Phodopus roborovskii (desert hamster): 127233207
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Entry
127233207 CDS
T08852
Symbol
Vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob05017
Spinocerebellar ataxia
prob05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127233207 (Vldlr)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127233207 (Vldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127233207 (Vldlr)
Membrane trafficking [BR:
prob04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127233207 (Vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
EGF_LRP2
hEGF
Motif
Other DBs
NCBI-GeneID:
127233207
NCBI-ProteinID:
XP_051055524
UniProt:
A0AAU9ZZZ9
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRDSGASTSGKRARCDNSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEVSC
GARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCD
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHLKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCDQEQDCRDWSDEPLKECNVNEC
LINNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQ
WPNGITLDLVKSRLYWLDSKLHMLSSVDLDGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMQNGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGRECQSTSTPVTYSETKDINTTDILRTSGLVPGGI
NVTTAVSEVSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctgtggctgctgctcgcgctgtgctgggcgccccgg
gacagcggcgcctctacaagcgggaaaagagccagatgtgataactcccagttccagtgc
acaaatggccgttgtattactctgctgtggaaatgtgacggcgatgaagactgtgcagat
ggcagcgatgaaaagaactgtgtaaagaagacatgtgctgagtctgacttcgtgtgcaaa
aacggccagtgtgttcctaatagatggcaatgtgatggggaccctgactgtgaagacggt
tctgatgaaagcccagaacagtgccatatgagaacatgccgcataaatgaagtcagctgt
ggcgcccgttctactcagtgtatcccagtgtcctggagatgcgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacataacatgtagtgctgacgagttcact
tgctccagtggtcgctgcgtctccaggaactttgtgtgcaatggccaggatgactgtgat
gatggcagtgacgagctggattgtgcgccacccacctgcggtgcccacgagttccagtgc
agcacctcctcgtgtatccccctcagctgggtgtgtgatgatgacgcggactgctcggac
cagtcagatgagtctcttgaacagtgtggccgtcagccagtgatacatctgaaatgtcct
gccagcgagatccagtgtggctctggcgagtgcattcacaaaaaatggcggtgtgacggc
gaccctgactgtaaggatggcagtgatgaggtcaactgcccttctcgaacctgcagacct
gaccaatttgaatgtgaagatgggagctgcatacatggcagcaggcaatgcaatggcatc
cgagactgtgtggacggctctgatgaagtcaactgcaaaaatgtcaaccagtgcttgggc
cctggaaaattcaagtgcagaagtggggaatgcatagacatcagcaaagtgtgtgaccag
gagcaggactgcagggactggagtgatgagcctctgaaggaatgcaatgtcaacgaatgc
ttgattaataacggtggctgctcccatatctgcaaggacctagttataggctatgaatgt
gactgcgcagccgggtttgagctgatagacaggaaaacctgtggagatattgatgaatgc
caaaatccggggatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatctttactaatcgaagagacatcaggaagattggcctagagaggaaggaa
tacatccagcttgtagaacaactaagaaacacagtggctctcgatgctgacattgcagcc
cagaagctattttgggccgatctgagccaaaaggctatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagacggagccaagaggaagttcctgtttaactctgacttgcgagagcctgcctcc
atagctgtggacccattgtctgggtttgtttactggtctgactggggtgagccagctaaa
atagaaaaagcagggatgaatggatttgacaggcgtccactggtgaccgaagacatccaa
tggcctaatggaattacattagaccttgtcaaaagccgcctctactggctagattccaag
ttgcacatgctgtccagtgtggacttggatggccaagatcggaggatagtgctcaaatct
ctggagttcctagctcaccctcttgcactcacaatatttgaggatcgtgtctactggata
gatggagaaaatgaagcagtgtatggtgccaataaattcactgggtcagaactggctact
ctagtcaacaacctcaatgatgctcaagatatcattgtctaccatgaactcgttcagcca
tcaggtaaaaactggtgtgaagaggatatgcagaatgggggatgtgaatacctctgccta
ccagcaccacagattaatgatcactctccgaaatatacctgttcctgtcccaatgggtac
aatcttgaggaaaatggacgagagtgtcaaagtacttcaactcctgtgacttacagtgag
acaaaagatatcaacacaacagacattctacgtactagtggactggttcctggagggatc
aatgtgaccacagcagtatccgaggtcagtgttcccccaaaaggaacttcagctgcttgg
gccatccttcctctcttgctcttggtaatggcagcagtaggtgggtacttgatgtggcgg
aattggcaacataaaaacatgaaaagcatgaactttgacaatcctgtgtacttgaagacc
actgaagaggacctctcaatagacatcggtagacacagtgcttctgtcggacacacgtac
ccagcaatatcagttgtcagcacagatgatgatctggcttga
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