Phodopus roborovskii (desert hamster): 127234216
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Entry
127234216 CDS
T08852
Symbol
Pcdhb1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127234216 (Pcdhb1)
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127234216 (Pcdhb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
MP_p6
Cadherin_4
Ly49
Motif
Other DBs
NCBI-GeneID:
127234216
NCBI-ProteinID:
XP_051057010
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MMAAACRKPLQNRQVRSLLLLWCVSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKL
AERGARLVAEGNKLHFRLHRKTGDLFVKEKLDREALCGKTDPCVLHFEIILSEPLQSFRV
EVRVFDINDNAPVFLNKEPFLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANAYFH
LHTRFRSHGPKYAELVLDNPLDREEQPEVNLTITAVDGGSPPKSGTANIRVVVLDVNDHV
PQFSRLVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENSEAVLQTFLVDPQTG
EVLLRGPLDFETTETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPED
SPLQTVVALFSIRDRDVRVGGKITCFLRGDLPFVVKHTFRNSYSLVTDRSLDREDVSSYN
ITLVAMDTGPPSLSTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAVFIGKVHAEDL
DVGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGF
LSLSSQVTVRVVVLDDNDNRPMILYPLQNGSLPCNDLVPRSAEAGYLVTKVVAVDGDSGQ
NSWLSYHLLKATDLGLFSVQRQNGEIRTLRQISERDPMMQKLIILVQDHGQPALSTTASL
NILLVDGFSEPYLQFQDPSKHSRKVNPTTKYLVISLAVLSFLFLFSVTVIFIIHVYQKIK
HRDKITIQEHFYDDCNFPNNLVQGRGNGSLPQPCPYDMCSATGTGNSEFRFLKRFMPNFP
FPHATGEVKTEDDSSLPPNSNRNQSRGSKGHARIDDDYM
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagctgcttgcagaaaacctttgcaaaacaggcaggtaagatctcttctcctt
ctctggtgtgtgtctgtgggaggcgccgccaccatccgctattccgtggcagaggagatg
gagagcggctcctttgttgctaacgtggctaaggacctggggctagaggtggggaagctg
gcagagcgcggggcgcggctggttgccgagggcaacaagttgcatttccggctccaccgt
aagactggagatttgttcgtcaaggagaaactggatcgcgaagcactctgtggcaaaacc
gacccgtgcgtgctgcactttgaaattattctctcagagccgctgcaatctttccgtgtg
gaagtcagagtatttgatatcaatgacaatgccccagtttttctaaacaaggagcctttt
ttaaagattccggagagcacccctttgggctcacgttttccactgcagagcgctcaggat
ctggacgtgggactcaatggtctccaaaactacaccttgagtgcaaacgcctatttccac
ttgcacacacgcttccgaagccacggacccaaatatgcggaacttgtgttggataatccc
ctggatagagaggagcagcctgaagtcaacttgaccattacagcggtggatggtgggtcc
cctcccaaatctggcaccgccaacattcgagtggttgtcctggacgtcaatgaccacgtg
ccccagttctctcgcttggtgtaccgcgctcaagtgccagagaacagcgacaatggctct
ttagtggtggtggtgactgccacggacctggatgagggcaccaacaagcagataacttac
tctttagctgaaaattcagaagcagttctccagacgtttcttgtcgatccgcaaactgga
gaggttctactccgcgggcccctagattttgaaactacggaaacatatgacattgacatt
caagctacagatggaggaggcctttctgcccacagcaaagtcttagtggaagtggtggat
gtaaatgacaatcccccggaagtgactgtctcctcggtgtccagccctcttcctgaggac
tctccgctacagactgtagtggcccttttcagtatccgagaccgggatgtgcgagtcgga
ggaaaaatcacctgcttcctcagaggagacttgccatttgtagtcaaacacacattccgg
aattcttactctctggtcactgacagaagcttggatagggaggacgtctctagttataac
atcacactcgttgctatggacactggaccacccagcctatctacagagactgtgattgaa
gtgctaatatccgacataaatgacaatcctccggtctttcaggaggattcctacatcttg
actgttcgtgaaaacaacagtcctgcagtttttattggcaaagtccacgctgaggatcta
gatgtgggggaaaatgcccaagtaacatattccctgctgcctccaaagagtggagacctg
tcagtctttgcttacatctctataaattcagacaatggaaagctctatgcactaagaacc
atggattatgaggccattcaagactttcagtttgtggtaaaggcaactgatgggggtttt
ctgtcactgagtagccaagtcactgtcagagtggttgtcctcgatgacaatgacaatcgt
ccaatgatcttgtacccactgcagaatggcagtttgccctgcaatgacctggtgccaagg
tctgcagaggcaggttacctggtgaccaaagtggtggctgttgatggtgactctgggcag
aattcttggctttcataccatctccttaaagccactgaccttgggttgttttctgttcag
agacaaaatggggaaatacgtacactgaggcagatatctgagagagaccccatgatgcag
aaactgatcattcttgttcaggatcatggccaaccagctctctccacaactgcctcactc
aacatcctgctggtagatggcttttcagagccttacttgcagttccaggatccatccaag
cattctagaaaggtaaatccaaccacaaaatatttggtcatctctctggctgtgctttct
tttctttttctcttctccgtcactgtgatcttcattatacacgtctaccagaagattaaa
cacagagacaaaatcacaattcaagagcacttctatgatgactgtaatttccctaacaat
ctagtgcaaggaagaggcaatggttccttgccccagccttgtccttatgacatgtgctca
gccactggaactggcaatagtgaattccgttttcttaagcgatttatgcccaatttcccc
tttccccatgccactggagaggtgaaaacagaggatgattccagtttgcctccaaattct
aatagaaatcagtctcggggttcaaagggtcatgcccggatagatgatgactatatgtaa
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