Phodopus roborovskii (desert hamster): 127234164
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Entry
127234164 CDS
T08852
Symbol
Dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127234164 (Dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127234164 (Dmxl1)
Membrane trafficking [BR:
prob04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127234164 (Dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
127234164 (Dmxl1)
RAVE complex
127234164 (Dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
MIOS_WD40
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
127234164
NCBI-ProteinID:
XP_051056923
LinkDB
All DBs
Position
Unknown
AA seq
3069 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGEQRFTAYASGCDIVILGSNFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVVSVFEPVSLRKKRKNLELYSQWQKSGQFFLDSIALNITWDP
TGNRLLTGSSCLQLWCNNNSSKQTEDENPDRTDLNFGDWVCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRPAVTSPDKNSEKQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYEGDYNHWCEPINLTNNFKRNA
SSKERVQSALEVNLRPFRKGRRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKCGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEASVEDSIQPDIKSDEEMDDVVDDLKINHEKKELGEDKMLPNSNFTPLSSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKPTGLTRSTSMLISSGHSKSSNNLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPNVGNQKQAHDIINTEECSLTQQDKNNVDMAFQDPNAIYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPEISKYVGEVFNIVSQQSTARPGCIIALDPITKLHGRKTQLLHVFQEDFILN
NLEKKSLGKNNILLDPGNSPHGFSEKFYLVVIECTQNNRSLIQMWNLHLRSIPVSLDERA
DTKLSEADWLPEEHYSSSPEKILSPFSQRFQACRANLQSTSRLSLFSEMVYSKEMDLPEG
VEIISVKPSAGHLSSSSIYPACSAPYLLATSCSDDKVRFWRCRVTDGESATSKNGKIDLV
YIWEEWPLLIEDGLQSNSSITVPGRPVEVSCAHTNRLAVAYKQSASNSKSQEFVMHVSIF
ECESTGGSCWVLEQTIHLDELSMVLDSGISIDSNLVAYNKQETYLFSKESITSNTKHLVH
LDWMSREDGSHILTVGIGSKLFMYGPLAGKVQDQTGKENLAFPLWESTKIIPLSKFVLLR
SVDLVSSVEGAPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSYKQEPVTTDSYNGSTPS
ILNLLKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKKTMFDPTVDMEDSGLFEAAHVLSP
TLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNETESNHERRLRSLTISASG
STTRDPQAFNKTENTDYTEIDSVPPLPLYALLAADDDSYCSSSEKFSNESTSSKKKQVSK
ESYDELFQTSVLMSDSHMLETDEENTKPTVIDLSQYSPTYFGPEHAQVLSGHLLHSSLPG
LTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLSAY
RAQLLHQGLSTGHFAWAFHSVAEEELLNMLPVMQKDDPTWSELRAMGVGWWVRNSRILRK
CIEKVAKAAFLRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGHNFEEERWRKA
ALKNAFSLLGKQRFEHSAAFFLLGGCLKDAIEVCLEKLNDIQLALVIARLFESEFDKSAT
YKSILRKKVLGIGSSINELSSSNISVHRDPFLRSIAHWILEDYSAALETLIRQPFTEDED
QVMMSACNPIVFNFYNYLRTHPLLLRRHFGSSDTFSTHMALTGKSGLAGTINLSERRLYF
TTASAHLKSGCPMLALEVLSKMPKVVKKTKHFCRASSFFTSKESSSPLHSGEREDKSSAV
