Phodopus roborovskii (desert hamster): 127233627
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Entry
127233627 CDS
T08852
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prob02000
]
127233627 (Tmc1)
03037 Cilium and associated proteins [BR:
prob03037
]
127233627 (Tmc1)
Transporters [BR:
prob02000
]
Other transporters
Pores ion channels [TC:
1
]
127233627 (Tmc1)
Cilium and associated proteins [BR:
prob03037
]
Other cilia and associated proteins
Stereociliary proteins
127233627 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
SPT6_acidic
Toddler
Motif
Other DBs
NCBI-GeneID:
127233627
NCBI-ProteinID:
XP_051056124
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MHQLLWSGEEEDKLPRRESLRPKRKRTRDVINEDDPEPEPEDEETRKAREKERRRRLRRG
AEEEEEIDEEELERLKAELDENRQMIATVKCKPWKMEKKIEVLKEAKKFVSENEGALGKG
KGKKWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYG
VNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSVLFY
GYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFVVVLKAMTKNIGDDGGGDDNTFNFSWKV
FCSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENIHLIRFLRFLANFFVFLTLG
ASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLI
ALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNESLSGN
TTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCW
CWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVM
CCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVI
GETLEHDFPSWMAKILRQLSNPGLVIAVVLVMALTIYYLNATAKGQKAANLDLKKKMKMQ
ALENKLRNKKMAAARAAAAAGGQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaactgctgtggtcaggtgaagaagaagataaactacctagaagagaaagcttg
agaccaaagaggaaacggaccagagatgtcatcaatgaagatgatccagaacctgagcca
gaggatgaagaaacaaggaaggcaagagaaaaagaaaggcgaaggaggctgaggagagga
gcggaagaagaagaagaaattgatgaagaagaattggaacgactgaaggcagagttagat
gaaaatagacaaatgattgctactgtcaaatgcaaaccttggaaaatggagaaaaaaatt
gaagttctcaaggaagcaaagaaatttgtgagtgaaaatgaaggggcccttgggaaagga
aaaggaaagaagtggtttgcatttaagatgatgatggccaagaaatgggcaaaattcctt
cgtgacttcgagaacttcaaagctgcttgtgtcccgtgggaaaacaaaatcaaggcaatt
gaaagtcagtttggctcatcagtggcctcatacttcttgttcctgaggtggatgtatggt
gttaacatggttctcttcatcctgacattcagcctcatcatgttaccagagtacctctgg
ggattaccatatggcagcttacctaggaaaacagtcccaagagctgaagaggcatctgca
gccaactttggtgtattgtacgacttcaacggcctggcacagtactctgtcctcttttat
ggctactacgacaataaacgcacgattggatggctgaatttccggctacctctctcctac
ttcctggtggggattatgtgcattggatacagctttgtggttgtcctcaaagcgatgacc
aaaaatattggtgatgatgggggtggtgatgacaatactttcaacttcagctggaaggtt
ttctgcagttgggactatctgattggtaatcctgaaacagctgacaacaaatttaattct
atcacaatgaactttaaggaagccatcatagaagaaagagcggcccaggtggaggagaac
atccacctcatcagattcctgaggtttcttgctaacttcttcgtgttcctaacacttggt
gcaagtggatacctcatcttttgggcggtgaagcgatcccaggaatttgcacagcaagat
cctgacacccttgggtggtgggaaaagaatgaaatgaacatggttatgtccctcctgggg
atgttctgtcccaccctgtttgacttatttgctgaactggaagattaccatccactcatt
gctctgaagtggctgctggggcgcatttttgctcttcttctaggcaacttgtatgtattt
attcttgccttaatggatgagattaacaacaagattgaagaggagaagctcgtgaaagcc
aatattaccctgtgggaagccaacatgattaaggcttacaatgaatctctctctgggaac
accacaggaccacccttttttgttcaccctgcagatgtaccacgaggaccctgctgggaa
acaatggtgggacaggagtttgtgcgactcaccgtttctgatgttctgaccacttatgtc
acgatcctcattggtgatttcctcagagcatgcttcgtgaggttttgcaattactgctgg
tgctgggatttggaatacggatatccttcatacacagaatttgacatcagtggcaatgtc
ctcgcgctgatcttcaaccaaggcatgatctggatgggctccttctttgcccctagcctt
ccaggcatcaacatcctccggctccacacatccatgtatttccagtgctgggctgtgatg
tgctgcaatgttcctgaggccagagtctttaaagcttccagatccaacaacttctacctt
ggcatgctgttgctcatccttttcttgtccacgatgcctgtcctatacatgatcgtctct
ctcccaccatcttttgattgtgggcccttcagtggtaaaaacaggatgtttgaagtcatt
ggtgagaccctggaacatgatttcccgagctggatggcgaagatcctcaggcagctttct
aaccccggcctggtcattgcagtcgttctggtgatggctttgaccatctattatctcaat
gctactgccaagggccagaaagcagcaaatctggatctaaaaaagaagatgaaaatgcaa
gcattggagaacaaactgcgaaacaagaaaatggcagctgctcgagcagctgcagctgct
ggtggccagtaa
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