Phodopus roborovskii (desert hamster): 127234103
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Entry
127234103 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127234103
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127234103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
DUF5527
SMIM43
Motif
Other DBs
NCBI-GeneID:
127234103
NCBI-ProteinID:
XP_051056791
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MAARGSRFSRQRQVLFLFLFGGLCSAGSMFGPYSVTEETERGSFVANLAEDLGLEVETLA
AKRTRVASDDNKQHLLLDFHTGNLLTNEKLDREKLCGSTEPCILYFQILMDNPFQIYRAE
LRIVDINDHSPSFQDKEMILKILENTAVGTAFRLERALDSDGGRNGIQNYTISPNSVFHI
AIHGNDEGMIYPELVLDKPLDWEEEQEFSLTLTAFDGGTPPRSGTATIQILVMDINDNAP
QFSQELYQTQAPENSPIGLPIVKVSAEDVDSGVNAEVSYSFFDASEDIRETFQINPFSGE
IVLKAVLDYEMVKSYKLNIQAADGGGLSARCTVLVHVLDINDNPPELTISSLVNEVVENS
PETVLAVFRINDRDSGENGKTVCYIQENLPFDLRRSVDNFYILMTEGALDRESRAKYNIT
ITVTDLGTPRLTTQHTITVQVSDVNDNAPNFTQTSYTLFVQENNSPALHIGTISATDSDS
GSNAHITYSLLPTHDPQLALSSLISINADNGQLFALRALDYETLQTFEFHVRATDQGLPA
LSSQVLVQVLVLDSNDNEPFVLYPQQNASAPCTELLPRAAETGYLVTKVVAVDRDSGQNA
WLSFQLLKATEPGLFTVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPQRSASVTLHV
LVVDGFSQPYLPLPEVASDSAQDEDELTLYLVIALACVSLLFLLSVLLFVGVRLCKRVRA
KALRDCSVAEGHFSSHLVDVSGMGTLSQSYQYEVCLMGGSGDTSDFKFMKPIYPGVHSHG
SQINADEKPTF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcagctagagggtcacgcttctcccgacaaaggcaagtgctatttctgtttctgttc
gggggtctgtgttcggcaggttctatgtttggaccttattcagtaactgaggaaacagaa
aggggatcatttgtggcgaatctggcagaggatctggggctagaggtggaaaccctggct
gcaaagagaactagggtggcatctgatgacaacaagcagcatttgctcctggattttcac
actggaaatttgctcacaaatgagaaactggatcgagagaagctgtgtggctccacagag
ccctgcatactgtatttccaaattttaatggataacccctttcagatttaccgggctgag
ctgagaatcgtggatataaatgaccactcaccctcattccaggacaaagagatgatttta
aaaatactagaaaacacagctgtaggaacagcatttcgcttagagagagcactagactca
gatggaggacgtaatggcatccaaaactataccatcagccccaattctgtttttcatatt
gcaattcatggcaatgatgaagggatgatatatccagagcttgtgctagataagcctcta
gattgggaggaggagcaggagttcagtttaacactcacagcatttgatggagggactcca
cccaggtccggaacagccactatacaaattctggtcatggacatcaatgataatgcccca
cagttttcccaggaactttatcaaacccaggctccagaaaatagcccaataggacttcct
attgttaaagtctctgcagaagatgttgattcaggagtcaatgcagaagtatcctattca
ttttttgatgcctccgaagatattcgagaaacctttcaaatcaaccctttctctggggaa
atcgtgctcaaagccgtgcttgattatgagatggtgaagtcctataagttaaatatacag
gcagctgatggtgggggcctttctgctagatgtacggttttagttcatgttttagacatt
aatgacaaccctcctgaactgaccatatcatcacttgtcaatgaagttgttgaaaactcc
cccgaaactgtgctggcagtttttaggattaacgacagagactctggagaaaatggaaag
accgtttgctatattcaagaaaatctgcccttcgatctaagacggtctgtagataatttt
tacatcctgatgacagaaggagctctggacagagagagcagagctaagtacaacatcacc
atcacagttaccgacctgggcacacccagactcacaacacagcacaccataacagtgcag
gtctcagacgtcaacgacaacgcccccaacttcacacaaacctcctacaccctgtttgtc
caggagaacaacagccccgccctgcacataggcaccatcagcgccacagattcggactca
ggctccaatgcccacatcacctactcgctgctgcccacccatgacccgcagctggccctc
tcctcgctcatctccatcaatgcagacaatgggcagctgttcgcgctcagggcgctggac
tatgagaccttgcagaccttcgagttccacgtgcgcgccacagaccaaggcttgccagcg
ctcagcagccaggtgctggtgcaagtgttggttttggactccaacgacaatgaacccttt
gtgctctaccctcagcagaacgcctctgcaccctgcacggagctgctgcccagggcggca
gagacaggctacctggtcaccaaggtggtggctgtggaccgtgactctggccagaatgca
tggttgtcattccagctgctcaaggctacggagcctgggctattcaccgtgtgggctcac
aatggcgaggtgcgcacctccagactcctgagtgagcgcgatgctcccaagcacaggctg
ctgctgctggtcaaagacaatggcgatcctcagaggtctgccagtgtcactctgcatgtg
ctggtggtggatggcttctctcagccctacctgcctctgcccgaggtagcgagtgactct
gcccaggatgaggatgagctcactctgtacctggtcattgccttggcgtgtgtctcttta
ctattcctcttgtctgtgttactgtttgtcggggtgaggctgtgcaagagggtcagggcg
aaagcgctgagggactgctctgtcgctgaaggacacttttctagccacctggtggatgtc
agcggcatgggcaccctgtcccaaagctaccaatatgaggtgtgtctgatgggaggctca
ggtgataccagtgatttcaagttcatgaaaccaatttaccctggtgttcattctcatggt
tcccagatcaatgctgatgaaaagcccacattttga
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