Phodopus roborovskii (desert hamster): 127234093
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Entry
127234093 CDS
T08852
Name
(RefSeq) protocadherin beta-4 isoform X1
KO
K16494
protocadherin beta
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127234093
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127234093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
127234093
NCBI-ProteinID:
XP_051056778
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MERLERIHPNRQVMAFTFMLVLVQVCSEKTTQYSILEETESGSFVAHLAKDLDLRPGDLT
ARSARVVCDDYKQRLVLDPETGDLLLREKLDREELCVSLEPCVLHFQVSLEKPVQFLQGE
LLIQDINDHSPEFPDMEMLLKIPENSQPGTLLPLNLAQDLDVGSNGLQHYTVNSNSHFHV
VTRNNSEGKKYPELVQDRALDREEQAELSLTLTALDGGDPPRSGTAMVRILILDINDNAP
EFVNTPYEVQVLESSPPDSPVLTVLAQDADAGIFGRVSYGLFQASDEIQQTFSINEVTGE
IRLRKGLDFEKVKSYHVKIEATDGGGLSGKGAVLIEVVDVNDNAPELTISSLTSSVPENA
PETIISIFRVGDRDSGENGKVVCSIPETLPFILKSTFKNFYSLVTESPLDRETRAEYNIT
ITVTDLGTPRLTTQHTITVQVSDVNDNAPAFTETSYTLFVQENNSPALHIGNISATDSDS
GSNAHITYSLLPTHDPQLDLSSLISINADNGQLFALRALDYEALQTFEFHVGATDQGSPE
LRSQVLVRVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFNVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPQRSASVTLHV
LVVDGFSQPYLPLPEVAQEPAHDEDALTLYLVIALASVSSIFLLSVLLFVGVRLYRRTRA
ASMGGCTVPERHFPGHLVDVSGAGTLSQSYQYEVCLMGGTGTNEFKFLKPVIPSLQLHET
SSNMQEKENFTDSLGFNIQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctggagagaattcacccaaacaggcaagtcatggcttttacctttatgctg
gttttggttcaggtttgcagtgagaaaacaactcaatattctatcttggaggaaacagaa
agtggttcctttgtagcccatctggccaaggacctggacctgagacctggggacctgaca
gcccggtctgcacgggtggtgtgtgatgactacaagcagagattggtgctggatcctgag
acaggagatctgctcctgagggagaaactagaccgggaagagttgtgtgtttctttggag
ccctgtgtgctacatttccaggtatctctggaaaagccagtgcaatttcttcaaggagaa
ttgctgatccaggacatcaatgaccactcaccagaattcccagatatggaaatgctcttg
aaaataccagaaaacagccagccaggaactcttttaccactgaatttagctcaggatttg
gatgtgggaagcaatgggcttcaacattacacggtcaactccaattctcattttcatgtt
gtcactcgaaataacagtgaaggcaagaaatacccagaattggtacaggacagagccctg
gacagagaggagcaggcagagctgagcttgaccctcacagctctggatggcggtgatcca
cctaggtcaggaacagccatggttcgaatcctgatcctggacatcaatgacaatgcccct
gaatttgtgaacaccccctatgaggtgcaggtcctggagagcagtcccccagactcccca
gtcctgactgtcctggcccaggatgcagatgctggcatctttggaagagtttcctatggc
ttgttccaagcctcagacgaaattcaacaaactttctcaataaacgaagtcacgggagaa
atacgactgagaaagggattggattttgaaaaagttaaatcttaccatgtgaaaatcgag
gccacggatggaggggggctttctgggaagggcgctgtgctgatagaggtggtggatgtg
aacgacaatgccccagagctgaccatatcttcactgaccagctcagtcccagaaaatgct
cctgagaccataatcagcatcttcagagttggagacagggattctggagagaacggaaag
gtggtttgttctattccagaaaccctgccattcatcctaaaatccactttcaagaatttc
tacagcctggtgacagagagtccactggacagagagaccagagctgagtacaatatcacc
atcacagtcactgacctgggcacacccagactcacaacccagcacaccataacagtgcag
gtgtccgatgtcaacgacaacgcccctgccttcactgaaacctcctacaccctgtttgtc
caggagaacaacagccctgccctgcacataggcaacatcagcgccacagattcagactca
ggctccaatgcccatatcacctactcgctgctgcccacccatgacccgcagctggacctc
tcctctctcatctccatcaatgcagacaatgggcagctgttcgcgctcagggcgctggac
tatgaggctcttcagaccttcgagttccacgtgggcgccacagaccaaggctcaccagag
ctcaggagccaggtgcttgtgcgtgtgctcgtgctggatgccaatgacaatgcgcccttt
gtgctctaccctctgcagaatgcctctgcgccctgcactgagctgctgcccagggcggca
gagccaggctacctggtcaccaaggtggtggcagtggaccgcgactctggccagaatgcc
tggctgtctttccagctgctcaaggccacggagccagggctgttcaatgtgtgggctcac
aatggcgaggtgcgcacctccaggctcctgagtgagcgcgatgctcccaagcacaggctg
ctgctgctggtcaaggacaatggcgatcctcagaggtctgccagtgtcactctgcatgtg
ctggtggtggatggcttctctcagccctacctgcctctgccggaggtggcacaggaaccc
gcacacgacgaagatgcactcacgctgtatctggtcattgccttggcttctgtatcttct
atcttcctcttgtctgtgctgttgttcgtgggtgtgaggctgtacaggaggaccagggcg
gcctctatgggtggttgcacagtgcctgagcgacactttcctggccacctagtggatgtc
agtggggcaggaaccctgtcccagagctaccagtatgaggtgtgtctgatgggaggtact
gggacaaatgaattcaaattcctgaagccggtcatccccagtcttcaacttcacgaaacc
agttctaatatgcaagaaaaggaaaactttacggatagtcttggatttaatatacaatga
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