Phodopus roborovskii (desert hamster): 127234428
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Entry
127234428 CDS
T08852
Symbol
Ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127234428 (Ctcf)
03036 Chromosome and associated proteins [BR:
prob03036
]
127234428 (Ctcf)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127234428 (Ctcf)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127234428 (Ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
127234428
NCBI-ProteinID:
XP_051057318
UniProt:
A0AAV0A108
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSEENAEPDLDDNDEEEEPAVEIEPEPEPQPQPQPVAPAPPPAKKRRGRP
PGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQAATTDAPNGD
LTPEMILSMMDR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaggagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgtcgggaagggggccaggaagaagatgcttgccacttg
cctcagaaccagacagatggaggtgaggtggtccaggatgtcaacagcagtgtacagatg
gtaatgatggaacagctggatcctacccttcttcaaatgaagactgaagtaatggagggt
acagtggctcctgaagcagaggctgcggtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacagcccattaacataggagagcttcaacttgttcaagtacctgtt
cctgtgactgtacctgttgctactacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagagagtgaaccgatgatatgtcacaccttacctttg
cctgaggggtttcaggtggtgaaggtgggggccaatggagaagtggagacgctagagcag
ggggagctcccccctcaggaagaccctagctggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaacttcgttacacagaggagggcaaagat
gtggacgtgtctgtctatgattttgaagaagaacagcaggaaggtctgctgtctgaggtt
aatgcagagaaagtggttggtaatatgaagcctccaaagccaacaaaaattaaaaaaaaa
ggtgtaaagaaaacattccagtgtgagctttgcagttacacgtgtccaaggcgttcaaat
ttggatcgtcacatgaaaagccacactgatgaaagaccacataagtgccatctctgtggc
agagcattcagaacagtaaccctcctgaggaatcaccttaatacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgaccagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgtgattatgccagt
gtagaagtcagcaaattaaaacgacacattcgctctcatactggagagcgcccgttccag
tgcagtttgtgcagttatgccagcagggacacatacaagctgaaaaggcatatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccagagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcattgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctatattgagcagggcaaaaaatgtcgctactgtgatgctgtgtttcatgagcggtat
gctctcatccagcatcaaaagtcacataaaaacgagaagcgcttcaagtgtgaccaatgt
gattatgcttgtagacaggagaggcacatgatcatgcacaagcgcactcacacgggtgag
aagccttatgcctgcagccattgcgacaagacctttcgccagaaacagcttcttgacatg
cacttcaagcgttatcatgaccccaactttgtccctgcagcctttgtctgttccaagtgt
gggaaaacattcacacgccggaatacaatggcaagacatgctgataattgtgctggtcca
gatggtgtagagggggaaaatggaggagagactaagaagagcaaacgaggaagaaaaaga
aagatgcgttctaaaaaagaagactcctctgatagtgaagaaaatgctgagccagatctg
gatgacaatgatgaggaggaggagcctgctgtagaaattgaacctgagccagagcctcag
cctcagcctcaacctgtggccccagccccaccgcctgccaagaagaggagaggacgaccc
cctggaagaaccaaccagcccaaacagaaccagccaacagccatcattcaggttgaagac
cagaatacaggtgcaattgagaacattatagttgaagtcaaaaaagagccagatgctgag
cctgtggaaggggaagaagaggaggctcaggcagccaccacagatgcccccaatggagac
ctcacgcctgagatgatcctcagcatgatggaccggtga
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