Phodopus roborovskii (desert hamster): 127233716
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Entry
127233716 CDS
T08852
Symbol
Htt
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob05016
Huntington disease
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
127233716 (Htt)
05022 Pathways of neurodegeneration - multiple diseases
127233716 (Htt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127233716 (Htt)
04131 Membrane trafficking [BR:
prob04131
]
127233716 (Htt)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127233716 (Htt)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127233716 (Htt)
Membrane trafficking [BR:
prob04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127233716 (Htt)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
127233716 (Htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
RPN13_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
127233716
NCBI-ProteinID:
XP_051056233
UniProt:
A0AAV0A0K8
LinkDB
All DBs
Position
Unknown
AA seq
3122 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQPPPPPPPPQPPQPPPQGQAPPLVPPPPPPPLPG
PAEEPLHRPKKELSATKKDRVSHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSDDA
ESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLVRP
QKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIANL
KSGSPTVRRTAAGSAVSICQHSRRTQYFYNWLLNVLLGLLVPVEEEHSTLLILGVLLTLR
CLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSMEQLVQVYELTLHHTQHQDHNVVTGALEL
LQQLFRTPPPELLQALTTPGGLGQLTVVQEEARGRGRSGSIVELLAGGGSSCSPVLSRKQ
KGKVLLGEEEALEDDSESRSDVSSSAFAASVKSEIGGELAASSGVSTPGSVGHDIITEQP
RSQHTLQADSVDLSGCDLTSAATDGDEEDILSHSSSQFSAVPSDPAMDLNDGTQASSPIS
DSSQTTTEGPDSAVTPSDSSEIVLDGADSQYLGMQIGQPQEEDEEEAAGVLSGEASDVFR
NSSLALQQAHLLERMGHSRQPSDSSIDKFVPRDEAAEASDPESKPCRIKGNIGQPNDEDS
APLVHCVRLLSASFLLTGERKALVPDRDVRVSVKALALSCIGAAVALHPESFFSKLYKVP
LDTMEAAEEQFVSDVLNYIDHGDPQVRGATAILCGTLVCSILNRSRLRVGDWLGTIRTLT
GNTFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCLLSLCSSSYSDLGLQLLIDMLPLKN
SSYWLVRTELLETLAEIDFRLVSFLEAKAGSLHRGAHHYTGFLKLQERVLNNVVIYLLGD
EDPRVRHVAAASLTRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQPPSHFSVS
TITRIYRGYSLLPSITDVTVENNLSRVVAAVSHQLITSTTRALTFGCCEALCLLSAAFPV
CTWSLGWHCGVPPLSASDESRKSCTVGMASMILTLLSSAWFPLDLSAHQDALILAGNLLA
ASAPKSLRSSWTSEEEANSAATRQEEVWPALGDRTLVPMVEQLFSHLLKVINICAHVLDD
VTPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQVSAPMSPKKGGETSTASRQSDTSGP
VTASKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSALDVLSQIL
ELATLQDIGKCVEEVLGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQFDGLSSNPSKS
QCRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDASGWFDVLQKVS
AQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVLDLLAQLVQL
RVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHSKQIIGIP
KIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVVVSMLLRL
IQYHQVLEMFILVLQQCHKENEDKWKRLSRQVADIILPMLAKQQMHIDSHEALGVLNTLF
