Phodopus roborovskii (desert hamster): 127234361
Help
Entry
127234361 CDS
T08852
Symbol
Myo5b
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vb
KO
K10357
myosin V
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127234361 (Myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127234361 (Myo5b)
04131 Membrane trafficking [BR:
prob04131
]
127234361 (Myo5b)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127234361 (Myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prob04812
]
127234361 (Myo5b)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127234361 (Myo5b)
mRNA cycle factors
P-body specific factors
127234361 (Myo5b)
Membrane trafficking [BR:
prob04131
]
Others
Actin-binding proteins
Myosins
127234361 (Myo5b)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127234361 (Myo5b)
Cytoskeleton proteins [BR:
prob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127234361 (Myo5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
127234361
NCBI-ProteinID:
XP_051057222
LinkDB
All DBs
Position
Unknown
AA seq
1857 aa
AA seq
DB search
MDPKGGSFPVLHYNTQQYTRVWIPDPDEVWRSGELTKDYKEGDKSLQLRLEDDTILEYPI
DVQNNHLPFLRNPDILVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINP
YEQLPIYGQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVS
AKYAMRYFATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIGFDKKY
HIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTSHGG
NTTIEGVNDAEDFEKTRQALTLLGVRESHQISIFKIIASILHLGSVEIQSERDGDSCSIP
PQDEHLSNFCRLLGVEHSQMEHWLCHRKLVTTSETYIKTMSLQQVVNARNALAKHIYAQL
FSWIVEHINKALHSSLKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFK
LEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERH
SNSQHFQKPRMSNTAFIVIHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLF
QDDKDSVPATNTAKNRSSSKINIRSSRPPMKVSNKEHKKSVGFQFRTSLTLLMETLNATT
PHYVRCIKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLM
KKRELVNTDKKSICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATVMI
QKTVRGWLQKVKYQRLKAATLTVQRFYRGHLARRLAEHLRRTRAAIVFQKYYRMQRARLA
YRRIHRAAVVIQSFTRAMFVRRNYCQVLKEYKATIIQKYARGWMARRHFQRQRDAAIVIQ
CAFRRLKAKQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAV
TSTHAMEVEKLKKELAHYQQNQEADTSLQLQEEVQSLRTELQRAQSERRVLEDAHSRENS
ELRKRVADLEHENALLKDEKEYLNNQILHQSKAESSQSSVEENLLMKKELEEERSRYQNL
VKEYSLLEQRYENLRDEVTMLKQTPGHRKNPSNQSSLESDSNYPSISTSEIGDTEDALQQ
VEEIGVEKAAMDMTVFLKLQKRVRELEQERKKLQVQLEKEQQDNKKVQVEQQNNGIDVDQ
DADLAYNSLKRQELESENKKLKNDLNELRKAVADQAMQDNSTHSSPDSYSLLLNQLKLAN
EELEVRKEEVLILRTQIMNTDQRRLSGKHMEPNINSRTSWPNSEKHVDQEDAIEAYHGVC
QTNSKTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQAQSLEHEEEVERLKAQVEALKEE
MDKQQQTFCQTLLLSPEAQVEFGVQQEISRLTNENLDFKELVEKLEKNERKLKKQLKIYM
KKAQDLEAAQALAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQ
MLSGTVPCLPAYILYMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNDDFEMTSFWLS
NTCRFLHCLKQYSGDEGFMKQNTPKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAES
LLQPMIVSAMLENESIQALSGVRPTGYRKRSSSMVDGENSYCLEAIIRQMNSFHTVMCDQ
GLDPEIILQVFKQLFYMINAVTLNNLLLRKDACSWSTGMQLRYNISQLEEWLRGKNLHQS