DWSQSVLNGFESSSEGSSERQSNSTFSFDWSQPSMVFQDDSLELKWDSDNDEENEDPPIS
MKEIKPLARKTDKKLDELSSYTDSLSTLDESDILNPSEDIIAVQLKFRACLKILTVELRT
LSTGYEIDGGKLRYQLYHWLEKEVVALQRTCDFCSDEEQLQTTLSQDTGESGLSEDIDGL
HHQTKVKQRKESFQEKRQWLLKYQSLLRMFLSYCVLHGSHGGGLASVRMELILLLQESQQ
ETAEPVFPNPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPHPDS
QSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLAHRHSLRTGSLDE
SVTPNTSPAQWPGISCLIQLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATHCSNEL
FRIVAHPLNENMWSAVFGGGVQMHSKASSGRHYAMPSPHQVVVFSMECVGFSKALSAISS
HSPPTLAVEGEKQNKHFSPSKVSCRESSPIASSSVNQESLTVKEKFIPPELSIWDYFIAK
PFLPPSQSRAEYDSEESLESDDEDEEDDDTFPSDHHLQEHSNSNSFSWSLMRLAMVQLVL
SNLKTFYSFAGHDLSELPVSSPLCHAVLKTLQCWEQVLLRRLEIHGGPPQNYISSHTSEE
NVSAGPAILRHKALLEPTNTPFKSRNHLALSVKRLWQYLVKQEEIQETFIRNIFTKKRCL
NESLEDNNETIKNSMMEEPNINKIEADLGYPGGKARIIHKESDIITAFAVNKANRNCIAV
ASSHDVQELDVSGILATQIYTWVDDDAETESKGSEDFLVIHAHDDLTAVQGSTPYTHSNP
GTPINMPWLGSTQTGRGASVMTKKAINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQ
ITCFRTGGNSRITRMRFNYQGNKFGIVDADGYLSLYQTNWKCCPVTGSMPKPYLAWQCHN
KTANDFVFVSSSSLIATAGLSTDNRNICLWDTLVAPTNSLVHAFTCHDSGATVLAYAPKH
QLLISGGRKGFTCVFDLRQRQQRQFFQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLS
SFSLLHTFINEHARQSIFRNIGTGVMQIETGPANHIFSCGADGTMKMRILPDQFSPLNEV
LKNDVKLML
NT seq
9210 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggcgccgtgaaccccggcgaccactgcttctcggtg
ggcagcgtcggcgagcagcgcttcacggcctatgcatctggatgtgacattgtaatactg
ggaagtaattttgaaagattacagatcatcccaggcgctaagcatggaaatattcaagtg
ggatgtgtagactgttcaatgcaacaaggcaagattgcagcatcctatggaaatgttgtc
tctgtttttgaaccagtcagtcttcggaaaaaaaggaagaatttggaactttatagtcag
tggcagaaaagtggtcaattttttctggactcaatagcacttaatataacttgggatccc
acaggtaaccgtcttttaactggttccagctgtctgcagctctggtgtaacaataactca
agcaagcaaactgaagatgaaaatccagatagaacagatcttaactttggagattgggtg
tgcatttggcattgcaaaaccgcttcccaagtccatttaatgaaattttcaccagatgga
gagttttttgccactgctggaaaggatgactgtcttctaaaggtatggtataatgtagaa
aactggcgaccagctgttacctctccagataaaaattcagaaaaacaatcccaaggagaa
attgacttttcttttgtgtatctggcccatccacgagctgtaaatggattttcctggcgt
aaaacaagcaaatatatgccgagggcttctgtatgtaatgtactgttgacttgctgtaag
gataatgtatgtcgtctttgggtagaaacatttttaccaaatgactgcttgttatatgaa
ggcgactataaccattggtgtgaaccaatcaatttaacaaataacttcaagagaaatgct
tccagtaaagaacgagttcaaagtgctctagaagtaaatctgagacctttccgtaaaggt
cgaaggagatcacttgctcttgtagcacatactggctatctgcctcatcagcaggatcct
caccatgtccacaggaacacaccactgcatgccaatgcactttgtcactttcatattgca
gccagcatcaacccagccacagacatcccacttcttccatctattacatctttaagttta
agtgaaaatgaagagaagtgtggaccttttgtggtacactggttaaacaataaagagctg
cattttacattgtccatggaagtcttcttacagcaacttagaaaaagttttgaacaaccc
tcatctgaggccagtgtagaagactctattcagccagatataaaatctgatgaagaaatg
gatgatgttgttgatgacttaaaaataaatcatgagaagaaggaattgggtgaagataaa