EILAPSSLRPVDMLLRSMFITPSTMASVSTVQLWISGILAILRVLISQSTEDIVLSRIQE
LSFSPYLISCPVISRLRDGNSNSTLGERSEGKQTKNLPEETFSRFLLQLVGILLEDIVTK
QLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTSDGCEGSFYTLESL
NARVRSMVPTHPALVLLWCQILLLINHTDHRWWAEVQQTPKRHSLSCTKSLNPQMFGEEE
DSGSAAQLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISLSHEPPVQD
FISAIHRNSAASGLFIQAIQSRCENLSSPTTLKKTLQCLEGIHLSQSGAVLTLYVDRLLG
TPFRALARMVDTLACRRVEMLLAANLQSSMAQLPVEELNRIQEHLQNSGLAQRHQRLYSL
LDRFRLSTVQDSVSPLPPVTSHPLDGDGHTSLETVSPDKDWYLQLVRSQCWTKSDSALLE
GAELVNRIPAEDMNDFMMSTEFNLSLLAPCLSLGMSEIATGQKSPLFEAARGVTLDRVTS
VVQQLPAVHQVFQPFLPTEQTAYWSKLNDLLGDATLYQSLTTLARALAQYLVVVSKVPAH
LHLPPEKEGDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLALQVPGLWGVLSSP
GYVTHACSLIHCVRFILEAIAVQPGDQLLGPESRSSTPRAVRKEDVDSNIQSPSYVTSAC
QMVAEMVESLQSVLALGHKRNSNLPSFLTALLKNIVISLARLPLVNSYTRVPPLVWKLGW
SPKPGGDFGTVFPEIPVEFLQEKEILKEFIYRINTLGWTSRTQFEETWATLLGVLVTQPL
VMEQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRNKPLKALD
TRFGRKLSMIRGIVEQEIQEMVSQRENTATHHSHQAWDPVPSLLPATTGALISHDKLLLQ
INPERELGNMSYKLGQVSIHSVWLGNNITPLREEEWDEEEEEEADVPAPSSPPLSPVNSR
KHRAGVDIHSCSQFLLELYSRWILPSSAARKTPVILISEVVRSLLVVSDLFTERTQFEMM
YLTLTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKTVAEPVSRLLESTLRSSHLPSQI
GALHGILYVLECDLLDDTAKQLIPVVSDYLLSNLKGIAHCVNVHSQQHVLVMCATAFYLM
ENYPLDVGPEFSASVIQMCGVMLSGSEESTPSIIYHCALRGLERLLLSEQLSRLDTESLV
KLSVDRVNVQSPHRAMAALGLMLTCMYTGKEKASPGRTSDPSPATPDSESVIVAMERVSV
LFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQLMATVVYKVF
QTLHTAGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFLVSASTSPWVSALLPHVISRM
GKLEPIDVNLFCLVATDFYRHQIEEEFDRRAFQSVFEVVAAPGSPYHRLLACLRNVHKVT
TC
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctggaaaagctgatgaaggctttcgagtcgctcaagtcgttccagcagcag
cagcagcaacagcagcagcagccgccaccgccgccgccgccgcctcagccccctcagccg
ccgcctcaggggcaggcgccgccgcttgtaccgccgccgccgccgccgccgctgccgggt
ccggccgaggagccgctgcaccgaccaaagaaggaactctcagccaccaagaaggaccgt
gtgagtcattgtctaacaatatgtgaaaacatcgtggcacagtctctcagaaattctcca
gaatttcagaaactcttgggcattgctatggagctgtttctgctgtgcagtgacgatgca
gaatcagatgtcaggatggtagctgatgagtgcctcaacaaagtcatcaaagctttgatg
gattctaatcttccaaggctacagctagaactctataaggaaattaaaaagaatggtgct
cctcgaagtttacgtgcagccctgtggaggtttgctgagctggctcatctggttcgacct
caaaaatgcaggccttacctggtgaacctacttccatgcctgacccgaacaagtaagaga
cctgaggagtcagttcaggagaccttggctgcagctgttcccaaaatcatggcttctttt
ggaaattttgcaaatgacaatgaaattaaggttcttttgaaagctttcatagcaaatctg
aagtcaggctctcccactgttcgacggacagcagcgggctcagcagtgagcatctgccag
cactcccggaggacacaatacttctacaattggctcctaaatgtgctcctaggtctgctg
gttcctgtagaggaagaacattccactctcctgatccttggtgtgctactcacattgagg
tgtctagtgcccttgctccagcagcaggtcaaggacacaagtctaaaaggcagctttggt
gtgacacggaaagaaatggaagtctctccttctatggagcagcttgtccaggtttatgaa
ctgactttgcatcatacgcagcaccaagaccacaatgtggtgacgggggcactggagctc
