Phodopus roborovskii (desert hamster): 127234102
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Entry
127234102 CDS
T08852
Name
(RefSeq) protocadherin beta-18
KO
K16494
protocadherin beta
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127234102
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127234102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
FctA
Motif
Other DBs
NCBI-GeneID:
127234102
NCBI-ProteinID:
XP_051056790
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MMEPGVMAAQHIRQVLLFFAFLGGSSVLSETWSYSVAEEMETGSSIANIIKDMGVGDLAE
RGARVIFDDYQPYLRLELETGNLVLNKKLDREELCGTSEPCILHFQVLLENPFQFLQGEL
LVEDINDHPPTFLEKLIFLNISEGATPGTSFQMDNAQDLDVGMNGVQNYTISPTTYFYLK
LKDGGKGRKYPELVLDEPLDREKEPSVSLILTAMDGGSLPRTATAPIQVVVVDVNDNAPE
FERMLYEIQVPENSPMDSLVIKVSATDLDMGMNGEISYSFSHVSRDVRKTFKIHPISGEV
HLKSFLNFEVTQSYTINVQAVDGGGLSGKSVIIVQVIDVNDNRPEIVFTSLMSPIPENSS
SEMVVAVFRVRDQDAGDNGRMLCSIQDNLPFLLKPTFKNFYTLVTENPLDRESKAEYNIT
ITVTDTGTPKLSTQHTLTVQVSDVNDNAPTFTQTSYTLFVQENNSPALHIGAISATDSDS
GSNAHITYSLLPTHDPQLALPLLISINADNGQLFALRALDYEALQTFEFRVGVTDQGSPT
LNSQALVRVQVLDTNDNAPFVLYPLQNASAPCTEMLPRAAESGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDAPKHRLLLMVKDNGDPPRSVSVTLHV
LLVDGFSQPYLPLPEVAHEPAQDEDVVALYLVIALTSVSSLFLLSVLLFVGARMCKRARE
AMGGCSVPEGHFPGHLMDFSGTGTLSQSYQYEVCLTGVSDTKDFWFLKSVSPNNEVMPCV
EENSTSVNDFGYD
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccaggagtgatggctgctcagcatataaggcaagttctgctcttttttgct
ttcctgggagggtcctcggttctttccgagacctggagctattctgtggcagaagaaatg
gagactggctcctctatagccaatataattaaagacatgggtgtgggtgacctggctgaa
cggggtgctagagttatatttgacgactatcagccttatttgcggttagaacttgagact
ggcaacttggtcttgaacaaaaaattggacagggaggaactttgtggcaccagtgaaccc
tgtatattgcatttccaggtgttgctggaaaatccttttcaatttcttcagggtgagctt
ttggttgaagacataaatgaccatcctcccacattcctggagaaactcatatttctaaat
atctcagaaggtgctactccagggacctcattccaaatggataatgctcaggacttagat
gtaggaatgaatggggtccaaaactatacaataagccccacaacctatttctaccttaag
ttaaaagacggaggtaaaggaagaaaatacccagagttggtactggatgaacctctggac
agagaaaaggagccttcagttagcttgatactaacagccatggatggtgggtccctgcca
aggacagcaactgcaccgattcaagttgtggttgtggatgtgaatgacaatgccccagag
tttgaaagaatgctgtatgagattcaagtaccagagaatagccctatggactcactagta
atcaaggtgtctgctacagatttggacatggggatgaatggagaaatatcttactcattt
tctcatgtctctagagatgtacggaaaacattcaaaattcatccaatttctggtgaagtc
catttgaaatcattcctaaattttgaggtaactcagtcttatacaataaatgttcaagct
gttgatggtggaggtctctctggaaaatcagtcattattgttcaagttatagacgtgaat
gacaaccgaccagaaatagtctttacgtctcttatgagtccgatcccagaaaacagctca
tcagaaatggtggtcgctgttttcagagtacgagaccaagacgcaggagacaatggcaga
atgctgtgctcaattcaagacaaccttccttttctcttgaaacctactttcaaaaatttc
tacactctagtaacagagaatccactggacagagagagcaaagctgaatacaacatcacc
atcacagtcaccgacactggcacacccaagctctcaacccagcacaccttaactgtgcag
gtatctgatgtcaatgacaacgcccccaccttcacacaaacctcctacaccctgtttgtc
caggagaacaacagccccgccctgcacataggcgccatcagtgccacagattcagactca
ggctccaacgcccacatcacctactccctactgcccacccacgacccacagctggccctc
ccattgcttatctccatcaatgcagacaacgggcagctgttcgcgctcagggcactagac
tatgaggccctgcagaccttcgagttccgcgtgggtgtcacagaccaaggctcgcccaca
ctcaacagtcaggcactagtgcgtgttcaggtgctggacaccaacgacaatgcgcccttc
gtgctctaccctctgcagaatgcatctgcaccttgcactgagatgctgcccagggcagca
gagtcaggctacctggtcaccaaggtggtggctgttgaccgtgactcaggccagaatgcc
tggctgtccttccagctgctcaaggccacggagccaggactgttcagtgtgtgggctcac
aatggcgaggtgcgcacttccaggctcctgagtgagcgtgatgctcccaaacacaggctg
ttgctgatggtcaaggacaatggtgatcctccaaggtctgtcagtgtcactctgcatgta
ctgctggtggatggcttctctcagccttacctgcctctgcccgaggtagcacacgaacct
gcacaagatgaggatgtggtcgctctgtacctggtcattgccttgacgtctgtgtcttcc
ctcttcctcttgtctgtgctgctatttgtgggggcgaggatgtgcaagagagccagggag
gctatgggtggctgctctgttcctgagggacactttcctggccaccttatggacttcagc
ggcacgggtaccctgtctcagagctaccagtatgaggtgtgtctgactggagtatcagat
accaaagatttttggttcctaaagtctgtatctcccaacaatgaggttatgccttgcgtg
gaggagaattccacctctgtgaatgattttggatatgattaa
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