Phodopus roborovskii (desert hamster): 127234816
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Entry
127234816 CDS
T08852
Symbol
Cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127234816 (Cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127234816 (Cnot10)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127234816 (Cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_19
ARM_TT21
TPR_14
TPR_12
TPR_8
TPR_MalT
TPR_7
DUF6058
Motif
Other DBs
NCBI-GeneID:
127234816
NCBI-ProteinID:
XP_051057833
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MKSLSVKSVKVCASKSSVRLRQPCSLGQGRRKVKLLEERSYPLSIGNGDYFWTSKDTLWD
YVQTLSDQGAEKHEGAGQSPGVTDQEKELSTSAFQAFTSGNYDACLQHLACLQDINKDDY
KIILNTAVAEFFKNNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTHQAEKALHLLAVLEKMISQ
GSSNKNGKNETGNNSNKDGSNPKTESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIKS
VMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLGC
IHFAMSKHNLGIFYFKKALQENDNVCAQLSAGGIDPGKKFSGRPMCTLLTNKRYELLYNC
GIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPTKKGIV
QSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASVEFAAICLRNALLLLPEEQQDPKQ
ENGSKNSNQLGGNTESGGESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALSHADQLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQMIKRNQLLPAVKAHCDVRK
KPVFQPAHPMQPIQMPSFTTVQRK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttgagtgtaaagagtgtcaaggtctgtgcatccaagagctctgtacgcctt
cgtcagccgtgttcgttaggccagggcagaaggaaggtgaagcttctggaggagcggtct
tacccgctttccattggcaatggagactacttttggacaagtaaagatacactgtgggat
tatgtgcagacgctgtctgatcagggagcagagaaacatgaaggggcaggccagtcgcct
ggggtcaccgaccaggagaaggagctgtccaccagtgctttccaggccttcacatctgga
aattatgatgcctgtctgcaacaccttgcctgtctccaagatataaacaaagatgattac
aaaataattttgaacacagcagtagctgaattttttaaaaataatcaaacaacaacagat
aatttgagacaaacacttaaccagctgaagaatcaggttcactcagctgttgaagaaatg
gatggattagatgatgttgaaaacagcatgttgtattataatcaagcagtcattctttat
catctgcggcagtatacagaggccatatctgttggtgaaaaactttatcagttcatagaa
ccttttgaagaaaagtttgcccaagcagtgtgctttctgcttgtagacttgtatatatta
acccaccaagctgagaaagctctgcatcttcttgctgtcctagaaaaaatgatttcacag
ggcagcagcaacaaaaacgggaagaatgagactggcaataatagcaacaaggatggatct
aatcctaagactgagagtggagctctaatagaggctgcaaagtccaagatacaccagtac
aaagtcagagcatacatccaaatgaagtccctgaaggcatgcaaacgggaaatcaagtct
gtcatgaacacagctggaaattctgcaccctccctgtttctcaaaagcaattttgagtac
ttaaggggcaattatcgcaaagcggtgaagctcttaaatagttcaaacattgccgagcat
ccaggcttcatgaaaacaggtgaatgcttgaggtgcatgttctggaataatcttggttgc
atccattttgccatgagcaaacacaatttgggaattttctactttaagaaggctctgcaa
gaaaatgacaatgtgtgtgcccagctcagtgcaggtggcattgatccaggcaaaaagttt
tctggaagacccatgtgtacattgctaaccaacaagaggtatgaactgctgtataactgt
gggatccagctgctgcacatcgggaggccgctggctgccttcgagtgtctgattgaagct
gttcaggtttatcatgcaaacccccggctttggctgcggctggctgaatgctgcattgct
gccaataaagggacttctgagcaagaaactaaaggtcttcctaccaaaaaaggaattgta
cagtctattgttggtcaaggatatcaccgtaaaatagttctggcatcacagtctattcag
aacactgtctacaatgatgggcagtcttcagccattcctgtagccagtgtggagttcgca
gccatctgtctgagaaatgccttgttgctgttacctgaagaacaacaggacccaaagcag
gagaatggctccaagaacagcaaccagctaggagggaacacggagagcggcggcgagagc
agcgagacgtgcagcagtaaaagccatgatggagataagttcattccagctccaccttct
tctccactgaggaagcaggaattggaaaacctaaagtgctccatccttgcgtgcagcgct
tacgtggctctggccttaggtgataacctcatggctttgagtcacgcagaccagctcctt
cagcagcccaagctgtcaggctctctcaagtttctgggccatttatatgctgcagaagcc
ctcatctcccttgacagaatatccgatgccattacgcacttgaacccagagaatgtcact
gatgtctccttagggatctcttcaaatgagcaggaccaaggatcagacaagggtgaaaat
gaagcaatggaatcctctggcaagagagcccctcagtgctaccccagttctgtcaactct
gctcggactgtgatgctcttcaacctgggcagtgcctactgcctgaggagcgaatatgac
aaagcccggaagtgtctgcaccaggcggcttcgatgatccatccgaaagaggtgccccct
gaggccatcctactggccgtctaccttgaactgcagaatggcaacacacagctggccctg
cagatgatcaagcggaaccagctgctgcccgcagtgaaggcacactgtgacgtgaggaag
aagcctgtgttccagcctgctcaccccatgcagcccatccagatgccctcattcaccacc
gtgcagaggaagtaa
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