ttgcagcagctcttccgcactcctccccctgagctgctgcaagcactgaccacaccaggt
ggtctggggcagctcacggtggttcaagaggaggccaggggccgaggccgcagtgggagc
attgtggaacttttagctggagggggttcctcgtgcagccctgttctctcaagaaagcaa
aaaggcaaagtgctcttaggagaagaagaagccttggaagatgactcagagtccaggtca
gatgtcagcagctcggcctttgcagcctctgtgaagagtgaaattggtggagagctcgct
gcttcttcgggagtctccactcctggttctgtaggtcatgacatcatcaccgagcagcct
cggtcccagcacacacttcaggcagactctgtggatttgtcaggctgtgacttgaccagt
gctgctactgatggggatgaggaggacatcttgagccatagctccagtcagttcagtgct
gttccatctgaccctgccatggacctgaatgatgggacccaggcctcctcaccaatcagt
gacagctctcagaccacaactgaagggcctgattcagctgtgactccttcagacagctct
gaaattgtgttagatggtgctgacagccagtatttaggcatgcaaataggacagccacag
gaggaggatgaggaggaggctgcaggtgtgctttccggtgaagcctcagatgttttcaga
aattcttctctggcccttcaacaggcacacttattggagagaatgggtcatagcaggcaa
ccttctgacagcagtatagacaagtttgtaccaagagatgaagctgctgaagcgagtgac
ccagaaagcaagccttgccgaatcaaaggtaacataggacagcctaacgatgaagattct
gctcctctggtccattgtgtccgccttttatctgcttcctttttgttaactggggaaaga
aaagcactggtcccagacagagatgtgagggtcagtgtgaaggccctggccctcagctgt
attggtgcagctgtggcccttcatccagaatctttcttcagcaaactgtataaagtacct
cttgacaccatggaagctgctgaggaacagtttgtctctgacgtcttgaactacatcgat
catggagacccacaggtccgaggagctactgccattctctgtgggacccttgtctgctcc
atcctcaacaggtcccgactccgtgttggcgactggctgggtaccattagaaccctgaca
ggaaatacattttctctggtggactgcattcctttgctacagaaaactttgaaggatgaa
tcttctgtcacttgcaagttggcttgtacagctgtgaggcactgcctcctgagtctttgc
agcagcagctacagtgacttgggattacaactgctcattgatatgctgcctctgaagaat
agctcctactggttggtaaggactgagctgctggaaacccttgcagagattgacttcagg
ctggtgagttttttggaagcaaaagcaggaagtttacaccgaggggctcatcattataca
gggtttttaaaactgcaagaacgagtgctcaataacgtggtcatttatttgcttggagat
gaagaccccagggtgcgacatgttgccgcagcatcgctaacaaggcttgtcccaaagctg
ttctataaatgtgaccaaggacaggctgatccagtagtggctgtagcaagagatcaaagc
agtgtttacctgaaactcctcatgcatgagacacagccgccatcacacttctccgtgagc
accataaccagaatctacagaggttatagtttgctgccaagtataacagatgtcaccgtg
gaaaacaacctctcaagagttgttgctgcagtttctcaccaactcattacatcgactacc
cgggccctcacgtttggatgttgtgaagccttgtgtcttctttcagcagcctttccggtt
tgcacttggagtttaggttggcattgtggagtgcccccactgagtgcctctgatgagtcc
aggaagagctgcactgttgggatggcctccatgattctcaccttgctttcatcagcttgg
ttcccattggacctctcagcccaccaggatgccttgattttggctggaaacttgcttgca
gccagtgcccccaagtctctgagaagttcttggacctccgaagaagaagccaattcagca
gccaccagacaggaggaagtttggcctgctctgggggatcggacactggtgcccatggtg
gaacagcttttctctcacctactgaaggtcatcaatatctgtgctcacgtcttggatgat
gtgactcctggaccagcaatcaaggcagctttgccttctctaacaaaccccccttctcta
agtcccattcgccgcaaagggaaggagaaagaaccaggagaacaagtttctgctccaatg
agtcccaagaaaggcggtgagaccagtacagcctctcgacaatcagatacctcaggacct
gtcacagcaagtaaatcttcttcactggggagtttctaccatctcccttcctacctcaaa
ctgcatgatgtcctgaaagccactcacgccaactataaggtcaccttagatcttcagaac
agcactgaaaagtttggggggttcctgcgctctgccttggacgtcctctctcagattcta
gagctggcaacactgcaggacattggaaagtgtgttgaagaggtcctaggatatctgaaa
tcctgctttagtcgagagccaatgatggcaactgtctgtgttcagcagctattgaagact
