Phodopus roborovskii (desert hamster): 127233420
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Entry
127233420 CDS
T08852
Symbol
Myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127233420 (Myof)
Membrane trafficking [BR:
prob04131
]
Endosome - Lysosome transport
Others
Ferlins
127233420 (Myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
NagJ_C
Motif
Other DBs
NCBI-GeneID:
127233420
NCBI-ProteinID:
XP_051055857
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MLRVIVESATNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPIWNEILEFDLRGIPLD
SSSSLVIVVKDFETIGQNKLIGTATVSLKDLIGDQNRSLPYKQISLLNEKGQDTGATIDL
VIGYSPPSAPHPNDPSGTNVSGMGEEEEEDQGDEDRVDGMVRGPGPKGPAGTLSEAQLAR
RITKGKNSRRMLSNKPQDFQIRVRVIEGRQLCGNNIRPVVKVHICGQTHRTRIKRGNNPF
FDELFFYNVHITPSELMDEIISIRVYNSHSLRADCLMGEFKIDVGFVYDEPGHAVMRKWL
LLNDPEDASSGAKGYMKVSMFVLGTGDEPPPEKRDRDNDSDDVESNLLLPAGIALRWVTF
LLKIYRAEDIPQMDDAFSQTVKEIFGGNADKKNLVDPFVEVSFAGKKVCTNIIERNANPE
WNQIVNLQIKFPSMCEKIKLTVFDWDRLTKNDVVGTTYLYLSKIAASGGEVEDFSSSGTG
AASYTANTGETEVGFVPTFGPCYLNLYGSPREYTGFPDPYDELNTGKGEGVAYRGRILVE
LTTLLEKKPPEKKLEPISNDDLLVVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIG
NYGNKFDATCKPLASTTQYSRAVFDGNYYYYLPWAHTKPVVTLTSYWEDISHRLDAVNTL
LVMAERLQSNIEAVKSGLQGKIPANQLAELWLKLIDEVIEDTRYTLPVTDGKANVTILDT
QIRKLRSRFLSQIHEAAMKMRSEATDVKSTLLEIEDWLDKLMQLTEEPQNSMPDIIIWMI
RGEKRLAYARIPAHQVLYSTSGGNASGKYCGKTQTILLKYPQEKSNGPKVPVELRVNIWL
GLSAVEKKFNSFAEGSFTVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKKEFFL
PPKGWEWEGDWIVDPERSLLTEADAGHTEFTDEVYQNENRYPGGEWKPAEDTYTDANGDK
AASPSELTCPPGWEWEDDAWIYDINRAVDEKGWEYGITIPPDNKPKSWVAAEKMYHTHRR
RRLVRKRKKDLTQTASSTARAMEEFEDREGWEYASLIGWKFHWKQRSSDTFRRRRWRRKM
APSETHGAAAIFKLEGALGADTTEDGDEKSLEKQKHSATTVFGANTPIVSCNFDRVYIYH
LRCYIYQARNLMALDKDSFSDPYAHVSFLHRSKTTEIIHSTLNPTWDQTIIFDEVEIFGE
PQTVLQNPPKVIIELFDNDQVGKDEFLGRSICSPLVKLNSETDVTPKLLWHPVMNGDKAC
GDVLVTAELILRNKDGSNLPILPSQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNYQ
MASITSPSLVVECGGERVESVVIKNLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVIDH
RQFGRKPVVGQCTIDHLDRFRCDPYAGKEDIVPQLKASLMSAPPCRDVVIEIEDTKPLLS
SKCLSSMSTALSKMASPRTVHLSEKEEEIVDWWSKFYASSGEHEKCGQYIQKGYSKLKIY
DCELEDVADFEGLTDFSDTFKLYRGKSDENEDPSVVGEFKGSFRIYPLPDDPSVPAPPRQ
FRELPDSVPQECTVRIYIVQGLALQPQDNNGLCDPYIKITLGKKVIEDRDHYIPNTLNPV
FGRMYELSCYLPQEKDLKISVYDYDTFTRDEKVGETIIDLENRFLSRFGSHCGIPEQYCV
SGVNTWRDQLRPTQLLQNVARFKGFPPPVLSEDGSRIRYGGRDYHLDEFEANKILHQHLG
APEERLALHILRTQGLVPEHVETRTLHSTFQPNISQGKLQMWVDVFPKSLGPPGPPFNIT
PRKAKKYYLRVIIWNTKDVILDEKSITGEDMSDIYVKGWISGSEENKQKTDVHYRSLDGE
GNFNWRFVFPFDYLPAEQLCIVSKKEHFWSIDQTEFRVPPRLIIQIWDNDKFSLDDYLGF
LELDLHHTIIPAKSSEKCNLDMIPDLKAMDPLKAKTASLFEQKSMKGWWPCYADKDGSRV
MAGKVEMTLEVLNEREADERPAGKGRNEPNMNPKLDPPNRPETSFLWFTNPCKTMRFIVW
RRFKWVIIGLLLLLILLLFVAVLLYSLPNYLSMKIVRPNA
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgagtgattgtggaatctgccactaacatccctaaaacgaaatttgggaaaccg
gatcctatcgtttctgtcatctttaaggatgagaaaaagaaaacaaagaaagttgataat
gaactgaaccccatctggaatgagattttggaatttgacttgagagggataccgctggac
tcttcatcttcccttgtgattgttgtcaaagactttgagacaattggacaaaataaatta
atcggcacagcaacagtctccctgaaggacctgatcggggaccagaacagatccttgccc
