Phodopus roborovskii (desert hamster): 127233891
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Entry
127233891 CDS
T08852
Symbol
Pkd1l1
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
prob03037
]
127233891 (Pkd1l1)
04040 Ion channels [BR:
prob04040
]
127233891 (Pkd1l1)
Cilium and associated proteins [BR:
prob03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127233891 (Pkd1l1)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127233891 (Pkd1l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
PKD_channel
GPS
Motif
Other DBs
NCBI-GeneID:
127233891
NCBI-ProteinID:
XP_051056522
LinkDB
All DBs
Position
Unknown
AA seq
2599 aa
AA seq
DB search
MGAGCLTMGWKVLVTAWALFSTPAISSTNESEGGGLCTECGIQDQLAQHMAEAKAEDIFE
DQKRVLQAFDTVVWFAGSKAIFLFTPPFLAFDNHTVPDGSVTETQTWVRGSTVWPRFVAG
LETAGVFDFVAAVSEPSAVECQLGVPSAAALCSLKKDVLFCEGLLSSVENLSKMLLHPFG
SIPVTQAENAGHFAVCHFPETDAPAPAALGIRVHLASGTALCVLLDFGDGCGAEMSLCTV
TGAAAATGYHRYRKGKGLFGFTYTFIFLFITEGIYKLRAVVHGVHGADVELGPYYVDIGH
EKVSVFMNSSSIHDGEALAFADSLPQQKGTVVMHCFSSVSSYNVSFISQIQVGSGQAWLG
VTVGYKMQSVSVYTNGTVFAADTNITFVAVTKETIPLEFTWYLGDDPPVRTTSRSIKRRL
SIPQWYQVMVKATSKTGSVVSESHLIRVQKRIRANRLMSTASALVNANVSFECRLNFGTD
VAYRWNFGDGTIELGGSSSSHVYSREGEFTVEVLAFNNISSAVLRKPLFIVREPCQPPPV
KNMGPKQVQIWRSQPLRLGVTFEAAVLCNVSRGLSYTWSFVGAGATAVTLPAAVNTHRQT
IVLPSYTLECGNYTAVAKVQIKGSMVYSNYCVGVEVRARAPVSVISEGTHIFIPRAATTP
IILRGFQSYDPDIPGAALRYHWTCTTTSSLRWPCFEDSTPHQVDTQAPSVSFPAKWLSEC
CDQFLVTLTVSSNGQNSSQALIFLSTSPDPAFRFLHISWVNFRDTRANWNEELSLRAVCE
DCGNVPDLTYSWDLFLVNATEKNTLEGSGEPMEDYGSMSPALGSSGEQTLMMSTPEGSWP
PSGSSPAFDDFEAYYNDIQEDVPSLGRQPGTSTNFQESGPSMDAEESASDGDNLLGPFLH
TGRAKPDFMIDWPKTLVSQAIFHDYTSSGIMGPALTIKPFSLSSGEMYVLQASVASKHAL
VGKAQLYITVNQVPQDMSCQVQPHSGLEAHTIFSVFCMSGKPDFHYEFRYYIGNTSHTLY
RGRDTQYYFFLPAGETSDNYKVIVSTEITDGQGSKVQPCTVEVTVLPRYHGNACPDKDLY
NYTLETLSSLQLVGSYTEVMNYIAMTTAILTRLYVESRNTSTCGLWSQIQDVLISSACKV
PFTDQEAMMDSIHILRDLINFPNKLSLTSAMHILKHAQGLLAQGQLSRKLLVNKKLGVEF
ILLISGVWEAAKEDMRSEDYLQEEGMKIISDMLLTCLSLSHQHQLHISTGQMEFWTIVHH
SFQSSVQNLGFIWVHFPADLVLHSPVQEESHSQCYISQLMAFMSSPYPMGPVPGQVGGVV
SPRLYSCKSRRPILRGRLETPVTVEFGEENHQHKRNPTMFTLRRDEVNLHQFTGLAERPQ
ETLQIHIRFSKPSTRAFPIMLLVRFSKKATPTDFLVKQVYFWEEQTVQVYVPAVPLKGTN
VGYLSLLNADYDRRPPNKYLAGAVNYTVNFQWIQCVLWDKTGWRSEGPCPQPGTSPEKVN
CSYHRLAPFSVLRRKLNATLEVSSISVFRSHPCNLLPGIFSVFFLILYGFLMTKSRCVDC