ctgtttgggacaaacttggcctcacagtttgatggcttatcttccaaccccagcaagtct
caatgccgagcacagcgccttggctcttccagtgtgaggccaggtttatatcactactgc
ttcatggcaccgtacacacacttcacgcaggccttggctgacgccagcctgaggaacatg
gtgcaggcggagcaggagcacgatgcctcagggtggtttgatgtactccagaaagtgtct
gcccagttgaagacgaacctcacaagtgtcacaaagaaccgtgccgataagaatgctatt
cacaatcacattagattatttgagcctcttgttataaaagcattgaagcagtacaccaca
acgacatctgtacagttgcagaagcaggttttggatttgctggcacagctggttcagcta
cgggtcaattattgtctgctggattcggatcaggtgttcatcggttttgtgctgaagcag
tttgagtacattgaagtgggccagttcagggaatcagaggcaattattccaaatatattc
ttcttcctggtattgctgtcttatgaacggtaccattcaaaacaaatcattggcattcct
aaaatcattcagctgtgtgatggcatcatggccagtggaaggaaggctgttacacatgcc
atacctgccctgcagcccattgtccatgacctgtttgtgttaagagggacaaataaagca
gatgctggaaaagagcttgaaacccagaaggaggtggtggtgtcgatgctgttaagactc
atccagtaccatcaggtgctggagatgttcatcctcgtcctgcagcagtgccacaaggag
aatgaggacaagtggaaacggctttctcggcaggttgcggacatcatcctgcccatgtta
gccaagcagcagatgcacattgattctcatgaagcccttggagtgttaaataccttgttt
gagattttggctccttcctccctacgtcctgtggacatgcttttgcggagtatgttcatc
actccaagcacaatggcatctgtaagcactgtacagctgtggatatctggaatcctagcc
attctgagggttctcatttcccagtcaaccgaagatatcgttctttctcgtattcaggaa
ctctccttctctccatatttaatttcctgtccagtaattagcaggttaagggatggaaac
agtaattcaacactaggagaacgcagtgaagggaaacaaacaaagaatttgccagaagaa
acattctcaaggtttcttttacagttggttggtattcttttagaagacattgttacaaaa
caactcaaagtggaaatgagtgaacagcagcatacattctattgccaagagctaggcaca
ctgctcatgtgtctgatccacatcttcaaatctggaatgttccggagaatcacagcagct
gccactagactcttcaccagtgatggttgtgaaggcagcttctatactctagagagccta
aatgcacgggttcgatctatggtgcccacacacccagctctggtactgctctggtgtcag
attctactgctcatcaaccacactgaccaccgatggtgggcggaggtgcagcagacaccc
aaaaggcacagtctgtcctgcacgaagtcacttaacccccagatgtttggtgaagaggag
gattctggttcagcagctcaacttggaatgtgcaatagagaaatagtgcgaagaggggcc
cttattctcttctgtgattatgtctgtcagaatcttcatgactcagaacacttaacgtgg
ctcattgtgaaccacattcaagatctgatcagcctgtcccatgagcctccagtacaagac
tttattagtgccattcatcgtaattctgcggctagtggccttttcatccaggcaatccag
tctcgttgtgaaaatctttcatctccaaccactctgaagaaaacgcttcaatgcttggaa
ggcatccatctcagccagtctggtgctgtgctcacactatacgtggacaggctcctggga
actcccttccgtgcgctggctcgcatggttgacactctggcctgtcgccgggtagaaatg
cttttggctgcaaatttacagagcagcatggcccagttgccagtggaggaactgaacaga
atccaggagcacctccagaatagcgggcttgcacaaagacaccaaaggctctattccctg
ctggacaggttccgactctctaccgtgcaggactcagttagccccttgcccccagtcact
tcccacccactggatggggatgggcacacatctctggaaacagtgagtccagacaaagac
tggtaccttcagcttgtaagatcccagtgttggaccaaatcagattctgcactgctggaa
ggtgcagagttggtgaatcgcatccctgctgaagacatgaatgacttcatgatgagcacg
gaattcaacctaagccttttggctccctgcttaagccttggcatgagcgagattgccact
ggccagaagagtcctctttttgaagcagcccgaggggtaactctggaccgggtgaccagt
gttgttcagcagcttcctgctgtccatcaagtcttccagcctttcctgcctacagagcag
acagcctactggagcaagttgaatgatctgcttggtgatgctacattgtaccagtctctg
accacacttgcccgtgccttggcacaatacctggtggtggtctccaaagtgcctgctcat
