Phodopus roborovskii (desert hamster): 127233119
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Entry
127233119 CDS
T08852
Symbol
Sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127233119 (Sema6c)
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GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127233119
NCBI-ProteinID:
XP_051055502
UniProt:
A0AAU9ZZH2
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Position
Unknown
AA seq
958 aa
AA seq
DB search
MPRAPHSTPLLLLLLLSLPRAQAAFPRDPIPLVNSDLRGTSPLSWFRGLEDDAVAAELGL
DFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKFLTWRSQDVENCAVRGKLTDEC
YNYIRVLVPWDAQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAIF
AEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGDHVYFFFR
EVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ
ALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVS
EDRVPSPRPGSCAGVGGAALFSSSQDLPDDVLLFIKAHPLLDPAVPPATRQPLLTLTSRA
LLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGPEPIILEEIDAYSPTRCSG
KRSAQAARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASQDPYCGWHR
SRGCVNIWEPGGTDVDVMGNQDSMEHGGCQDGATGSQSGPGDSAYVLLGPGPSLETPSSP
SDAHPGPQSSTLGAHTQGVRRDLTPASASRSIPIPLLLASVAAAFALGASVSGFLVSCAC
RRAHRHRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAAQTPQLYTTFLPPPEG
GPPPELACLPTPESTPELPAKHLRASGGPWEWNQNGNNASEGPGRPRGCSAPGGPAPRVL
VRPPPPGCPGQAVEVTTLEELLRYLHGPQPHRKGTEPLASAPFTSRPPAPEPGAALFADS
SPLPRDCVPPLRLDVPPEGKRAAPGGRPALSAPAPRLGVGRRLPFPTHRAPPALLTRVPS
GGPARYSGGPGRHLLYLGRPDGYRGRPLKRVDVKSPLSPKPPLAASTQPAPHGGHFNF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccccactccacgcccttgctgctgctgctgttgctgtcactcccccgc
gcccaggctgcctttccccgggaccctatccctctggtgaactctgacctgcgaggtact
tctccgttatcctggttccggggcctggaggatgatgctgtggctgcagaacttgggctg
gactttcagcgattcctgactttgaaccggaccttgcttgtggccgcccgggatcacgtt
ttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaacaagtttctg
acatggaggagccaagatgtggagaactgtgctgtccggggaaagctgacggacgaatgc
tacaactacatccgtgttcttgttccctgggacgcgcagacactccttgcctgtggaaca
aactcattcagtcccgtgtgccgcagctatgggataacatcgctgcaacaggagggtgaa
gagctgagtgggcaagctcggtgtcccttcgatgccacccagtcaaatgtggccatcttt
gcagagggcagtttgtactcagccacagcagccgatttccaggccagtgatgctgtagtt
tacagaagccttggacctcagcccccactccgttctgccaagtatgactccaagtggttg
cgagagccacactttgtctatgctttggagcatggagaccacgtctacttcttcttccga
gaggtgtctgtagaggatgcccggctggggagggtgcagttttcccgggtagcccgggtg
tgtaaacgtgacatgggtggctcacctcgggccttggatcgccactggacatccttcctt
aagctgaggctcaactgctctgtccctggggactctaccttctactttgacgtcttacag
gccttaactgggcctgtgaacctgcatggccgctctgctctctttggggtcttcactact
cagactaatagcatacctgggtctgcagtgtgcgccttctacctggatgatattgagcgt
gggtttgagggcaagttcaaggagcagaggagtctggatggggcctggactcctgtgtct
gaggaccgagtcccctcccccaggccagggtcctgtgcaggtgtgggtggagctgccttg
ttctcctcctctcaagacctacctgatgatgtcctgctcttcatcaaggcacacccactg
ctggatcctgctgtgccgcctgccacccgtcaacctctcctcactctcaccagcagggct
ctgctgacccaggtagctgtggatggcatggctgggccccacagaaatactacagtcctg
tttcttggctccaatgatgggacagtgctgaaggtgctacctccagggggacagtctctg
ggacctgagcctatcatattggaagagattgatgcctacagccctacccggtgcagtggg
aagcgctcggcccaagctgcccggcggatcatagggctggagctggacactgagggtcac
aggctctttgtggcctttcctggatgtatcgtctacctctctctcagccgctgtgcccgg
catggggcttgtcagaggagctgtctggcttcccaggacccatactgtggatggcatcga
tccagaggctgtgtgaatatctgggaacctggtgggactgacgtggatgtgatggggaac
caggactccatggagcatggcggctgccaagatggagctactgggagtcagtctggtcct
ggagattctgcttacgtgcttctgggtcctggcccttcccttgagacccccagttccccc
agtgatgcccacccagggccccagtcttccactcttggagctcacacgcagggcgtgcgc
agggacctcaccccagcttcagcctcccgctccatccccatccctctcctcctggccagt
gtggcggcggccttcgccctgggcgcctcagtctccggcttcttggtgtcctgtgcttgt
cgtcgcgcgcaccgacatcggagcaaggacatcgagaccccagggctgccgcgccctctg
tcccttcgcagtctggcccggctgcacggtggcggtcctgagcccccgcctccgcccaag
gatggagacgcagcgcaaacgcctcagctctacactaccttcctgcccccgcccgagggc
ggacccccaccggagctggcctgcctgcctacccccgagtccacgcccgagctgccggcg
aagcacctccgtgcctccgggggtccttgggagtggaaccagaacgggaacaacgcctcg
gagggcccgggccgcccacggggctgcagcgcgccgggcgggcccgcgccgcgcgtgctg
gtgaggccgccaccgccgggctgcccggggcaggcggtggaggtgaccacgctggaggaa
ttgctgcgctacctgcacggcccgcagccgcacaggaagggcaccgaacccctcgcctcg
gccccgttcacctcgcggccgccggccccggagcccggcgcggccctgttcgcggactcc
agcccgctgccgcgggactgcgtgccgccactgaggctcgatgtgccgcccgagggcaag
cgcgccgctccgggcgggcggcccgccctctcggccccggctccgcgcctgggcgtcggc
cgcaggttgcccttccccacgcaccgtgcgcccccggccctgctcacgcgagtcccctcg
ggaggcccggccaggtactccggggggcccgggaggcacctcctgtacctgggccggccc
gacggctaccgcggccgccccctgaagagggtggacgtcaagtccccgctgtcccccaag
ccgcccctcgccgcctcgacgcagcccgcgccgcacggcggccattttaacttctga
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