HKKKKPGCIFLEEDIPPGHQLYAVIIDTGFRSPAQFTAKVFIVLCGENGLSETKELCCPE
MPLFGRNSRHTFILSTPNQLGPLQKIRLWHDSSGPSPNWFISHVMVKDLCSGQCWFFLAQ
CWLAVSLCDGRVQRELFCLRRGLGFWKLFYSKFTEYLEDFHIWLSPYSQPPTSSYLHTQR
LAVSSCLLCVYSCLAALVTVGAHEQNSLDVGPTLESFSLCLLCTFLVCPATQLLSLLFRF
SKVCGPMLLGRLPMWAPSSAFKGLVPRWSRVCLTWSSSVAWAICGSASLACGLGTGFLGY
RFVPEQCVWWLYLLLLCVVCCAFVTQPLMICLAALAFAWKRNHDSQFFIESLHDATKDLD
LERKEYSRAYIPHSRSSCSPDSAEEAERVLATRQRERHLRWAWPPSRAKFRVTMERLRKE
SQMQAALRDISVHSLMLLLLLFITYGRFCPGEYSLNQAIRKEFTRNARHSFGNLSSTDDW
WDWTLSTLLDGLYPEGPAAGTWGAQPGALRGQCHLIGPSVIKQLKVSSGTACTPPRSTSE
LMEDALPTWSHDLDLENQNVTPGGEACGVKRESAVHTLGRTRHEAHSALTALRANRWIDH
RTRAVSVHFTLYNPPMRLFTSVTLRAEFLPMGGLVPSSLVESISIFYSDSVSQNLLMLSE
LVFLVLNMTHLCFQLWGMATKGILSYWRKLRHWLELSMIGVALAYYAASAHLTTLAENVN
DQFHKGLHQMFVDLSLMVSWNQMARWLRGSLLFLWLLKGAHLLGFLSTMVSLSTVTCSCL
SRAFAPALLGALLLAAQSYLCRFLLFTSTPSPGASTEAFPGLPLQFLGRSHRDSLHNHLD
PGHQAMACYGGALFLLVATLCFGMLRASLLTVFRKRKSFHRKSFMTLKNVAVYAWHKLLT
LLGLETTTLEETAVPVDHSYYLDEFSSLLDELLEKIDGLSDSLELSILEEQWRRTVESRT
VDSHLVGISGCQATGRGATNIAVMNESERSRGGRHPSVPKMQLTLRGATVFLRKKMIFLP
WLCRVLPELRCHNLCTLYY
NT seq
7800 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaggctgcctgacaatgggctggaaagtgcttgtcacagcctgggccctgttc
tccactccagctatcagctcaaccaatgagagcgagggaggaggcttgtgtactgagtgt
ggtatccaggaccagctagcacagcacatggctgaggcaaaggccgaggacatttttgag
gaccagaaaagagtgctgcaggcctttgacacggtagtgtggtttgctggttccaaggct
atcttcttgttcacacccccttttctggcctttgacaatcacactgtgcctgatgggtct
gtgacagagacacagacatgggtgaggggtagcacagtgtggccacgcttcgtggcaggg
ctggagacagcgggtgtcttcgactttgtggctgcagtctcagaaccttctgctgtggag
tgccagttgggtgtcccttcagcagcggccctctgcagcctgaagaaggacgttctcttc
tgtgaaggactgctgagctctgtggaaaacctctccaagatgctgcttcatccttttggg
tccatcccagtgacacaggctgaaaatgctgggcactttgccgtctgccatttcccagaa
acagatgctccggcacctgcagctctgggaatccgtgttcacctggcttccggaacagct
ctttgtgtgctgttggactttggggatggttgtggagctgagatgagcctgtgtacggtg
acaggtgcagctgcagcgactggctaccaccgatacaggaaaggaaagggtttatttggc
tttacttacactttcatatttctgttcatcactgaaggaatctacaagctcagggctgtt
gtccatggcgttcatggagctgatgtggaactagggccttattacgtggacattggccat
gagaaagtgtctgtattcatgaactccagctctatccacgatggtgaagctcttgccttt
gctgactccctcccacaacagaaaggcacagttgtgatgcattgcttctcatctgtttct
tcatacaatgtgtccttcatttctcagatacaagtgggcagcggccaggcttggcttggc
gtgactgttgggtataagatgcaatctgtgtctgtctacaccaatggaactgtgtttgct
