Phodopus roborovskii (desert hamster): 127234858 Help Entry 127234858         CDS       T08852                                  Symbol Nlrc5 Name (RefSeq) protein NLRC5   KO K22615   NLR family CARD domain containing 5 Organism prob  Phodopus roborovskii (desert hamster) Brite KEGG Orthology (KO) [BR:prob00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:prob04054]     127234858 (Nlrc5) Pattern recognition receptors [BR:prob04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    127234858 (Nlrc5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Atypical_Card NACHT LRR_6 LRR_4 NLRC4_HD2 AAA LRR_8 AAA_16 NPHP3_N AAA_25 NOD2_WH nSTAND3 AAA_22 Motif Other DBs NCBI-GeneID:  127234858 NCBI-ProteinID:  XP_051057851 UniProt:  A0AAV0A013 LinkDB All DBs Position Unknown AA seq 1838 aa AA seqDB search MDSESLQLGNENLWAWFVRLLSQNSEWLSAKVKFYLPTMDLDCSNMAPEPEVIHHQLRRL YTQGLATWQSFIYSLCMELDVPLELEVPLLSIWGQKDEFSNQIGAGEDSHPEPLQHHGVK RPSQSCGSSPHRKHSRKQQLELAKKYLKLLKTSAQQNHGGECPEAGHTHASPQAYIPPIL QWSRDTSPLNAQEGATIGDPNTADDMDVSIQDLFNFKAPKGPRVTVLLGKAGMGKTTLAH RLCWRWANGQVDHFQALFLFEFRRLNMITHLLTLPQLLFDLYLSPESDSDAVFQYLKENA HQVLLIFDGLDEALHSSSKGADNAGSALNLFSDLCRGTLLPGCWVMATSRPGKLPACVPT EATMVYMWGFDGLRVEKYISHFFSDLPSQELALAEMRTNERLRGMCAVPALCQVACFCLR HLLPRSPPGQSTALLPTVTQLYLQMVKTFSHSGTLPATSLLGLGKVAFRGLDTGKVIFSI EDIPSPLMAFGSVHSLLTSFCIHTSTGHQEIGYAFIHLSLQEFFAALYLMASDTIDKNTL TYYVTLNSHWILRTKARLGLSDHLPMFLAGLASHTCHAFLCHLSQQDEAWVGSRQAAVVQ VLRKLGSRKLTGPKMIELYHCVAETQELELVRFIAQSLPFQLSFHNFPLTRADLAALANI LEHKTVPIHLDFDGCPLEPHCPEALVGCGQVENLSFKSRKCGNAFAEALGRSLPTMGSLK MLGLTGSKITARGISHLIQALPLCSQLEELSLHDNQLKDPEVLSLVELLPCLPKLQKLDL SRNSFSVSTLLSSVKLATTYPSVRKLQVRESDFIFLLSPITEKAVQQSEASDLQDKDSLK EKGQSRSLELRLQKCQLMVHNAEVLVELFQKGPQLEKLDLSGNHLEDEGCRVVAEAASQL QIAQKLDLSDNGLSKMGVTYVLRAMSTCGTLEELHISLLSNTAVLTFSQEPRKQERSCKR GTPLTSFASPVASETSPSSRRIRLTHCGFLAKDIERLCKALRAVCQPHHLGHLDLSDNSL GDEGVALLAKLLPGLGPLQSLNLSRNGVSLDAVFGLITCMSSLQWVFHLDVSLDSDHILL GGAGTGRDAPAGRCGPEFVAGGPLLAFSSHYTSRSFRLQGCQLEPLSLACLCATLEKCPG PLEVHLSCKTLSDESLKTLMQCLPQLPQLSLLQLSHTVLSSRSLFLLADVFNLCPRVQKV NLRSLCHAVLHFGSKEEQEGVCFGFPGCSLSQEHMEPLCCALSRCKALSQLDLTDNLLDD SGLRCLLECLPQLPICGWLDLSHNSVSQEGVLCLLETLPSCPRVCEISVSLGSELNFRIH LSREEEAETKLRMCECSFGPEHLSRLASSLSQAQQLTELTLTRCHLDLPQLTNFLNLVNR PAGWLGLRLEEPWVGHISLPAVMEACAQASGCLTELSLSETQQQLWLRLDFPHQEDSSEV MANRLAHCDLGTDHSLLMRPLMETCARLQQLSLSQVNFSDDDDTRSRLLQNLLLSSSELK