Phodopus roborovskii (desert hamster): 127234408
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Entry
127234408 CDS
T08852
Name
(RefSeq) F-box/LRR-repeat protein 20 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127234408
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127234408
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
Motif
Other DBs
NCBI-GeneID:
127234408
NCBI-ProteinID:
XP_051057276
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All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MADSLPLEMLTYILSFLPLSDQKEASLVNRAWYCAAQNALRETNVRYNIPVSSASLSAIK
SLGLRGISCISLTNLDGSPASHQVLQSVAYHLGPHLESLCLGGGSPTEASFLALILGCPV
LRTLDLSGCNSLFTSGTLLAQPETAQCVRKALSGLRDLSLAGLRDLTDLSFNHLSSCFPS
LERLSLAYCHLTFELGPTWGSISPQVSSPSQLSFHNLLQFIKERAGRLRALDLSGTGLPP
EALQALGQVTGLQLEELSLHSCRDLSSEAVAALCHQQPGLTSLDLSGCSELTDRALLAVS
RGLRHLRHLSLRKLQRLTDAGCTALGSLHELQSLDMAECCLVSGRELAQVLGSVHRAPPA
LTSLRLAYCSSLKDASVLSMIPALGPSLKVLDLSSCVALTNQTMQAICTYLIHLSVLRLA
WCKELQDWGLLGLKEPSEEAVLSPQLPQEVEYQALDPQEPNSEPQGSSLLMLQALQELDL
TACSKLTDASLAKVLQFPQLRQLSLSLLPALTDMGLAAVARGCPSLERLALSHCSHLSDE
GWTQAARFWPRLQHLNLSSCSQLTEQTLDTIGQTCKQLRVLDVAMCPGINMAAVKHFQAQ
LPQVTCIQSRFVGGADLTLTL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcactgcccctggagatgctcacatatatcctgagtttcctacctctgtca
gatcagaaagaggcctccctcgtaaatcgggcttggtactgtgcagcccagaatgccctt
cgggagacaaatgtgcggtacaacattcctgtgtcctctgcctcactctcggccatcaag
agcttgggcctcaggggcatttcatgcatcagcttgaccaatctggatggctcaccagct
tcgcaccaggtactgcagtctgttgcctaccacttaggcccacacctggaaagcttatgc
ctgggtgggggcagccccacagaggcatccttcttggccctgatcctgggatgcccagtc
ctgcgcacccttgatctcagtggctgcaatagtctctttacatcaggcactctgctggct
cagcctgagacagcgcagtgtgtccgaaaggcactgagtggccttcgtgatcttagcctg
gctggcctgcgtgacctgactgacctcagcttcaaccatctcagcagttgtttccccagt
ctggagcgcctctccttggcctactgccaccttacctttgagttaggaccaacctggggc
tccattagcccccaggtttcctctccctcccagctttccttccataacctgctacagttc
atcaaagaacgagctggtaggctgcgtgccctagacctcagtggtactggcttgccacct
gaggccctgcaagccctgggccaagtgactggactgcagctggaggagctgagcttgcac
agttgtagagatctctcctcagaggctgtggctgccctgtgccaccagcagcctggcctt
acttccctggacctcagtggctgctcagaactaactgacagggcactcttggctgtgagc
cgaggcctacgacaccttcggcacttgagtctgaggaaactacagcgactaactgatgca
ggttgtacagccctgggctccctgcatgaattgcagagcctggacatggctgagtgctgt
ctggtgagcggtcgggaactggcccaggtcctaggatcagttcatagagctccacctgca
ctgacttccctcaggctggcttactgctcttcactgaaggatgcctcagtgctctccatg
atcccagcactgggcccgagcctcaaagtgctagacttgtcttcctgtgtggccctcact
aaccagaccatgcaggccatctgtacctaccttattcacctgtcagtcctgcgcctggct
tggtgcaaggagctccaggactgggggcttttgggactgaaggagccaagtgaggaagct
gtgttaagtccccagctaccccaagaggtggaatatcaggccctagaccctcaggagcct
aattctgagccacagggctcctccctgctcatgcttcaggccctgcaggagttggacctc
acagcctgcagcaagctgactgatgccagtttggccaaggtgctccagttccctcagctg
aggcagttatcgttgagcctattgccagcacttacagacatgggcttggcagctgtggct
aggggctgtcccagtctggagcgcttggcattgagtcactgcagccacctcagtgatgag
ggatggacccaggcagccaggttctggccaaggctacaacacctcaacttgtccagctgc
agtcagctcacagagcaaactctggataccattgggcagacatgcaagcagcttcgagtg
ttggatgtagccatgtgtcctggtatcaacatggcagctgtcaagcactttcaagcacag
ctgcctcaggtgacctgcatccagtcccgcttcgtgggaggggctgacctgaccttaaca
ctttga
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