Phodopus roborovskii (desert hamster): 127233275
Help
Entry
127233275 CDS
T08852
Symbol
Nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04010
MAPK signaling pathway
prob04064
NF-kappa B signaling pathway
prob04380
Osteoclast differentiation
prob04625
C-type lectin receptor signaling pathway
prob05134
Legionellosis
prob05166
Human T-cell leukemia virus 1 infection
prob05169
Epstein-Barr virus infection
prob05200
Pathways in cancer
prob05203
Viral carcinogenesis
prob05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127233275 (Nfkb2)
04064 NF-kappa B signaling pathway
127233275 (Nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127233275 (Nfkb2)
09158 Development and regeneration
04380 Osteoclast differentiation
127233275 (Nfkb2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127233275 (Nfkb2)
05203 Viral carcinogenesis
127233275 (Nfkb2)
09162 Cancer: specific types
05224 Breast cancer
127233275 (Nfkb2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
127233275 (Nfkb2)
05169 Epstein-Barr virus infection
127233275 (Nfkb2)
09171 Infectious disease: bacterial
05134 Legionellosis
127233275 (Nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127233275 (Nfkb2)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127233275 (Nfkb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
127233275
NCBI-ProteinID:
XP_051055642
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MDRCYDPGLHGIADYDDFEFSPSIVEPKDPAPETVDGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSSPQGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGSAGGYGGTGGGGSLGFFPSLTYSPYQSGAAPMGCYQGGGGGAQMAGSGRGVDAGEAAK
DPSALPEVPQGEPPALDALQRAREYNARLFGLAQRSARALLDYGVTADARALLAGQRHLL
TAQDENGDTPLHLAIIHEQTSVIEQIALVIYHAQYLGVINITNHLYQTPLHLAVITGQTR
VVSFLLQVGADPTLLDRHGDSAVHLALRAGAKAPDLLRALLHSGAHAVPQILHMPDFAGL
YPVHLAVHARSPECLDLLVDRGAEVEAAERQGGRTPLHLATEMEELGLVTHLITKLHANV
NARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSEGPE
RDSQRHFRGHTPLDLTCSTKVKSLLLNAAQNTMEPPLAPCSPAGPGLSLGDAALQNLEQL
LDGPEAQGSWAELAERLGLRSLVDTYRKTPSPSGSLLRSYQLAGGDLVGLLEALKDMGLH
EGVNLLEGPETRDKLPSTAEAKEDSAYGSQSVEQEAEKLCPPPEPPGGLCHGHPQPQVH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggacagatgctacgacccaggtctgcatggcatcgccgattatgatgattttgaattc
agcccctccattgtggagcccaaggacccagccccagagacagttgatggcccctatctg
gtgattgtggagcagcccaagcagcgtggcttcagatttcgatatggctgtgagggcccc
tcgcatggaggcctaccaggtgcctccagtgagaagggccggaagacctatcctactgtc
aagatctgtaactacgagggaccagccaagattgaggtggacctggtaacacacagcgac
ccgcctcgtgcgcatgcccacagcctggtgggcaagcagtgctcagagctgggggtctgt
gccgtgtctgtaggacccaaggacatgactgctcaattcaataatctgggtgtcctacat
gtaaccaagaagaacatgatggagattatgattcaaaaacttcaaaggcagcggcttcgt
tccagtccgcagggccttacagaggcggagcggagggagctagagcaggaggccaaggag
ctgaagaaagtaatggacctgagcattgtccggctgcgcttctccgctttccttcgggct
agcgacggctccttctccttgcccctgaaaccagttatctcccagcccatccatgacagc
aagtctccaggggcctcaaacctgaagatttcccgaatggacaaaacagcaggatctgtg
cgcggtggagacgaagtttatttgctttgtgataaagtgcagaaagatgacattgaggtc
cggttctacgaggatgacgagaacgggtggcaagcctttggggacttctctcccacagac
gttcataaacagtatgccattgtgttccggacaccgccctatcacaagatgaagatagag
aggcctgtaacggtgttcctgcagctgaaacgcaagcgtgggggggatgtctccgactcc
aaacagttcacctattaccctctggtggaagacaaggaggaagtgcagcggaagcggagg
aaggccttgcccaccttctcccagcccttcgggggcggatcccacatgggcgggggttct
gggggctctgctgggggttatggaggcactggaggaggtggcagcctcggctttttcccc
tccttgacctacagtccctaccagtccggcgcagccccaatgggctgctaccagggtggc
gggggcggagcgcagatggccggctctgggcggggcgtggacgctggggaggcggcgaag
gatccgagtgcgctccccgaggtcccccagggcgaaccgccggccctcgacgcgctgcag
cgagctcgcgagtacaacgcgcgcctgttcggtctggcgcagcgcagcgcccgagcgttg
ctggactacggcgtcaccgcggacgcgcgcgctctgctggcgggacagcgccacctgctg
acggcccaggacgagaacggagacacaccgctgcacctggccattatccatgagcagact
agtgtcattgaacagatagcccttgtcatctaccatgcccagtaccttggggtcatcaac
atcactaaccacctgtaccagacacctctgcacctagcagtaatcactgggcagacgagg
gtggtgagcttcctgttgcaggtgggtgcagaccccacactgctggatcggcatggagac
tcagctgtgcacctggctctgcgggcaggtgctaaagccccagacctgttgcgggcgttg
ttgcatagtggggcccatgctgtgccccagatactgcacatgcctgattttgcaggacta
tacccagtccatctggctgttcatgcccggagccctgagtgcctggatctgctagttgac
agaggggctgaggtggaggcagcagagagacaagggggccggacacccctgcatctagcc
acggagatggaggagctggggttggtcacccacctgattaccaagctccatgctaatgtg
aacgcccggacatttgctggaaatacacccctccacctggcagctggacttggatcccca
accctcactcgcctcctcctaaaggctggtgctgacatccatgcagagaacgaggagcct
ctgtgccctctgccctcaccccccacctctgggagcgactctgactctgaggggcctgag
agagattcccagagacacttccgggggcatacacctcttgacctcacgtgcagcacgaag
gtgaagagtctgctactgaatgctgctcagaacaccatggagccgcccctggccccatgc
agccctgcagggccagggctgtccctgggggacgcagccctgcagaatctggagcagctg
ctagatgggccagaagcccagggcagctgggcagaactggcagagcggctggggctgaga
agtctggtggacacatacaggaagaccccctcacccagcggcagcctcctgcgcagttac
cagctggctggtggggatttggtgggtctgctggaggccttgaaggacatgggtctgcac
gagggagtgaacctgctagaaggccctgagacccgggacaagctgcccagcacagcagag
gccaaagaagacagtgcctatgggagccagtcagtggaacaggaggccgagaagctgtgt
ccaccccctgagccaccgggagggctctgccatgggcacccccagcctcaggtgcactga
DBGET
integrated database retrieval system