GAVQTMEPLIQAAQLLQLKKKTQEDAEAICSLCTALSTQQIVKILNLYTPLNEFEERVTV
SFIRTIQAQLQERNDPQQLLLDSKHMFPVLFPFNPSALTMDSIHIPACLSLEFLNEV
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaaagggggtagcttccctgtgctgcactacaacacacagcagtacacaagg
gtctggatccctgacccagatgaagtgtggcgctcgggtgaattaaccaaggactacaaa
gagggggataaaagcctgcagctcagactggaagatgacacaatcctggaatacccaatt
gatgttcaaaataaccatctgccattcttacggaatccagacatcttagtaggagaaaat
gacctcactgcactcagccatctccatgagcctgcagttctgcataacttaaaagtccgt
ttcctggagtccaaccacatctacacttactgtggaattgtgcttgttgccatcaatcca
tatgagcagctgccaatctatggacaagatgtcatctatgcctacagtggccaaaatatg
ggtgacatggaccctcacatctttgctgtggcagaagaagcctacaagcagatggccagg
gatgaaaagaaccaatccatcatagtcagcggagagtctggagcagggaagactgtatca
gccaagtatgccatgcgctattttgccacagttggtggctcagccagtgataccaacatt
gaagagaaggtcctggcatccagtcccatcatggaggccattgggaatgccaagaccact
cgcaatgacaatagcagccgctttgggaagttcattgaaattggctttgataaaaagtac
cacatcattggggccaacatgaggacctacttgctggagaagtccagggtggtttttcag
gcagaagatgagaggaattaccacatcttttaccagctctgtgctgctgccagtctcccc
gagtttaaagagctcgctttaacctgtgcagaggactttttctatacatcccatggagga
aacacaaccatcgagggtgtcaatgatgcagaggactttgagaagactcgacaagccctc
acactccttggagtgcgggaatctcatcaaataagcatctttaagataattgcttccatc
ttgcaccttggaagtgtggagattcagtctgagcgtgacggggattcctgcagcatacca
cctcaggatgaacatttgagcaacttctgccgcctgctgggagtggaacacagtcagatg
gagcactggttgtgccaccgcaagctggtcaccacctcagagacctacatcaagaccatg
tccctgcagcaggtggtcaatgcccggaacgccctggccaagcacatctatgcccagcta
ttctcctggatcgtggagcacatcaataaggccctgcactcatccctgaagcagcactcc
ttcatcggggtcctggacatctacgggtttgagaccttcgagattaacagcttcgaacag
ttttgtatcaactatgccaatgaaaagctccagcaacagttcaattcgcatgtattcaag
ctggagcaagaagaatacatgaaggagcagatcccatggaccttgattgacttttatgat
aatcaaccttgtatagacctcatagaagcaaagctgggtatccttgacctgttggatgaa
gagtgtaaggtccccaaaggaactgatcagaattgggcccagaagctctacgaacggcac
tccaacagccagcacttccagaaaccacgcatgtccaacacagccttcattgtcatccac
tttgcagataaggtggagtacctttccgatggttttcttgagaaaaatagggatacggta
tatgaagaacagatcaacatcctgaaggccagcaagttcccactagtggctgacttgttc
caagatgacaaggactctgttcctgccaccaacacagctaaaaatcgatcatcttcaaaa
atcaacattcgatcttccagaccccccatgaaggtctccaacaaggagcacaagaaatct
gtgggcttccagttccgcacttccctaaccctgctgatggagaccctgaatgccacaacg
ccacactacgtccgatgcatcaagcccaacgatgaaaagctccccttccacttcgaccca
aagagagccgtgcaacagctcagagcctgtggagtattggagaccattcggatcagtgca
gctggctacccatccaggtggacctaccatgacttcttcaatcggtaccgggtgttgatg
aagaagagagagcttgtcaacactgacaagaagagtatctgcaagtctgtcttagagagc
ctcatcaaggatccagacaaattccagtttggccgcaccaagatcttcttcagggcgggc
caggtggcttacctggagaagcttcgggcagacaagttccgggaggccactgtcatgatc
cagaagacagtcaggggctggctgcagaaagtgaagtatcagaggctgaaggcagctacc
ttaactgtgcagaggttctacagaggacacctggcccgcagactggctgagcacctgcgg
agaacccgtgcagccatagtgttccagaagtactaccggatgcagagggcccgcctggcc
taccggagaatccacagagctgcagttgtcatccagtccttcacacgggccatgtttgtg
cgaagaaactactgccaggtcctcaaggagtataaagccacaatcatccagaagtatgcc
cggggatggatggcacgtagacatttccagcggcagcgggatgcagccattgtcatccag