tacaaacagatctctctgctaaatgaaaagggacaagacactggggccaccattgacctg
gtgatcggctatagcccaccttcagctccacatccgaatgacccgagtgggaccaacgtg
tcaggcatgggtgaagaagaggaagaagaccagggagatgaagacagagtagatggcatg
gtcaggggccctggacccaaggggccggctggcacactgtcagaggctcagcttgctcgg
aggatcaccaagggaaagaatagccggcggatgctgtccaacaagccacaggatttccag
atccgtgtccgggtgattgagggccggcagttatgtggcaacaacataaggcccgtggtg
aaagtccacatctgtggtcagacacaccgaacaagaatcaagagagggaacaatccattt
tttgacgagttatttttctacaatgtgcatatcacaccttccgaactcatggatgagatc
atcagtatccgggtctataattcccattccttgagggcagactgtctgatgggggaattt
aagattgatgttggatttgtatatgatgaacctggccatgctgtcatgaggaaatggctt
cttctgaatgacccagaagatgccagctcaggtgcaaaaggttacatgaaagtcagcatg
tttgtcctgggaactggagatgaaccccctcctgagaaacgagatcgtgacaatgacagt
gatgacgtggagagcaacttgttacttccagctggcatagccctccggtgggtaaccttc
ttgctgaagatctaccgcgctgaggatatcccccagatggatgatgccttctcccagacg
gtgaaggaaatatttggtggcaacgcagataagaaaaatcttgtggatccgtttgtagaa
gtctcctttgctgggaaaaaggtttgcacaaatataattgagagaaatgcaaaccccgaa
tggaatcaaattgtcaatcttcagatcaagtttccctccatgtgtgaaaaaataaaacta
acagtatttgactgggaccggcttaccaaaaatgatgttgttgggacaacatatctatat
ctttctaaaattgctgcctctgggggagaagtagaagatttctcctcttcgggaactggg
gctgcgtcatatacagcaaacacaggagagacagaggtgggctttgtcccaacatttgga
ccttgttatctgaacctctatggaagtcccagagagtacacgggattcccggacccctat
gatgagctgaatacagggaagggagaaggtgtagcctacagaggcaggatcttggttgaa
ctgaccactttacttgaaaaaaaaccaccagaaaagaagcttgagcccatttcaaatgac
gaccttctggtcgttgagaaataccagcgaaggcggaaatacagcctgtctgctgtattc
cattcagccaccatgttgcaagatgttggtgaggctattcagtttgaagtcagcattggg
aattatggcaacaagtttgatgcaacctgtaaacccttggcgtcaacgactcaatacagc
cgtgcggtatttgatgggaactactattactacttaccttgggcccacacaaagcccgtg
gtcaccctgacttcctattgggaggatattagtcatcgcctggatgcagtgaacactctt
ctagtcatggcagaacggctgcaatcgaacatagaggctgtaaaatcagggctccaaggc
aaaattcctgcaaaccagctggcggagctgtggctgaagctgatagatgaagttatagaa
gacacgagatacaccttgcctgtcacagatggaaaagccaatgtcacaattctcgatact
cagatccggaagttgcggtccaggtttctctcccaaatccacgaggcagctatgaagatg
agatctgaggccaccgatgtgaagtccaccttgctggaaatcgaggactggcttgataaa
ttaatgcaactcactgaggagcctcagaacagtatgcccgacattatcatctggatgatc
cgtggagagaaaagactggcttatgcacgaattcctgcccatcaagtcttatactccacc
agtggtgggaacgcttctggaaaatactgtgggaaaacccagaccatccttctgaagtat
ccacaagaaaaaagcaatgggcccaaagtgcccgtggaattgcgagtgaatatctggctg
ggtctaagcgccgtggagaagaagttcaatagcttcgctgaaggctccttcaccgtcttc
gctgaaatgtatgaaaaccaagctctcatgtttgggaaatggggcacatctggactggtg
ggacgccataaattctctgatgtcacaggaaagataaaactcaaaaaggaattctttctg
cctcccaaaggctgggagtgggaaggagactggatagttgaccccgaaagaagcctcctg
actgaggctgacgcaggtcacacggagttcacagatgaagtctaccagaatgagaatcgc
tatcctggaggcgagtggaagccagcagaggacacctatacggatgcgaatggagataag
gcagcatcgcccagtgagctgacttgccctccgggttgggagtgggaagatgacgcgtgg
atatatgacataaatcgagcagtggatgagaaaggctgggagtatggaattaccattcct
cctgacaacaagcccaaatcctgggttgccgcagagaaaatgtatcacacgcatagacgg
cggagactggtccgaaaacgcaagaaagatttgacccaaacagcttcaagtactgcaagg
gctatggaagaattcgaagaccgggagggctgggaatacgcttcgttaattggctggaaa
ttccactggaaacagcgcagttcagacacctttcgccgcaggcgctggaggagaaaaatg
gctccttcagaaacacacggtgctgctgccatctttaaacttgaaggtgcccttggggca
