Phodopus roborovskii (desert hamster): 127233387
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Entry
127233387 CDS
T08852
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127233387 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127233387 (Exosc1)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127233387 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
127233387 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
127233387
NCBI-ProteinID:
XP_051055791
UniProt:
A0AAU9ZWI3
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacctgtgagatactgcatccctggcgagcgtctgtgtaacttggaggaaggc
agccccggtagcggcacctacacacggcacggctacatcttttcgtcgctggcgggctgc
ctgacgaagaccagcgagaatggcgcgcttcctgtggtatctgtgatgagagaaacagag
tcccagttactgccagatgtaggagctgttgtcacctgtaaggtctctagcatcaactca
cgttttgccaaagtccacatcctgtatgtggggtccacgccactgaaaaatgcttttcga
ggaactatccgcaaggaagatatccgagcaactgaaaaagacaaggttgaaatttacaag
agtttccgcccgggtgacatagttttggccaaagttatctccctgggtgatgcacaatcc
aattacctgctgaccactgctgaaaatgagttaggggtagtagtggcccacagtgaatca
ggggtccagatggttcccataagctggtgtgagatgcagtgccctaagacccacactaaa
gaattccgcaaagtggccagagtgcagcctgagttcttacaaacctaa
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integrated database retrieval system