Phodopus roborovskii (desert hamster): 127233411
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Entry
127233411 CDS
T08852
Symbol
Trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prob03016
]
127233411 (Trub1)
Enzymes [BR:
prob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
127233411 (Trub1)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127233411 (Trub1)
Prokaryotic type
127233411 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
127233411
NCBI-ProteinID:
XP_051055832
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MAAAQAEVESSLNAHSAPGAAGTAVSPVAADAAAAAAAPTGSQAQVSKAALAAKLLSLSG
VFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWNKRQRQTLKLGHGGTLDSAAQGVLVV
GIGRGTKMLTSMLSGSKRYTAIGELGKATDTLDSTGKVTDEKPYDKITREDIEGVLQKFT
GNIMQVPPLYSALKQGGQRLSALMKRGEAVEARPARPVTVYSISLLSCQLPLFTLDVECG
GGFYIRSLVNDIGRELSSCAHVLELTRTKQGPFTLEEHALPEGRWTIDDIARSLEHCTSL
LPDELAFKKPKSEKCSDQALSYEYITLSETKRAEDATKTL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcccaggcagaggtggagtcatctctgaatgcacactcagccccaggtgct
gcagggacagccgtgagccctgtagccgcagatgcagccgcagcggcagcggccccgacc
ggatcgcaagcccaggtctccaaggccgccctggctgctaagctgctgtcgctcagcggc
gtgttcgccgtgcacaagcccaaagggcccacgtcagccgagctgctgaatcggctgaag
gagaagctgctggcagaagctggaatgccttccccagaatggaacaagaggcaaaggcag
acactgaaacttggacatggagggacactggacagtgctgcacaaggtgttctggtggtt
ggaattggaagaggaacaaaaatgttgaccagtatgttgtcggggtccaagaggtatact
gccattggagagctggggaaagctacggacacgctggattctaccgggaaggtgacagat
gagaagccgtacgataaaataacacgagaagatattgaaggcgttctgcagaagtttaca
gggaatataatgcaagtacccccactctattctgcactgaagcagggtgggcagaggctt
tcggcgttgatgaagagaggggaagcggtggaggccagacccgccaggccagtgaccgtg
tacagcatctccctcctgagctgccagctaccactcttcaccctggatgttgaatgtgga
ggcggcttctacatcagaagcttggtcaatgacattggcagagaactctcttcctgcgcc
cacgtgctggagctgacgcgcaccaaacaggggccatttacacttgaagagcacgccctc
cccgaaggcagatggaccatcgatgacatcgcacggtcccttgaacactgcacgtctctt
ttgccagatgagttggcgttcaaaaaaccaaaatctgagaaatgcagtgaccaggcttta
agctatgaatatataactctaagcgagacaaagagagcggaggatgcgaccaagacgctc
tga
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