ttgcaccttccccctgagaaggagggggacacagtgaagtttgtggtaatgacacttgag
gccttgtcatggcatttgatccatgagcagatcccactgagtctggacctccaagccggg
ctagactgctgctgtctggcactacaggtgcctggcctctggggggtgctgtcttcccca
gggtatgtgacccatgcctgctccctcatccactgcgtgcgattcatcctggaagccatt
gcagtgcagcctggggaccagcttctcggtccagaaagcaggtcaagtactccaagggct
gtcagaaaggaagatgtagactcaaacatacaaagtcccagttacgttacttcagcctgc
cagatggtagcagagatggtggaatccctgcagtcagtgctggccttggggcacaagagg
aacagcaacttgccttcatttctcacggcattgctgaagaatattgtcatcagtctggca
cgccttcccctagtcaacagctacacgcgtgtgccccctctggtatggaaacttgggtgg
tcgcccaaacctggaggagactttggcacagtgtttcctgagatccctgtagaattcctc
caggagaaggagatcctcaaggagttcatctatcgcatcaacaccctagggtggaccagt
cgtacccaatttgaagaaacttgggccaccctccttggtgtcctggtgacccagcctctg
gtgatggagcaggaggagagcccaccagaggaagacacagaaaggacccagatccatgtc
ctggctgtgcaggccatcacctctttagtactcagtgcaatgactgtgcccgtggctggc
aatccagctgtaagctgcttggaacaacagccccggaacaagcccctgaaggctctcgat
accagatttggaagaaagttgagcatgatcagagggattgtagaacaagagatccaagaa
atggtttcccagagagagaatactgccactcaccattctcaccaggcatgggatcctgtc
ccttccctgttgccagctactacaggtgccctcatcagccatgacaagctactgctgcag
atcaacccggagcgggagctaggcaacatgagctacaagctgggtcaggtatccatacac
tctgtgtggctggggaacaacatcacacctctgagagaggaggaatgggatgaagaggag
gaggaagaggctgatgtccctgcaccatcatcaccacctctgtctccagtcaattccaga
aaacaccgtgctggggttgatattcactcctgttcgcagtttctgcttgaattgtacagt
cgctggatcctgccatctagtgcagccagaaagacccctgttatcctgatcagtgaagtg
gttcgatctcttctcgtggtgtcagacttattcactgaacgcacccagtttgaaatgatg
tatctaacactgacagaactacggagagtgcacccttcagaagatgaaatcctcattcag
tacctagtgcctgccacttgtaaggcagctgctgtccttggtatggacaaaactgtagca
gaaccagtcagccgcctactggagagcacactcaggagcagccacctccccagccagatc
ggagccctgcatggcatcctctacgtgttggagtgtgacctcttggatgacactgcaaag
cagcttattccagttgttagtgactatctgctgtccaacctcaaaggaatagcccactgt
gtgaacgttcatagccagcagcatgtgctggtgatgtgcgccactgcattctatctgatg
gaaaactaccctctggatgtggggccagaattttcagcatctgtgatacagatgtgtgga
gtgatgctgtctggaagtgaggagtccaccccctccatcatttaccactgtgccctccgg
ggtctggagcgtctcctgctgtctgagcagctctctcggttagatacagagtctctggtc
aagctaagcgtggacagagtgaatgtacaaagcccacaccgggccatggcggccctaggc
ctgatgctcacctgcatgtacacaggaaaagaaaaagccagtccaggcagaacctctgac
cccagtcctgctacacctgacagtgagtctgtgatcgttgctatggagcgggtatctgtt
ctctttgataggatccgcaaggggtttccctgtgaagccagggttgtggcaaggatcctg
cctcagttcctagatgacttcttcccacctcaagacgtcatgaacaaagtcattggagag
tttctatccaaccagcagccatacccacagttgatggccactgtagtatacaaggttttt
cagactctgcacactgctgggcagtcatccatggtcagagactgggtcatgctgtccctg
tccaacttcacacaaagaactccagttgccatggccatgtggagcctctcctgcttcctt
gtcagtgcatctaccagcccgtgggtttcagcgctccttccacatgtcatcagcaggatg
ggcaaactggagcccatagatgtgaaccttttctgcctggttgccacagacttctacaga
caccagatagaggaggaattcgaccgcagggctttccagtctgtgtttgaggtggtggca
gcaccaggaagtccgtaccaccggctgcttgcttgtttgcgaaatgtccacaaggtcacc
acctgctga
DBGET
integrated database retrieval system