atgttaccaaactcaaattttacaccgttatcgtcagctgccattgaccatcagattgaa
gtgcttctgtctgaatggagtaaaaatgcagacatgcttttcagtattcatcccatggat
ggttctttactagtttggcatgtagattggctggatgaataccagcctggtatgtttcgt
caagtacaggtgtcctttgtttccagaattcctgtagctttccccacaggcgatgcaaac
tctctctgtaaaagcatagttatgtatgcctgtaccaagaatgttgacttggctattcaa
caaggaaaacaaaaacctactggcctcactcgctctacatcaatgcttatttcctctggt
cacagtaaatcatcgaacaatttaaaattaagtattttcactcctaatgttatgatgatt
tcaaagcatgctgatggttctttgaatcagtggctggttagttttgctgaggaatctgct
ttttctacagttcttagtatttctcacaaatccagatattgtggtcatcgatttcatctt
aatgatttagcttgtcactcagtattaccattgttactgacaacttcacaccataatgca
ttaaggacaccaaatgtgggtaaccaaaagcaagctcatgacattataaatacagaagaa
tgttccttgacacagcaagataaaaataatgttgatatggcttttcaagatcccaatgcg
atttatagtgaacttattctttggagggttgatccagttgggccattatctttttctgga
ggagtatctgagctggcccggattaactctcttcatgtttctgccttttccaatgtggca
tggctccctactcttatacccagttactgtctaggtgcatactgcaactctcctagtgca
tgctttgtagctagtgatggacaatatctgaggttatatgaagctgttattgatgccaag
aaacttttatatgagctttccaaccctgaaatttctaaatatgttggtgaagtgtttaac
atcgtcagtcagcaatcaacagccaggcctggttgcattattgcattagatcccattacc
aagcttcatggcagaaaaacccagttgcttcatgtttttcaagaagatttcattttgaat
aaccttgagaagaaaagtctgggaaaaaataacattttattggatccaggcaattcacct
catggattttctgaaaagttctacctggttgtgatagagtgcactcagaacaaccgttca
ctgatacagatgtggaatttacacttaaggtccattcctgtctcactggatgaaagagca
gacacaaaactatcagaagctgattggctaccagaagagcattattcctcttctccagag
aagatcctatctccattttcacagagattccaggcttgcagagcaaatcttcagagcacc
agcaggctgtcgctattctctgaaatggtgtacagcaaagagatggatcttccagaagga
gtggaaataattagtgtgaagccttcagcaggacacctgagttcatcttccatatatcct
gcatgcagtgccccttatttattggcaacttcatgctcagatgataaagtaagattttgg
cgatgcagagtaacagatggagaatcggctacatcaaagaatggaaaaatagatcttgtg
tacatttgggaagaatggccattactcattgaagatggacttcagagcaatagtagtata
actgtacctggtaggcctgtagaagtgagctgtgcacatactaatcgtttagcagtagct
tataagcagtctgcatctaatagtaaatctcaggaatttgtgatgcatgtaagtattttt
gaatgtgaatctacaggaggttcatgttgggtccttgaacaaacaattcatttagatgag
ctaagtatggtgttggattctggcattagcattgatagcaatttagtggcctataataaa
caagagacatatttattcagtaaagaaagtattacatcaaacacaaaacatttggttcac
ttagattggatgtctagagaagatggttctcatatcttgactgtaggaattggctcaaaa
ctttttatgtatggacccctggctggcaaggtacaagaccaaactggtaaggagaacctg
gcatttcctctctgggaaagcactaaaattatacctctttcgaaatttgtactattacga
agtgtggacttggtttcttctgtagagggtgccccaccttttcctgtttctttatcatgg
gtccgggatggcatccttgtagtaggaatggattgtgaaatgcatgtatattcccagtgg
cagccatcttataaacaagaacctgttacaacagattcatacaatggaagcactccatct
atattaaatttattaaaacaaagtaactcatcaagttctggattacatcctccaaagaaa
actcttactcgatccatgaccagtcttgcacagaaaatctgtggaaaaaaaactatgttt
gaccctacagtggatatggaagattccggtctttttgaagcagctcatgtactttcccca
actttaccccagtaccatcccttgcaacttttggaactcatggatcttggcaaagtccgg
