Phodopus roborovskii (desert hamster): 127233240
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Entry
127233240 CDS
T08852
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04110
Cell cycle
prob04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127233240 (Smc3)
04114 Oocyte meiosis
127233240 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127233240 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
prob00535
]
127233240 (Smc3)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127233240 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
127233240 (Smc3)
Proteoglycans [BR:
prob00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
127233240 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
Baculo_PEP_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
127233240
NCBI-ProteinID:
XP_051055588
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIENINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQAL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGGGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagatcaaacaattgta
gatcccttcagttcaaagcataatgttattgtgggcagaaatgggtctggaaaaagcaac
tttttttatgcaattcagtttgttctcagtgatgaatttagtcatctccgcccggagcag
cgattggctttgttgcatgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgataattcagacaaccggttaccaattgataaagaggaagtttcacttcgaaga
gttattggtgcaaaaaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaatcttcttgaaagtgctggattttcccgaagtaatccctattacattgttaaa
caaggaaagatcaaccaaatggcaacagcgccagattctcagcgattaaagctgttgaga
gaagtagctggcactagagtgtatgatgaacgtaaagaggagagcatctctctaatgaag
gaaacggagggcaaacgggaaaaaatcaatgagttgttaaaatacattgaagagcggcta
cacactctcgaggaggaaaaagaagagctggctcagtatcagaagtgggataaaatgagg
cgagccctagagtacaccatctacaaccaggagctcaacgagactcgggccaaactggac
gagctttctgctaagcgagaaacaagtggagagaaatctagacaattgagagatgcccaa
caggatgcgagagataaaatggaggatattgagcgccaggttagagaactgaaaacaaaa
atttctgctatgaaagaagaaaaagagcagcttagtgcggaaagacaagaacagattaag
caaaggaccaagttggaacttaaagccaaggatctacaagatgagcttgcaggcaatagc
gaacagcggaaacgtttactaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagagacagaacctaaattcaacagcgtaaaagaaaaagaagagcga
ggaattgctagattggctcaagctacccaagaaagaactgacctttatgcaaaacagggt
cgaggaagccagtttacatcgaaagaggaaagagacaagtggattaaaaaggagctgaag
tctttagatcaggctattaatgacaaaaagagacagattgctgctatacataaggatttg
gaggatactgaggcaaataaagaaaaaaatctggagcagtataataaactggatcaggat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgagctacaaagtgaaaggaactacctgtggagagaggagaatgcagagcag
caagcacttgctgctaagagagaggatctggaaaagaagcagcaacttcttagagcagca
acaggaaaggccattttaaatggaatagacagcataaacaaagtgctagaacattttcgt
cgaaaaggaataaaccaacatgttcaaaatggctaccatggcattgtaatgaataatttt
gagtgtgagccagctttctatacttgtgtggaggtcactgctggtaacaggttattctat
cacattgttgattcagatgaagtcagcacgaagatcttaatggagttcaataaaatgaat
cttcctggagaggtgactttcttgcctcttaacaagttagacgtgagggacactgcctat
cctgaaacaaacgatgctattcctatgatcagtaaactgaggtacaaccccaggtttgac
aaagctttcaaacatgtgtttgggaaaacactcatctgtaggagcatggaagtttccact
cagctggctcgtgctttcactatggattgtattactttggaaggtgatcaagtcagccat
cgaggtgctctgactggaggttattacgatacaagaaagtctcgacttgagttacagaaa
gatgtcagaaaagcagaagaggagctgggtgaacttgaagcaaagctcaatgaaaacctg
cgcagaaacattgaaaatattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagactcagcaaagaaaatttaaagcatccagagacagcatattatcagagatgaag
atgctaaaagagaagaggcagcagtcagagaagacctttatgcccaagcaacgtagctta
caaagcttggaagcaagtctgcatgctatggagtctaccagagaatcactgaaagcagaa
ctaggaactgatttgctttctcaactcagtctagaagatcagaaaagagtagatgcactg
aatgatgaaatccgtcaacttcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggtattattactcgagtagagacttacctgaatgagaatctgaggaaacgcttg
gaccaagtagaacaggaacttaatgaactgagagagacagaaggtggtactgttcttact
gctacaacatcagaacttgaagctatcaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgacactaaa
gagctggagaagatgaccaaccgccaaggcatgctgctgaagaagaaggaagagtgcatg
aagaagatccgggagctgggctccctccctcaggaagcctttgaaaagtaccaggccctg
agcctcaagcagttgtttcgaaaacttgaacagtgcaacacagagttgaagaagtacagt
catgttaacaaaaaagcgttagatcagtttgtgaatttctctgagcagaaagaaaagttg
ataaaacgacaagaagaattggataggggctacaaatcaatcatggaattaatgaatgta
cttgaacttcgaaaatacgaagctattcagttaactttcaaacaggtatctaagaacttc
agtgaagtattccagaagttagtacctggtgggaaagcgactttggtgatgaagaaaggc
gacgtggagggcagccagtctcaggacgaaggagaagggggtggtgaaagtgagagaggc
tctgggtcacagagcagtgtcccgtcagtcgaccagttcacaggcgttggaatcagggta
tcatttacaggaaagcaaggtgaaatgcgggaaatgcaacaactttcgggcggacagaag
tctctggtggcccttgctctgatttttgccatccagaagtgtgaccctgctcccttttac
ttgtttgatgagattgaccaagcattggatgctcagcacagaaaagctgtgtcggatatg
atcatggaactagctgtgcatgcccagtttattactactacgtttaggcctgaactactt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggttagtcatattgatgtg
attacagcagagatggccaaagattttgtagaagatgataccacacatggttaa
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integrated database retrieval system