SFRLTSSCVSTQSLTHLASGLRHCCHLEELDFSNNHLYEENVELLMGALQGTCRLKRLHF SHFPLEASSLALLIQGLSHMTLLQHLCLRHNQIGDVGTQNLAAILPRLLGLRKLDLSGNS IGPAGGVPLAKSLTHCRCLEEIILGNNSLGDATALGLTQTLPPQLRVLRLPASQLGPEGA LCLARALEQCPHIEEFSLAENNLAGSVPYFCKSVPLLRQIDLISCKIDDQAAKHLATSLK LCPSLEEILLSWNLLGDEVAAELAQVLPQMEQLKRLDLEKNRITACGAQLLAQGLVQGSC VPVIRLWNNPIPADVAQSLQNQEPRLDFAFFDQQPQTL NT seq 5517 nt NT seq  +upstreamnt  +downstreamnt atggactccgagagcctccaactgggcaatgagaacctgtgggcctggtttgtgaggctg ctgagtcaaaactcagaatggctgagtgccaaggttaagttctacctccctaccatggac ctggactgcagcaacatggcccctgagcctgaggtcattcatcatcagctcaggaggctg tacacccagggcctggccacctggcagtctttcatctatagtctgtgcatggaacttgat gtgcctctagagctggaggtaccactgctgagcatctggggccaaaaagatgaattctcc aatcagataggagctggtgaggacagccatcctgaacctctgcagcaccatggtgtcaag cgcccttctcagagctgtgggtcctcaccccaccggaagcactccaggaaacagcagcta gagctggctaagaagtatctgaagctcctaaagacctctgcccaacagaaccatggtggt gaatgcccagaggcagggcatactcatgcttccccacaggcctacatccccccaattctg cagtggagccgggatacatcacccttgaatgctcaggaaggagccactataggagacccc aatacagcagatgacatggatgtgagcatccaggatctcttcaatttcaaggcccccaag ggacctcgagtgacagtactgctgggaaaggctgggatgggcaagaccactctagcacac cgactctgctggaggtgggctaatggtcaggtggaccacttccaggctctgtttcttttt gagttccgcaggctcaacatgatcacacatttgctaacactgcctcagctcctttttgat ctgtacctgagccctgagtcagactcagatgccgtctttcaatacctgaaggagaatgcc catcaagtcttactgatctttgatgggctggatgaggcactccactccagttccaagggt gctgacaatgcaggctcggccctcaatctcttctctgacctctgccgtgggaccctcctg ccaggctgctgggtgatggccacctctcgtcctgggaaactgcctgcctgtgtgcccaca gaggcaaccatggtatatatgtggggctttgatgggctgcgggtagagaaatatatcagc cacttcttcagtgatctgccatcacaagagttggccctggcagaaatgagaaccaatgaa cgtctccggggaatgtgtgcagttcctgcactatgccaagttgcctgcttctgcctccgc catctgcttcccagaagccctccaggacagtctacggccctcctgcctactgtaacccaa ctgtacctgcagatggtgaaaacttttagccacagtgggactctgcctgccacatccttg ttgggccttggaaaagtggcctttaggggactggacactgggaaggtcatcttctctata gaagacatcccttctcccctgatggcttttggatctgtccacagcctcctgacctccttc tgtattcataccagcactggtcaccaagaaataggttatgccttcatccacctcagcctg caagagttctttgctgctctgtatctgatggccagtgacacaatagacaaaaacacactc acctactatgtcaccctcaattcccattggatactgcggaccaaagctagactgggcctc tctgatcatctccctatgttcctggcaggcctggcatcccatacctgccatgcattcctt tgccatctgtctcagcaggacgaagcctgggtgggctccaggcaggctgctgttgttcag gtgctgaggaagttgggtagccgaaagcttacagggccaaagatgatagaattgtatcac