gcagacacaaacatcacatttgtggctgttaccaaggaaaccatacccctggagttcaca
tggtatttgggagatgacccaccagtgaggacaacttccagaagcatcaaaagaaggctg
agcatccctcagtggtaccaagtgatggtcaaggccaccagcaagactggcagtgtggtc
tctgagtcccacctcatcagggtacagaagagaatcagggccaatcggcttatgtccact
gcctcagccctggtaaatgccaatgtgtcctttgagtgcagactcaactttggcactgat
gtagcctatcgttggaactttggagatgggaccattgagctgggtggaagctcctccagc
catgtctacagcagggagggagaatttacagttgaagtccttgccttcaataacatcagc
tctgctgtgctaagaaagccacttttcatcgtgcgtgagccttgccaaccacccccggtg
aagaacatggggcctaagcaggtgcagatatggaggtctcagcccctgagactaggagta
acattcgaagctgcagtcctctgtaacgtgtcccgaggactttcctacacctggagcttt
gtgggtgccggggccactgctgtcaccctccctgctgctgtcaacacccacagacagacc
atcgtgctcccaagctataccctggagtgtgggaactacactgccgtggccaaggtccag
atcaagggaagcatggtgtatagcaactactgtgttggtgtggaggttcgagccagggct
cctgtcagtgtgatctctgaaggcacacacatcttcatccctagggccgccaccaccccc
atcatcctcagagggttccagtcttatgaccctgacatccctggggctgctctcaggtat
cactggacttgcactacaaccagctcgctaaggtggccctgctttgaggactctacccca
caccaagtagacactcaggctccttcagtttctttcccagcaaagtggctcagtgaatgc
tgtgaccagttccttgtgacactgacagtctccagcaatggacagaactcttctcaggcc
ttgatattcctgtccaccagtcctgacccggccttcagattcctccacatctcatgggtc
aactttagagacacccgtgcaaactggaatgaagaattgtctctcagagctgtgtgtgaa
gactgtggcaatgtaccagacctcacttattcctgggatctcttcctagtcaatgcaaca
gaaaagaacacgttggaaggttcaggggaacctatggaggactacggctcaatgagtcca
gcactaggttcctcaggtgaacaaactttgatgatgagcaccccagagggaagctggccg
ccttccggctcctcccctgcctttgacgattttgaagcctattataatgacatccaagaa
gatgtgccatccctaggaagacagccaggaaccagcaccaacttccaggaatcaggacca
agcatggatgccgaggagagtgccagtgatggggacaacctgctaggccctttcctccac
acaggcagagcaaagccagatttcatgatcgactggcccaagaccctggtcagccaagcc
atcttccacgactacacctcctcaggtatcatgggaccagctttgacaataaaaccattc
tcactgagcagtggcgagatgtatgtcttacaggcctctgtagcttcaaagcatgcctta
gtaggcaaagctcagctctacataacggtcaaccaagttccacaggacatgtcttgtcag
gtgcaaccccacagtggtctggaggcacataccatcttcagtgtcttctgcatgtcaggg
aaaccggactttcattacgaatttcgctactacataggaaacacttcacacaccctgtac
cgtggacgagatacccagtactactttttcttgccagctggtgagacctcggacaattac
aaagtcattgtttctactgagatcacagatggccaaggctccaaggtgcagccatgcact
gtggaagtgaccgtgctaccccgttaccatggaaatgcctgcccggacaaggacctatac
aactacaccctggaaaccctgtcttctctccagctggtggggagttacacggaagtcatg
aactacattgccatgaccactgcaatcctgacccgtttgtatgtggagagcagaaacaca