gacaccacagaggatggagatgagaagagcttagaaaagcagaagcacagtgccaccact
gtgtttggagcaaacacgcccattgtctcctgtaattttgaccgagtctacatctatcac
ctgcgctgctacatttatcaagctaggaacctcatggctttggacaaagacagcttttca
gatccatatgctcatgtctcctttctccatcgaagcaaaaccacagagatcatccactcc
accctgaatcccacctgggaccaaacaattatttttgatgaggttgaaatctttggggaa
ccccaaacagttctacagaacccacccaaagttatcatagaactttttgacaatgaccaa
gtgggcaaagatgaatttttaggacgaagcatttgttctcctttggtaaaactgaactcg
gaaacagatgtcacacccaagcttctctggcacccagtcatgaatggagacaaggcctgt
ggggacgtccttgtaacagccgagctgattctgaggaacaaggatggctccaaccttcct
attcttccctctcaaagagcaccaaatttatacatggtccctcaaggtatccggcctgtg
gttcaactcactgctattgagattctagcttggggcttaagaaatatgaaaaactaccaa
atggcttctatcacatcccccagtctggtggtggagtgtggaggggaaagagtagaatct
gtggtgatcaaaaacctgaagaagacacccaacttcccaagttctgttctcttcatgaaa
gtgtttttacccaaggaagaactgtacatgcctccactggtgatcaaagtcattgaccac
aggcagtttgggcggaagcctgtggttggccagtgtaccattgaccacctggaccgcttt
cgctgtgatccgtatgcaggaaaagaagatatcgtaccacaactaaaagcctcccttatg
tctgcacctccatgccgagatgtcgttattgaaatagaagacaccaaaccattattgtct
tctaagtgcttaagcagtatgtcaacagcactcagcaaaatggcttctccaaggacagtg
catctgtcagaaaaggaagaagaaatcgttgactggtggagtaaattttatgcttcttcg
ggggaacatgaaaaatgtggacagtatattcagaaaggctattccaaactcaagatctat
gactgtgaactggaggatgtagccgactttgagggcctgacagatttctcagataccttc
aagttgtaccgaggcaagtccgatgagaacgaagatccatctgtggtcggagagtttaaa
ggctccttccgaatttaccccctgcccgatgaccccagcgtgccagcccctcccaggcag
tttcgggaactgcctgacagtgtcccacaggaatgcacggttaggatttacattgttcaa
ggcttagcgctccagccccaggacaacaatggcctgtgtgatccttacattaaaataacc
ctgggcaagaaagtaattgaagaccgagaccattacattcccaacacgctcaacccagtg
ttcggcagaatgtatgaactgagctgctacttgcctcaggagaaagacctgaaaatctct
gtctatgactacgacaccttcacgcgagacgagaaagtgggagaaacaatcatcgacctg
gagaaccgcttcctttcccggttcgggtcccactgtggcattcctgagcagtactgtgtt
tctggagtaaacacctggcgagatcagctgagaccaacacagttgcttcagaatgtagcc
agattcaaaggcttcccaccgccagtcctttctgaagatggaagcagaatccggtatgga
ggacgagactaccatctggatgaatttgaagccaacaaaatcctgcaccagcaccttggg
gcccctgaagagcgtcttgccctccatattctcaggactcaggggctggtccctgagcat
gtggagacaaggactctgcacagcactttccaacccaacatttcacagggaaaacttcag
atgtgggtggatgtcttccccaagagcttaggaccaccaggcccccctttcaacatcact
cccaggaaagccaagaagtactacctgcgtgtgatcatctggaataccaaggacgttatc
ttggatgagaagagcatcacaggggaagacatgagtgacatctacgtcaaaggctggatt
tccggcagcgaagaaaacaaacagaaaacagatgtccactacaggtctttggatggcgaa
ggcaattttaactggagatttgttttcccatttgactacctccccgctgagcagctctgt
atagtctctaaaaaagagcatttctggagcattgatcaaacagaatttcgagtgccccct
cgactgatcattcagatttgggacaatgacaagttttccctggatgactacttgggtttc
ctggagcttgacttacatcacacgatcatcccagccaagtcgtcagagaagtgcaatttg
gacatgattccagacctcaaagccatggaccctcttaaagctaagactgcctcgctcttt
gagcagaaatccatgaagggatggtggccatgctacgcagacaaagatggctcccgtgtg
atggctgggaaagtggagatgacgctggaggtcctcaacgagagggaggcagacgagagg
ccagctgggaaggggcggaatgaacccaacatgaaccccaaactcgacccaccaaaccgg
ccggaaacctccttcctctggttcacaaacccatgcaagaccatgcgcttcatcgtgtgg
cgccgtttcaagtgggtgatcatcggcctgcttctgctgctcatcctgctgctgtttgtg
gctgtactcctgtactcattgccgaactatttatcaatgaagatcgtgaggccgaatgca
taa
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