Phodopus roborovskii (desert hamster): 127234738
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Entry
127234738 CDS
T08852
Symbol
Taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127234738 (Taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127234738 (Taf5l)
03036 Chromosome and associated proteins [BR:
prob03036
]
127234738 (Taf5l)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127234738 (Taf5l)
Coactivators
SAGA/TFTC/STAGA complex
127234738 (Taf5l)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127234738 (Taf5l)
STAGA complex
127234738 (Taf5l)
TFTC complex
127234738 (Taf5l)
SAGA complex
127234738 (Taf5l)
SLIK complex
127234738 (Taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
RMC1_N
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_like
Beta-prop_IP5PC_F
PROPPIN
Ge1_WD40
WD_LRWD1
Nbas_N
ODR4-like
Motif
Other DBs
NCBI-GeneID:
127234738
NCBI-ProteinID:
XP_051057790
UniProt:
A0AAV0A0F9
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQVQVAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMATNLTVQSESGCANAVSA
APCQAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQSGPKSTVESFY
SRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLAVHIHLDVQPAKRTDYQLYASGSSSRSESSGLEPPDVPNPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDTKLLAAGFDNSCIKLWSLRSK
KLKSEPHHVDTSRIRLACDTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIR
STCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcacggagcaggttcaggtggcagtgtcctgctacctcaaacgccgg
caatacgtggactcagaaggccccttgaagcaaggcctgagactatcacaaacccctgag
gagatggcaaccaacctcacagtccaatcagaatctggttgtgccaatgcagtgtctgca
gccccttgccaggcagaaccccagcaatatgaagtacagtttggacgactgagaagtttt
ctcactgattctgactcccagcacagccatgaagttatgcctctcctctaccccctcttt
gtctacctccacctcaacctggtccagagtggccccaagagcacagtggaaagcttctat
agccgcttccatggaatgttcctacagaatgcaagtcagaaggacatcattgagcagctg
caaaccacacagaccatccaggacattctttcaaacttccagcttcgtgcattcctggac
aacaaatatgtggtccgtctccaggaagatagctacaactaccttatccgctacctccaa
agcgacaacaacactgccctgtgcaaggtgcttgccgtgcacattcacctagatgtgcag
cctgccaagaggacagactaccagctgtatgccagtggcagctcttcccgtagtgagagc
agtggcctggagccaccagatgtgcccaaccctattctgcagaatgaggctgccctggaa
gtcttgcaggagagtatcaagcgggtcaaggatggacctccctccctcaccaccatctgc
ttctatgccttctataacacagagcagctgttgaatactgcagagatctcctctgatacc
aaacttctggctgctgggtttgacaactcctgcataaagctctggagcttacgatccaaa
aagctgaaatcagaaccccaccatgtggacacatcccgtatccgtctagcttgtgacact
ctggaggaagaggagaatgaggaggataatacaggcacagagatgaagatcctgcgggga
cactgtggcccagtgtacagcacacggttcctcgcagacagctcggggctgctctcttgt
tctgaagatatgtccatcaggtactgggacctcgggagcttcaccaataccgtgctgtat
cagggacatgcctaccctgtatgggatgtggacatcagcccctacagcctgtattttgcc
agtgggtcccatgaccgtactgccaggctgtggtcctttgatcggacgtacccactgagg
atatatgcaggacacctagctgatgtggactgtgtcaaattccaccccaactcaaactac
ttggccacaggttccactgacaaaactgtccggctgtggagtgcccaacagggcaactca
gtgcggctattcacgggtcaccggggtcccgtgctttccctttccttttctcccaatggt
aagtacttggcatccgctggtgaggaccagcggttaaagttgtgggacttggcctctggg
acactttttaaagaactgagaggccacacggacagtatcaccagtctggcctttagtcca
gacagcggtctggttgcctctgcctccatggacaactctgtgcgtgtctgggacatcaga
agcacatgctgcaacacacctgctgatggctcttcaggtgagctcgtgggtgtgtacaca
ggacagatgagcaacgtcctgagtgtgcagttcatggcctgcaacctcctcctggtgact
ggaatcacacaagagaatcaagaacattaa
DBGET
integrated database retrieval system
