Phodopus roborovskii (desert hamster): 127234671
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Entry
127234671 CDS
T08852
Symbol
Kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127234671 (Kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prob01007
]
127234671 (Kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prob03016
]
127234671 (Kars1)
Enzymes [BR:
prob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
127234671 (Kars1)
Amino acid related enzymes [BR:
prob01007
]
Aminoacyl-tRNA synthetase
Class II (A)
127234671 (Kars1)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127234671 (Kars1)
Prokaryotic type
Other AARSs
127234671 (Kars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Dec-1
Motif
Other DBs
NCBI-GeneID:
127234671
NCBI-ProteinID:
XP_051057715
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MLMQAAVRLVRGSLRQTSWAEWGQRELRLGQLAPFTTFHKDKPLSDRRSELKRRLKAEKK
VAEKEAKQKELSEKQLSQAAAATNHTADNGVGAEEETLDPNQYYKIRSQAVHQLKVSGED
PYPHKFHVDISLTQFIQEYSYLQPGDHLTDITLKVAGRIHAKRASGGKLIFYDLRGEGVK
LQVMANSRNYKSEEEFVRINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHML
PHLHFGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNI
IPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP
EFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKISYHPDGPEGQAYEIDFTPPFRR
ISMVEELEKTLGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLE
VTCINPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFE
EQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAM
KPEDKKETAAATETLESTTAGPSV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaagctgctgtcaggcttgttagggggtccctgcgccaaacctcgtgggca
gaatggggtcagagggaacttcgactgggtcaactggctcctttcacaacgttccacaag
gacaagccactttctgatagaagaagtgaattaaagagacgtctgaaagctgagaagaaa
gtggcagagaaagaggccaagcagaaagagctcagtgaaaaacagctaagccaggctgct
gctgctaccaaccacactgctgacaatggtgtgggtgctgaggaggagactctggaccca
aatcaatactacaagatccgtagtcaagcagtccaccagctgaaggtcagtggggaggac
ccgtacccacacaagttccatgtggacatctcactcactcagttcatccaagaatacagt
tatttgcagcctggggaccatctgactgacatcaccttaaaagtggcaggtcggatccat
gccaagagagcatctgggggaaagcttatcttctatgaccttcgaggagagggggtcaag
ttacaagttatggccaactcaaggaattataaatcagaggaagaatttgttcgtatcaat
aacaaactgcgaaggggagatataattggagttcaggggaatcctgggaaaaccaagaag
ggtgagctgagcatcatcccctatgaaatcacactcttgtctccctgcttgcatatgttg
cctcatcttcactttggcctcaaagacaaggagacaaggtatcgtcagaggtacttggac
ttgatattgaatgactttgtgaggcagaaatttattgtccgctctaagatcatcacatat
ataagaagtttcctggatgagctgggatttctagagattgaaactcccatgatgaacatc
attccagggggagctgtggccaagcctttcatcacctatcacaatgagctggacatgaac
ttatatatgagaattgctccagaactctaccataagatgctggtggttggtggcattgac
cgggtttatgaaattgggcgccagttccggaacgaaggaattgatttgactcacaatcct
gagttcaccacctgtgagttctacatggcctatgcagactatcatgacctcatggagatc
acagagaagatgctatcagggatggtgaaaagcattacaggcagttacaagatcagctac
cacccagatgggccagaaggccaagcctatgagattgacttcaccccacctttccgaaga
atcagcatggtagaagagcttgagaaaaccctgggtgtgaagctgccagaaaccagcctc
tttgaaactgaagaaactcgaaaaattcttgatgatatttgtgttgcaaaagctgttgaa
tgccccccacctcggaccacagccaggctccttgacaagcttgttggtgagttcctcgaa
gtgacatgcatcaatcctacattcatctgcgatcacccacagattatgagccctctggcc
aaatggcaccgctccaaagagggtctaactgaacgctttgagctgtttgtcatgaagaag
gagatctgtaatgcctacactgagctgaatgatcccatgcggcagcgacagctgtttgaa
gaacaggccaaggccaaggctgctggtgatgatgaagcaatgttcatagatgagaacttc
tgtactgccctggaatatgggctgcccccaacagctggctggggcatgggtattgatcga
gtcaccatgtttctaacagattctaacaatatcaaggaagtacttctgtttcctgccatg
aagcctgaagacaagaaggaaactgcagcagccactgaaacgctagaaagcacaacagcc
ggcccctctgtctag
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