Phodopus roborovskii (desert hamster): 127234101
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Entry
127234101 CDS
T08852
Name
(RefSeq) protocadherin beta-4
KO
K16494
protocadherin beta
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127234101
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127234101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Cadherin_4
REJ
Motif
Other DBs
NCBI-GeneID:
127234101
NCBI-ProteinID:
XP_051056789
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MEKLERNHPNRQVIPFLFVLLWDQVLTVPTRYSVLEETESGSFVAHLSKDLGLRPGDLTA
RSARVVSDYDKQQLILDPETGDLLLREKLDREELCASVEPCVLHFQVFLEKPVQFLQGEL
LIQDINDHSPEFPDTEMLLKIPENSQPGSRFPLKLAQDLDVGSNGLQHYMVNSNSHFHVI
TRNDSEGKKYPELVQDRALDREEQAELSLTLTALDGGDPPRSGTAMVRILILDINDNAPE
FVNTPYEVQVLESSPPDSPVLTVLAQDADAGIFGRVSYGLFQASDEIQQTFSINEVTGEI
RLRKGLDFEKVKSYHVEIEATDGGGLSGKGAVLIEVVDVNDNAPELTISSLTSSVPENAP
ETVVAIFRIRDRDYGENGKIDCSIPDTLPFVLKPSNKNFYTLVTEGPLDRETRAEYNITI
TVTDLGTPRLTTQHTITMQVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSG
SNAHITYSLLPTHDPQLALSSLISINADNGQLFALRALDYETLQTFEFRVEATDQGSPAL
SSQALVRVLVLDANDNAPFVLYPLQNASVPCTELLPRVAEPGYLVTKVVAVDRDSGQNAW
LSFQLLKATEPGLFTLWAHNGEVRTARLLSERDAPKHRLLLLVKDNGDPQRSASVTLHVL
LVDGFSQPYLSLPEVSHEPAQDEDSLTLYLVIALASVSSIFLLSVLLFVGVRMCRRVRAA
SLGGCSLPEGHFPGHLMDVSGEGTLSQNYQYEVCLTGDSGTGEFKFLKPNLLLQNAGRDF
KESPHCRDSFVFH
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactggagagaaatcatccaaacaggcaagtgattcctttcctttttgtgctg
ctttgggatcaggttctaacggtgcctactcggtactctgtcctggaagaaacagaaagt
ggctcctttgtagcccatctgtccaaggacctgggcctgagacctggggacctgacagcc
cggtctgctcgagtggtgtctgattatgataaacagcagttgattctggatcctgagaca
ggagatctgcttctgagggagaaactagaccgggaagagttgtgtgcttctgtggagccc
tgtgtgctacatttccaggtgttcctagaaaagccagtgcaatttcttcaaggagaattg
ctgatccaggacatcaatgaccactcaccagaattcccagatacggaaatgctcttgaaa
ataccagaaaacagccagccaggctcacggtttccactgaaattagctcaagacttggat
gtgggaagcaatgggcttcaacattacatggtcaactccaattctcattttcatgtcatc
actcgaaatgacagtgaaggcaagaaatacccggaattggtgcaggacagagccctggac
agagaggagcaggcagagctgagcttgaccctcacagctctggatggcggtgatccacct
aggtcaggaacagccatggttcgaatcctgatcctggacatcaatgacaatgcccctgaa
tttgtgaacaccccctatgaggtgcaggtcctggagagcagtcccccagactccccagtc
ctgactgtcctggcccaggatgcagatgctggcatctttggaagagtttcctatggtttg
ttccaagcctcagacgaaattcaacaaactttctcaataaacgaagtcacgggagaaata
cgactgagaaagggattggattttgaaaaagttaaatcttaccatgtggagatcgaggcc
acagacggaggggggctttctgggaagggcgctgtgctgatagaggtggtggatgtgaac
gacaatgccccagagctgaccatatcttcactgaccagctcagtcccagaaaacgctcca
gaaactgtggttgccatcttccgaatacgagacagagattatggagagaacggaaaaatc
gattgttctattccagatactttaccattcgttttaaaaccctctaacaagaacttttac
actttggtgacagagggccctctggatagagagaccagagctgaatacaacatcaccatc
acagtcactgacctgggcacaccaagactcacaacccagcacaccataacaatgcaggtg
tccgatgtcaacgataacgcccccgccttcacacaaacctcctacaccctgtttgtccag
gagaacaacagccccgccctgcacataggcaccattagtgccacagactcagactcaggc
tccaatgcccacatcacctactcgctgctgcccacccacgacccgcagctggccctctcc
tctctcatctccatcaatgcagacaatgggcagctgtttgcgctcagggcgctggactat
gagaccctgcagaccttcgagttccgcgtggaagccacagaccaaggctcaccagcactc
agcagccaggcactggtgcgcgtgcttgtgctggatgccaatgataatgcgcccttcgtg
ctctaccctctgcagaatgcctccgtgccctgcaccgagctgctgcccagagtggcggag
cctggctacctggtcaccaaggtggtggcagtggatcgcgattctggccagaatgcctgg
ctgtctttccagctgctcaaggccacggagccagggctattcaccctgtgggctcacaat
ggtgaggtgcgcactgccaggctgctgagtgagcgcgatgctcccaagcataggctgctg
ctcctggtcaaggacaatggggatcctcagaggtctgccagtgtcactctgcatgtgctg
ctggtggatggcttctcccagccctacctttctctacccgaggtgtcacacgaaccagca
caagatgaggactcactcactctgtacctggtcattgccctggcatctgtgtcttcgatc
ttccttttgtctgtgctgctgttcgtgggggtgaggatgtgcaggagggtcagggcggcc
tctctgggtggctgctctcttcctgagggacactttcctggtcacctgatggatgtcagc
ggcgaggggaccctgtcccagaactaccagtatgaggtctgtctgacaggggactctggg
actggtgagttcaagttcctcaaacctaatttgttgcttcagaatgctgggagagacttc
aaggaaagtccccactgcagggatagctttgtattccactaa
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