KEGG   Phodopus roborovskii (desert hamster): 127233387
Entry
127233387         CDS       T08852                                 
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127233387 (Exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prob03019]
    127233387 (Exosc1)
Messenger RNA biogenesis [BR:prob03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     127233387 (Exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     127233387 (Exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 127233387
NCBI-ProteinID: XP_051055791
UniProt: A0AAU9ZWI3
LinkDB
Position
Unknown
AA seq 195 aa
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcaccacctgtgagatactgcatccctggcgagcgtctgtgtaacttggaggaaggc
agccccggtagcggcacctacacacggcacggctacatcttttcgtcgctggcgggctgc
ctgacgaagaccagcgagaatggcgcgcttcctgtggtatctgtgatgagagaaacagag
tcccagttactgccagatgtaggagctgttgtcacctgtaaggtctctagcatcaactca
cgttttgccaaagtccacatcctgtatgtggggtccacgccactgaaaaatgcttttcga
ggaactatccgcaaggaagatatccgagcaactgaaaaagacaaggttgaaatttacaag
agtttccgcccgggtgacatagttttggccaaagttatctccctgggtgatgcacaatcc
aattacctgctgaccactgctgaaaatgagttaggggtagtagtggcccacagtgaatca
ggggtccagatggttcccataagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccgcaaagtggccagagtgcagcctgagttcttacaaacctaa

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