tgtgccttccggcggctcaaggccaagcaggagctgaaggccctcaagattgaggcccgc
tctgcagagcatttaaaacgtctcaatgtgggcatggagaacaaagtggtccagctacag
cggaagatcgatgaccagaacaaagagttcaagactctgtcagagcagttgtctgcagtc
acctccacacatgccatggaggtggagaagctgaagaaggagctggcacattaccagcag
aaccaggaggctgacaccagcctgcagctgcaggaggaggtgcagagcctgcgcactgaa
ttacagagggctcagtcagagcgcagggtcctggaggatgcccacagcagggagaatagc
gagctgagaaagcgagttgcagacctggaacatgaaaatgctctcttgaaggacgagaaa
gaataccttaataaccaaatcctgcaccagtcaaaagctgaatcttcccagagctctgtg
gaggagaacctcctgatgaagaaggaactggaggaggagaggtccaggtaccagaacctc
gtgaaggaatactccctgctggagcagagatatgagaaccttcgagatgaggtgaccatg
ctaaagcaaactccgggccacaggaagaacccatcaaatcaaagcagcttagaatcggac
tccaattacccctccatttccacttctgagattggagacactgaggatgcccttcagcag
gtagaggagattggtgtagagaaggcagctatggacatgaccgtcttcctgaagctgcag
aagagagtgcgggaacttgagcaggagaggaaaaagcttcaggtgcagctagaaaaggag
caacaggacaacaagaaagtgcaggtggaacaacaaaacaatggcatagatgtggaccag
gatgcagatctggcctacaacagtctgaagagacaagagcttgagtccgagaacaaaaag
ctgaagaacgacctcaatgagctgaggaaagctgttgctgaccaagccatgcaggacaac
tccacccacagctccccagatagctacagcctcctgctgaaccagctcaagctagctaat
gaagagcttgaggtccgcaaagaggaggtgctgatcctcaggacccagatcatgaacact
gaccagcgccgactgtctggcaagcacatggagccaaacatcaattccagaacaagttgg
cccaacagtgaaaaacatgtggaccaggaagatgccattgaggcctatcatggggtctgc
cagactaacagcaagactgaggattggggatatttgaatgaagatggagaactcggcttg
gcttaccaaggcctaaagcaagttgccaggttgctggaggctcagctgcaggcccagagc
ctggagcatgaggaggaggtggagcgtctcaaggcccaggtagaggccctgaaggaggag
atggacaagcagcagcagaccttctgccagaccctgctgctctccccagaggcccaggtg
gaatttggtgtccagcaggagatatctcgcctgaccaatgagaacctggattttaaggaa
ttggtagagaagctggaaaagaatgagaggaagctgaaaaagcagctgaagatttacatg
aagaaagcccaggacttagaagctgcccaggccttggcacagagtgacaggaggcaccat
gaactcacaagacaggtcacggtccagcgaaaagagaaagacttccaaggcatgctggag
taccacaaagaggacgaggctctcctcatcaggaacctggtgacagacctgaagccccag
atgctgtcgggcactgtgccctgtctgcctgcatacatcctctacatgtgcatcaggcat
gcggattacaccaacgatgacctcaaggtacactcattgctgagctccaccatcaacggc
attaagaaagtcctcaagaagcacaatgatgactttgagatgacgtcattctggctgtcc
aacacctgccgcttccttcactgcttgaagcagtacagtggggatgagggcttcatgaag
cagaacactccgaagcagaatgagcactgtctcaagaactttgacctcacggaatatcgg
caggtgctaagcgacctttccattcagatctatcagcagctcattaaaattgctgagagc
ttgttacaacctatgatagtttctgccatgttggaaaacgagagtatccaggcgctatct
ggtgtgaggccaactggctaccggaagcgctcctccagcatggtggatggagagaactca
tactgcctggaggccatcatccgccagatgaactcgttccatactgtcatgtgtgaccag
ggcctggaccctgagattatcctgcaggtgttcaaacagctcttctacatgatcaatgct
gtgactcttaacaacctgctcctgaggaaagatgcttgctcttggagtacaggcatgcag
ctcaggtacaatataagtcaacttgaagagtggcttcgaggaaaaaaccttcaccagagt
ggagcggttcagacgatggaacctttgatccaggcagcccagctccttcagttgaagaag
aaaacacaggaggatgctgaagccatctgctctctgtgtacagccctcagcacccagcag
attgtcaaaattttaaacctttacactcccttgaatgaatttgaagagcgggtaacagtg
tcctttataagaacaatacaggcccaactacaagagaggaatgaccctcagcagctactg
ctggactccaaacacatgtttcctgttctgtttccatttaatccgtctgccctgaccatg
gactcaatccacattccggcatgtctcagtctggagtttctcaatgaagtctga
DBGET
integrated database retrieval system
