2 SNX17_FERM_C UBX RBD SNX17-31_F2_FERM Pept_S41_N_bact OTU1_UBXL
Other DBs
NCBI-GeneID: 127232631
NCBI-ProteinID: XP_051054745
LinkDB
Position
Unknown
AA seq 539 aa
MADEDGEGIHPSAPHRNGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQVS
EGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIR
AGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKFVV
YNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEY
LEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTAVTVRVKKNSTTDQVYQ
AIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTVRKWLF
TTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRTCE
GYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMTRSQQRDVAT
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcggacgaggacggggaagggattcacccctcagcccctcaccggaatggaggcggc
ggcgggggttctgggctccactgcgccgggaacggcggcgggggaggcggcggcccgcgg
gtcgtgcgcatcgtcaagtccgagtccggctacggcttcaacgtgcggggccaagtgagc
gagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcatgtgagc
gccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgcatcctg
gaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggacctgatccga
gcaggcgagaaggaattgatcttgacagtgttgtctgtacctcctcatgaggctgataac
ctagatcccagtgacgactccttgggacaatcattttatgattacacagaaaagcaagca
gtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaagtttgtggta
tacaacgtttacatggcagggcggcagctgtgttctaagcggtaccgggaatttgccatc
ttgcaccaaaacctgaaaagagagtttgccaactttacatttcctcgacttccaggaaag
tggccattctcattatcagaacaacagctagatgcccggcgtcggggactggaagaatat
ctagaaaaggtgtgttccatccgagtcattggtgagagcgacatcatgcaggagttcctg
tcagaatctgatgagaattacaatggtgtgtctgatgtagaactgagagtagcattaccg
gatggaacagcagttaccgtcagagttaaaaagaacagtactacagaccaagtataccag
gctattgcagcaaaggttggcatggacagtacaacagtgaattactttgccttatttgaa
gttatcaatcattcctttgtacgtaagctggcacctaatgaatttcctcataaactctac
gtccagaattatacatcagctgtgccaggcacctgcctgaccgttcgcaagtggctcttt
acaacggaagaagaaatcctcttaaatgacaatgaccttgctgttacttacttctttcat
caggctgttgatgatgtaaagaaaggttacattaaagcagaggagaagtcttaccagtta
cagaagctatatgaacaaaggaaaatggtcatgtacctcaacatgctaaggacttgtgag
ggctacaatgaaatcatcttcccacactgtgcctgtgactcccggaggaaggggcatgtt
atcacagccatcagcatcacgcactttaaacttcatgcctgcactgaggaagggcaactg
gagaaccaggtaatagcatttgaatgggatgagatgcagcgatgggacacagatgaagaa
ggaatggccttctgttttgaatatgcgcgaggagagaagaaacctcgatgggttaaaatc
ttcacaccatatttcaattacatgcatgagtgctttgagagggtgttctgcgagctcaag
tggagaaaagagaatattttccagatgacgaggtcacagcagagggatgtggccacctag

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