Phodopus roborovskii (desert hamster): 127234373
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Entry
127234373 CDS
T08852
Symbol
Mex3c
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127234373 (Mex3c)
04121 Ubiquitin system [BR:
prob04121
]
127234373 (Mex3c)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127234373 (Mex3c)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127234373 (Mex3c)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127234373 (Mex3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
Prok-RING_4
zf-C3HC4
RING_XB3-XBAT31
KH_2
KH_DEAH11_2nd
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
127234373
NCBI-ProteinID:
XP_051057234
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MPSGSSAALALAAAPAPLPQPPPLPPPAGGPELEGDGLLLRERLAALGLDDPSPAEPGAP
ALRAAAAAAAQCQARRAAGLAPEESAPPGRPATSEPAELELEEDDEEGEEAELDGDLLEE
EELEETEEEDRPSLLLLSPPAATASQTQPIPGGPLGSVLLPAAGFDAREAAAAAGVLYGG
DDAQGMMAAMLSHAYGPGAGGAAAAALNGEQAALLRRKSVNTTECVPVPSSEHVAEIVGR
QGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREILSAAEHFSMIRASRNKN
GPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPV
FEVTGMPENVDRAREEIEMHIAMRTGNYIELNEENDFHYNGTDVSFEGGTLGSAWLSSNP
VPPSRARMMSNYRNDSSSSLGSGSTDSYFGSNRLADFSPTSPFSTGNFWFGDTLPSVGSE
DLAVDSPAFDSLPTSAQTIWTPFEPVNPLSGFGSDPSGNMKTQRRGSQPSTPRLSPTFPE
SIEHPLARRVRSDPPSTGNHVGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRRKHDCVI
CFENEVIAALVPCGHNLFCMECANKICEKRTPSCPVCQTAVTQAIQIHS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcggcagctccgcggccctggccctggcggcggccccggcccccctgccgcag
ccgcctccgctgccgccgcccgccggaggcccggagctcgagggggacgggctgctgctg
agggagcgcctggccgcgctaggcctcgacgaccccagcccggcggagcccggcgccccg
gcgctcagggccgcggcggcggcggcggcgcagtgccaggcccggcgggcggccgggctg
gctccggaggagtccgctccgcctgggcgcccggcgacctccgagccggcggagctggag
ctggaggaggacgacgaggagggggaggaagcggagctggacggagacctgctggaggag
gaggagctggaggagactgaggaggaggaccggccgtcgctgctgctgctgtcgccgccc
gcggccaccgcctcccagacccagccgatcccgggcgggcccctgggttcggtgctgctg
ccggccgcgggcttcgatgcccgggaggcggcggcggcggcgggggtgctgtacggaggg
gacgatgcccagggcatgatggcggcgatgctgtcccacgcctacggccccggcgctggc
ggggccgccgctgccgctctgaacggggagcaggcggccctgctgaggaggaagagcgtc
aacaccaccgagtgcgtccccgtgcccagttccgagcatgtcgccgagattgtcggacgc
cagggttgtaaaattaaagcactgagagccaagacaaacacatatatcaagacacctgtt
cgtggtgaagagcccatttttgttgtcactggacggaaagaagatgttgccatggccaaa
agagaaatcctctcagctgcagagcacttctctatgattcgtgcatctcgaaacaaaaat
ggccctgctctgggagggttatcctgtagtcctaatctgcctggtcaaactacagtccaa
gtcagggtcccctatcgtgtggtagggctagtagttggaccaaaaggagcaacaattaag
agaattcagcaacagacccacacatacatagtaactccaagcagagataaggagccggtc
tttgaagtgacagggatgcccgaaaatgttgatcgagcacgagaagaaatagaaatgcat
attgctatgcgtacaggaaactatatagagctcaatgaagaaaatgattttcattataac
ggtactgacgtgagctttgaaggtggcactcttggctctgcatggctttcttccaatcca
gttcctcctagccgtgcaagaatgatgtccaactatcgaaatgatagttctagttctcta
ggaagtggttccactgattcctattttggaagcaataggctggctgactttagtccaaca
agcccttttagcacaggaaacttttggtttggagatacactaccatctgtaggctcagaa
gatcttgcagtagactctcctgcctttgactctttaccaacatctgctcaaactatctgg
actccatttgaaccagttaacccactctctggctttgggagtgatccttctggtaacatg
aagactcagcgtagaggaagtcagccatcaactcctcgtctgtctcctacatttcctgag
agcatagaacatccacttgctcggagggttaggagcgacccccctagtacaggcaaccat
gttggccttccaatatacatccctgctttttctaacggtaccaatagttactcctcttcc
aatggtggttccacctccagctcacctccagaatcaagaagaaagcacgactgtgtgatt
tgctttgagaatgaagttattgctgccctagttccatgtggccacaacctcttctgcatg
gaatgtgccaacaagatatgtgaaaagagaacgccatcatgtccagtttgccagacagct
gttactcaggcaatccaaattcactcttaa
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