agagccaaggctatcttatcacatcttgtcaaatgcattgctggggaagttgtggctctg
aatgaaactgaatccaatcatgagcgccgccttaggtctctcaccatcagtgctagtgga
agcaccaccagagaccctcaggcattcaacaaaactgaaaacacagattacacagagata
gactctgtccctccacttcctttatatgccttacttgcagcggatgatgatagctattgc
tcatcttcggaaaagtttagtaatgaaagtacctcaagtaaaaaaaaacaagtatcaaaa
gaaagttatgatgagcttttccagacttcagttctgatgtctgatagtcacatgttagaa
acagatgaagaaaatacgaagcccacagttattgacctttcacaatacagtccaacttac
tttggtcctgagcacgcgcaagttctttctggccatttactgcattctagtttaccaggg
cttacccggatggaacaaatgtctttgatggccttagcagacacaattgcaacaacaagc
actgatattggagagagcagggacagaagtcaaggtggagaaactctagatgaatgtgga
ttaaagttccttttggctgtacgactccatacctttcttacaacttccctttcagcctat
cgagctcaactccttcaccaaggcctctctactggtcattttgcatgggcatttcactca
gtagcagaagaagaactgctaaatatgttgccagtcatgcagaaagatgatccaacttgg
tctgaactgagagcaatgggtgtgggctggtgggtgcgcaattctcgcatcttacgcaaa
tgcatagaaaaagtagccaaagcagcctttcttaggaataatgatcctttagatgctgca
attttctaccttgcaatgaaaaaaaaggctgtgatttggggattatatcgatctcaaaaa
gacaccaaaatgacacagttttttggacacaattttgaggaagagaggtggcgtaaagca
gctttgaaaaatgccttttctttattaggcaagcaacggtttgaacattctgcagcattt
tttcttctaggtggttgcctcaaagatgcaattgaggtatgtcttgagaaactgaatgac
attcagttggctcttgtaatagcaagactctttgagtctgaatttgataagtctgcaaca
tacaaatctattttacgcaaaaaagttttgggaattggttcttcaatcaatgaactcagt
tcatcaaacataagtgtacatcgtgaccccttccttcggagtatagcacattggatttta
gaagattatagtgctgctttggaaacattaataagacaaccatttacagaagatgaagat
caagtcatgatgtcagcctgtaatcccatagtttttaatttctacaattatctaagaaca
catccacttttgttaagacgtcattttggatcatctgacacattttcaacgcacatggct
ttaacaggaaaaagtggactggcaggaacaattaatctaagtgaaaggagattatatttt
actactgccagtgctcacttaaaatctggctgccccatgttggctttggaagtattgtca
aagatgcccaaagttgtcaagaaaacaaaacacttttgtagagcatctagttttttcact
agtaaagaatcttcttctccattacattcgggtgagagagaagataagtcttctgctgtt
gactggtcacagtcagtgctgaatggttttgaatcttcttcagagggttcctcagagaga
cagtcaaactccaccttttcttttgattggagccaaccaagtatggtatttcaggatgac
tctttggagttaaaatgggatagtgataatgatgaggaaaatgaagatcctcctatttca
atgaaagaaataaaacctttggcaagaaaaacagataaaaaattagatgaattaagcagt
tacacagattccttaagcacactagatgaaagtgatattttaaatccatctgaagacata
attgctgttcaactgaaatttagagcatgtttaaagattctcacagtggaacttcgtact
ttatctacgggctatgaaatagatggtgggaaattgcgttaccagctctaccactggctt
gaaaaagaggtggtagctcttcaaaggacttgtgacttttgctcagatgaagaacaactg
cagaccacattgagtcaagatacaggagaatctggattaagtgaggatattgatggtttg
catcaccaaacaaaagtgaaacaacggaaagaaagtttccaggaaaaaagacagtggctc
ttgaagtatcagtcactcttgagaatgtttcttagttactgcgtacttcatggctctcat
ggtgggggtcttgcatctgtgagaatggaattaattttacttttacaagaatctcagcag
gaaacagcagaaccagtatttcctaaccccctgtcagagcagacttcagtgcctcttctc
tttgcttgtacagccagtgccaaaacagtagttgccaatccattattgcaccttagtaat
