Phodopus roborovskii (desert hamster): 127233244
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Entry
127233244 CDS
T08852
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127233244 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127233244 (Taf5)
03036 Chromosome and associated proteins [BR:
prob03036
]
127233244 (Taf5)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127233244 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
127233244 (Taf5)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127233244 (Taf5)
STAGA complex
127233244 (Taf5)
TFTC complex
127233244 (Taf5)
SAGA complex
127233244 (Taf5)
SLIK complex
127233244 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_Nup120_160
Beta-prop_DCAF12
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
127233244
NCBI-ProteinID:
XP_051055593
UniProt:
A0AAU9ZXU4
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTPNNGPNGGGGAVAAAAAAGGD
GGTPKPVVAASAAAPAGAAPVPAAATEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGELDGAGAEAASALLSRVTASVPGSAAADPPGSGASAATVFSGSASG
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPDNSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctggagcccgagggaccg
ccgacgctgctccctccgcaggctggcgacggcgcgggcgagggtagcggtggcactccc
aacaacggccccaacggcggcggcggcgccgtggcggcggcggcggcggccggcggggat
ggcgggacccccaagcctgtggtggctgcctctgccgctgccccggcgggggcggccccg
gtgcccgccgctgccaccgaggccggcgcgccccacgaccgacagactctcctggcggtg
ctgcagttcctacggcagagcaacctccgcgaggccgaagaggcactgcgccgcgaggcc
cggctgctggaggaggcagtggcgggctccggagctccgggagagttggacggggccggc
gcggaggcggcaagcgcgcttctcagccgggtcaccgcttcggtgcccggctctgcggcc
gctgaccctccgggctccggcgcttcggcggccacggtcttctcaggttcagcctcaggt
cctgcggctccaggaaaagttggaagtgtagctgtggaagaccagccagatgtcagtgct
gtcttgtcggcctacaaccaacaaggagaccctacaatgtatgaagagtactacagtgga
ctgaaacacttcattgaatgctctctggactgccatcgagcagaactatcccaactcttt
taccctctgtttgtacacatgtacttggagctagtttataatcaacatgaaaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggagcacatgaaagggaatgaaaccatgctggacttt
cgaacaagtaaatttgttcttcgaatttcccgtgactcgtaccagctcttgaagcggcac
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgcctcgtagtaagcaacagatagatgccatggtgggaagtctggca
ggagaggctaaacgagaagcaaacaaatcaaaggtattttttggtttattaaaagaacca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaacgaagaaggaaaacct
aaaaagaaaaagcctaaaaaggacagtattggatctaaaagcaaaaaacaagatcccaat
gccccacctcaaaacagaattcctcttcctgagttgaaagattcagacaaactggataaa
ataatgaatatgaaagagaccaccaaacgagtgcgccttgggccagactgcttaccttcc
atttgtttttatacattccttaatgcttaccagggcctcacggcagtggatgtcactgat
gattccagtctgattgctggaggttttgcagattcaactgtcagagtgtggtccgtgaca
cctaaaaagcttcgtagtgttaaacaagcatcagatcttagtcttatagacaaagaatca
gatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccggataggaactatctgctctcc
tcttcagaggacggaactgttagactctggagccttcagacgtttacttgcttggtgggt
tataaaggacacaactacccagtatgggacacacagttttctccatacggatattatttt
gtgtcaggaggccatgaccgagtagctcggctttgggctacagatcactatcagccttta
aggatatttgctggacatcttgctgatgtgaattgcactagatttcatccaaattccaac
tatgttgctacgggctctgcagacagaactgtgcgcctctgggatgtcctcaatggtaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtacttctttgggatattggacat
ggcttgatggttggagaattaaaaggccacactgatacagtgtgttcacttagatttagt
agagatggtgaaattttggcatcaggttccatggataatacagtgcggttatgggatgcc
atcaaggcatttgaagacttagagactgatgactttactacagccactgggcatataaat
ctacctgacaactcccaggagttattacttggtacatacatgaccaaatcaacaccagtt
gtacatctacactttacaagaagaaacttggttctagctgcaggagcttacagtccgcaa
taa
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integrated database retrieval system
