Phodopus roborovskii (desert hamster): 127233251
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Entry
127233251 CDS
T08852
Symbol
Vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127233251 (Vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127233251 (Vti1a)
Membrane trafficking [BR:
prob04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
127233251 (Vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
DUF6987
Sec20
Fusion_gly
Mer2
FapA
Peptidase_S46
HAAS
BPS1
Motif
Other DBs
NCBI-GeneID:
127233251
NCBI-ProteinID:
XP_051055604
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLEAEFKRSRIAYSDEVRNELLGDDGNSSENQLIKFRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILLVILGIIVVITILTAITLFVKGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgacttcgaaggctacgagcaggacttcgcagtgctcaccgcggagatcacc
agcaagatttccagggtccctcggctccctcccgatgagaagaagcaaatggttgccaac
gtggagaaacagcttgaagaggccagagaattgcttgaacagatggatttggaagtccga
gaaattccacctcagagtcgagggatgtacagcaacagaatgcgaagctacaagcaagaa
atgggcaagctggaagcagagtttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaactcctcagagaaccagttgataaaattccgtgaa
gagagggcacatctgctggataacacggagaggctggaaaggtcatcgcggagactagag
gctgggtaccagatagcagtggaaaccgagcaaatcggccaagagatgttagaaaacctg
agtcatgacagagaaaagatacagcgagcacgtgaacgacttcgggagacagatgcaaac
ttggggaaaagctccaggatcctgacggggatgttgcgaagaatcatccaaaaccgcatc
ctgctagtcatcctggggatcatcgtggtcatcaccatcctgacggccatcactttgttt
gtcaaaggacactga
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