tctacatgtggcctgtggtcacagatacaggatgtattgatttcttcagcatgcaaagta
ccttttacagaccaggaagcaatgatggattctattcatatattgagggacctcataaac
ttccctaataagctgagcttgacgagtgccatgcacatcctcaaacatgcccaggggctc
ctcgctcaaggtcagctctccaggaagctactggtcaacaaaaaactgggagttgaattt
atccttctcatctctggagtctgggaagctgccaaagaagacatgagaagtgaggactat
ctgcaagaagaaggtatgaagatcatctccgacatgttactgacctgtctctccttgagc
caccagcatcagcttcacataagcactgggcagatggagttctggaccattgtccatcac
agcttccagagttctgtccagaacctgggcttcatctgggttcacttccctgctgacctg
gtcttgcacagtccagttcaagaggaatcacacagccagtgctacatcagccagctcatg
gcctttatgagcagtccttatccaatgggaccagttcctggacaggtgggtggtgtggta
agccctcggctttacagctgcaagagcagacgcccaattctcagaggacgactggagaca
cctgtgactgtggagtttggagaggaaaaccaccagcacaagagaaatccaaccatgttc
acgttgagacgggatgaagtaaacctccaccagttcactgggcttgctgaaagaccccag
gaaaccttacagatacacatcagattctctaagcccagtacaagagccttccccatcatg
ctgttagtaaggttctccaagaaagccacgcctactgattttcttgtgaagcaggtgtac
ttctgggaagagcagactgtacaagtttatgtacctgctgttccgttgaaagggaccaat
gtggggtatttgtccctattgaatgctgattatgacagaagacctccaaacaaatatctt
gctggggcagtaaactacaccgtgaatttccagtggatccagtgtgtgctttgggacaag
acaggatggagatccgaaggtccctgtccacagccaggaacttctcctgaaaaagtcaac
tgcagctaccatcgccttgcgcctttctctgtcctgagaagaaagctgaatgccactttg
gaagtgagcagcatttctgtgtttcggagtcacccatgcaacttgcttcccggtattttc
agtgtgtttttcttgatcctttatggatttttgatgactaaaagcagatgtgtagactgt
cacaagaaaaagaaacctggctgtatttttctggaagaagatatcccacctggccaccag
ctgtatgcagtcatcattgacactggcttccggtcaccagcccaatttacggcaaaggtt
ttcattgttttatgtggtgaaaatggactctcagaaaccaaagaactctgctgcccagag
atgcccttgtttggaaggaattccaggcacacctttatactgagcactcctaaccaactg
ggaccactgcagaagatccgcctctggcacgacagtagtggaccttccccaaactggttc
atcagtcacgtaatggtgaaagacctatgttcaggccaatgctggttcttcttggcccag
tgctggctggctgtgagcctatgcgatggccgtgtgcagagagagcttttctgcctgcgg
cgcggtcttggcttctggaagcttttctattccaagttcacggagtacctggaggatttc
cacatctggctctcaccgtacagccagccccccaccagcagctacctacacacacagcgg
cttgccgtgtcctcctgcctcctctgtgtctactcatgcctcgctgccctggtcaccgtg
ggtgctcatgagcagaactccctggatgtgggacccactctggaatccttcagtctctgc
ctcctgtgcaccttcctggtctgcccagccacacaactcttgtcactgctcttcaggttc
agcaaggtgtgtggccccatgctcctggggagactcccgatgtgggctcccagcagtgct
tttaaaggacttgtgccccggtggtcaagagtctgtctgacctggtcaagctctgtggcc
tgggccatttgtgggtcagcgtccctggcctgtggtttggggacaggattcctaggctac
aggtttgtgccagagcagtgtgtgtggtggctgtatctgctgcttctctgtgtggtctgc