ctaacacatgatattctacatgccataataaattttgattcaccacctcaccctgatagc
caaagcaataaagtatatgtaatgcatactttagcagcttcactttctgcttgtatttat
cagtgcctttgtggtagtcataactacagttcatttcaaacaaatcagtttactggaatg
gtgtatcagacagtactgcttgcccatcgacattctttgagaacaggaagtttagatgaa
tcagtaactcccaacacatcaccagctcaatggccaggaataagttgtctaattcagctt
ttgaattcttctggtgaagaagcccaatcaggacttacagtcttgctttgtgaaattctc
actgcagtgtatcttagtctgttcattcatgggttggcaacacattgtagtaatgaacta
tttcggattgtagcccaccccctaaatgaaaatatgtggtctgcagtatttggtggagga
gtacagatgcactcaaaagcctcatctggaaggcactatgctatgcctagccctcaccag
gtagtcgtattctccatggaatgtgtgggcttttccaaagctctttcagccatcagttct
catagccctcccactcttgcagttgaaggagaaaaacaaaataaacactttagtccatca
aaagtatcttgcagagagtcttcccccatagcctcttcctcagtaaatcaggagtcactg
actgtcaaagagaagttcatcccacccgagttaagtatctgggactacttcatagccaag
ccttttctacccccttcccagagtagagcagagtatgattctgaggagagtctagaaagt
gatgatgaggatgaggaagatgacgatactttcccttctgatcaccatctccaggaacat
tctaattcaaattcattcagttggtcattgatgcgattggctatggtccagttggtgctc
agcaatttgaagacattctattcctttgcaggtcatgatctttcagaactgcctgttagt
tcacctctttgtcatgcagttcttaaaactcttcagtgttgggaacaagttcttctccga
agacttgaaatccatggtggacctcctcaaaactatatctccagtcatacttctgaagag
aatgtgtctgcgggtcctgcaatactccgtcacaaagctttattagaacctacaaacact
cctttcaaatccagaaatcatctggcactgtctgtgaagaggctttggcagtacttggtg
aaacaggaagaaattcaagaaacttttatcagaaatatattcacaaagaaacgatgccta
aatgagtcattagaggacaacaatgaaaccatcaaaaattctatgatggaggagccaaac
atcaataagatagaggcagatttgggatatcctggaggtaaagcaagaattattcataaa
gaatctgatatcattactgcctttgctgttaataaagcaaatagaaattgcatagcagtt
gcctctagccatgatgtacaagaactggatgtctctggaattctcgccacacaaatctat
acatgggtggatgatgatgcagaaacagaatccaaaggatcagaagacttcttggtgata
catgctcatgatgatttaacagctgtgcagggttcaaccccatacacacacagcaaccct
ggcactccaatcaatatgccatggcttggaagtacccagacgggaagaggcgcatctgtg
atgacaaagaaagccattaataatgtcagaaggatgacatcacatccaactcttccttac
tatctgacaggtgctcaagatgggagtgtcagaatgtttgaatggggccattctcagcaa
ataacctgttttcgaactggtggcaactcaagaattacaagaatgagatttaactatcag
ggaaataagtttggaattgttgatgctgatggatatttaagtttgtatcaaacaaactgg
aaatgttgtccagttactgggagcatgcctaagccatatctggcttggcagtgtcataac
aagacagccaatgattttgtcttcgttagttcctcctctctgatagctacagctggtctt
tcaactgacaatagaaacatatgtctatgggatactctagtagcacctaccaatagttta
gtccatgcttttacctgccatgatagtggagccacagttttagcatatgctcccaaacat
caactgctaatatcaggtggcagaaaaggtttcacatgtgtatttgaccttcgacaacgg
caacagaggcagttttttcagagtcatgattcccctgttaaagccattgctattgaccca
actgaagagtactttgttacaggatctgcagaaggcaatataaagatttggagtctttcc
tcctttagtcttctccatacttttatcaatgaacatgctcgacagtctatttttagaaat
attggaactggagtcatgcagattgagacaggaccagcaaatcacattttctcttgtgga
gctgatggaacaatgaaaatgaggatactgccggatcagtttagtcctttaaatgaggtg
ttaaaaaatgatgtgaaattgatgctgtaa
DBGET
integrated database retrieval system
