Phodopus roborovskii (desert hamster): 127234509
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Entry
127234509 CDS
T08852
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127234509
03015 mRNA surveillance pathway
127234509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127234509
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127234509
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127234509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127234509
NCBI-ProteinID:
XP_051057440
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MELRFGSDCEWQLRKPNRHVEPRWPELLALSRPSPSPRAESTFPDLKWRAVVKTSANAEK
TDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGV
YAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANSYPQCLC
LSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLDRGQKVSEQIVIGTPGTVLDWCSK
LKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQK
VVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTAS
WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN
FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLD
TDDLDEIEKIAN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaggtttggctcggactgtgagtggcagttgaggaagcctaaccgccatgtt
gagccgaggtggccggagctgctggccctgtcgaggccgagcccgagcccaagggcggaa
tccactttccctgaccttaagtggcgtgctgttgttaaaaccagtgctaatgcagagaaa
acagatgaagaagagaaagaggacagagctgctcaatctttactcaacaagctcatcaga
agcaatcttgtggataacaccaaccaagtagaagtcctgcagagggacccaaactcccct
ctctactcagtgaagtcttttgaagagcttcgcctgaaaccacagcttcttcagggtgtc
tatgctatgggtttcaaccgtccatccaaaatacaagagaatgcattgcctttgatgctt
gctgaacccccacagaacttaattgcccaatctcagtctggtactggtaaaacagctgcc
tttgtgttggccatgctcagccaagtagagcctgcaaacagctatccccagtgtctctgc
ctctctccaacctatgagcttgctcttcaaacaggaaaagtgatcgaacagatgggcaag
ttttaccccgaactgaagctagcttatgctgttcgaggcaataaattggacagaggtcag
aaggtcagtgagcagattgtcattggcactcccgggaccgtcctggactggtgctccaag
ctgaagttcattgaccccaagaagatcaaggtgtttgttctggatgaggctgacgtgatg
atagcaactcagggccaccaagaccagagcatccgcatccagaggatgctgcccagaaac
tgccagatgctgctcttctctgccacctttgaagactcagtgtggaagtttgcccagaag
gtggtcccagaccccaacatcatcaaacttaagcgtgaagaggagactttggacaccatc
aaacagtattatgtcctttgcaataacagagaggagaagttccaggccctgtgcaacctg
tatggggcgatcaccatcgcccaagccatgatcttctgccatacccgcaaaacagctagc
tggctggcagcagagctctccaaagagggccaccaggtggctctgctgagtggagaaatg
atggtggaacagagggcagctgtgattgagcgcttccgggaaggcaaagagaaggtcctg
gtaaccaccaacgtgtgtgcccgtggtattgatgttgaacaagtgtctgtcgtcatcaat
tttgaccttcctgtggataaggacgggaacccagacaatgagacctacctgcatcgcatc
gggcgcacgggccgctttggcaagaggggtctggcagtaaatatggttgacagcaagcac
agcatgaatatcctcaacagaatccaggagcattttaataagaagatagaaagattggac
acagatgatttggatgagattgagaaaatagccaactga
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