tgtgcatttgtcacccagccactcatgatctgcttggcagcgctggcctttgcttggaaa
aggaaccacgacagccagttttttattgagtctttacatgatgcaaccaaggatctagat
ttggaacggaaagaatactccagagcctacattccccattctcgcagctcctgtagtcct
gacagtgctgaggaagccgaaagggttttggctacccgacaacgagaacgccacctgcgc
tgggcttggccaccatccagggccaagttcagagtgaccatggagagactgagaaaagag
agccagatgcaggcagccttgagagacatttcagtgcacagcctcatgctgctgctgctt
ttgtttataacatatgggagattctgtccgggtgaatattctctcaatcaagccatcagg
aaggaattcacaagaaatgccagacactcctttgggaacctgagcagcacagatgactgg
tgggactggactctgagcacattgctggatgggctgtacccagaaggacctgctgctgga
acctggggggctcagcctggagctctcagagggcagtgccatctaataggcccttctgtg
atcaagcagctgaaggtttcttctggtactgcatgtacacctcccaggtcaacctcagag
ctcatggaagatgcactacctacatggagtcatgaccttgatcttgagaaccaaaatgtg
acccctggtggtgaggcctgtggggttaagagggagagtgccgtgcacactctaggaaga
acaaggcatgaagcacactcagccctgactgccctcagggccaacaggtggatcgaccac
agaaccagggccgtatctgtgcacttcactctctacaacccgccaatgagactcttcaca
agtgtgaccctacgtgcagagtttctccccatgggaggtcttgtcccctcatccctggta
gagtcaatcagcatcttctacagtgattcagtctcacagaaccttcttatgctttcagag
ctggtgttcctggtactcaacatgacccacctctgtttccagctctggggaatggccacc
aagggcatcctcagctattggagaaaactgagacactggcttgagctctctatgattggg
gtagccctggcctactatgcagcctctgctcacctcactaccctcgctgagaatgtcaat
gaccagttccacaaaggacttcatcagatgtttgtggacctaagtctgatggtgtcatgg
aatcagatggcaagatggctccggggaagcctcttgttcctctggctgttgaagggtgct
cacctcctcggcttcctaagcaccatggtatccttatccacagtgacgtgttcctgtctc
tccagagccttcgccccagcactcttaggggccctgttgctggctgcccaatcctatttg
tgccggtttctgctcttcacctccacaccatcacctggcgcctctacagaagcatttccc
ggactgccgcttcagtttctgggaagaagccacagggactcactgcacaatcatttggat
cctggccatcaagccatggcttgttacggtggagccctttttctgctggtggcaactcta
tgtttcggaatgctgagggcttccctcctgactgttttccgaaaaaggaagtcttttcac
agaaagtctttcatgacacttaaaaatgttgctgtttatgcatggcataaactcctcacc
cttctggggctggaaacaacaactctggaggagactgcagtgcctgtggaccatagttac
tacctggatgaattttcaagtctattggatgaacttctggagaagattgatggtttgtct
gacagcctagaactttctatcctagaagagcaatggaggaggacagtggagtcaaggaca
gtagatagtcacttagttggcatttcagggtgccaagctactgggagaggggccactaac
attgcagtcatgaatgaaagtgagaggtctcggggaggaaggcacccctctgttcccaag
atgcagttaacactcagaggggccactgtgttcctgcggaagaaaatgatcttcctaccc
tggctctgccgggtgctgccagagctacgatgtcacaatctatgcactctctactactga
DBGET
integrated database retrieval system