tgtgtggctgagacccaggagctggagctggtgaggttcattgcccaaagcctccccttc caactctctttccacaatttcccactgacccgtgcagacctggctgcactggccaacatt ttggaacacaaaactgtccccattcacctggattttgatggctgcccactggagccccac tgcccagaggctttggtaggatgtgggcaggttgagaatctcagctttaaaagcagaaag tgtgggaatgcctttgcagaagccctgggcaggagcttgcctactatggggagcctgaag atgctagggttaacaggaagtaagatcacagcccgaggcatcagccacctgatacaggct ttgcccctctgttcccaattggaggagctcagtttgcacgacaaccagctcaaagaccca gaggtgctgagccttgtggaactgctcccttgcctgccaaagctccagaaacttgacttg agcagaaacagcttctctgtgtcaactctactgtcctcggtgaagctggccacaacatac ccttctgtcagaaagctgcaggtcagggaatctgacttcatcttccttctgtccccaatc acagagaaggctgtgcaacaatcagaagcatcagacttacaggacaaagatagcctgaag gaaaaaggacagagcagaagcctggaactcaggctccagaaatgtcagctcatggtccat aatgcagaagtccttgtggagctattccagaaaggcccccagctggagaaactagatctt tcagggaaccatctggaagatgaaggctgtcgagttgtggcagaggctgcttcacagctg caaattgcccagaagctggacctcagtgacaatggcctctctaagatgggggtgacctat gtgttgagagccatgagcacctgtgggaccctggaagagctgcacatcagcctgctgagc aacactgcagtactcacattttcccaggagccaaggaagcaggagaggagctgcaagagg ggtacaccacttaccagctttgcatctcccgtggcctcggagacatccccgagctctcga aggatcaggctgacacactgtggcttcctggccaaggacatagagaggctctgcaaggca ctgagagccgtctgccaaccccaccacctgggtcatcttgacctatcagacaactctctg ggggacgaaggggtggccctactagccaagctgctaccaggattgggtcccctgcagtcc ttgaaccttagcaggaatggcgtgtccctggatgctgtgtttggcttgatcacttgcatg tcttctcttcagtgggtgttccacctagatgtcagccttgacagtgaccacattctcctt ggaggagctgggactggcagggatgcaccagctgggagatgtgggccagagtttgtggct ggaggcccattactggcgttcagctctcactatacctccaggagcttccgacttcagggt tgtcaactggagcccctgagccttgcctgcctctgtgccactctggagaagtgcccaggg cctctggaagtccacttgtcctgcaagaccctgagtgacgagagcctgaagaccctgatg cagtgcctgccccagctgccccagctcagcctgctgcagctgagccacacagtcctatct tcaagaagcctcttcctgctggcagatgtcttcaacctgtgcccacgggttcagaaggtc aatctcaggtccctatgccatgctgtcctgcactttggctccaaggaggagcaagagggt gtgtgctttgggtttccaggatgcagcctcagccaggagcatatggagccgctgtgttgt gcactgagcaggtgcaaagccctcagccagcttgacctcacagacaacttgctggatgac agtggactcaggtgccttctggaatgcctgccacagctacccatctgtgggtggcttgac ctcagtcacaacagtgtctctcaggaaggggtcctgtgcctgctggagaccctgccttcc tgccctcgtgtctgtgagatctctgtaagtctgggctctgagctgaacttccggatacac ttgtccagggaggaagaagcagagacaaaactgaggatgtgtgagtgtagcttcggccca gaacacttatccagactggcttccagcctgagccaggcccaacagctgacagagctcacg ctgaccaggtgccacttggacttgccacagctgaccaacttcctgaatctggtgaatcgg ccagcagggtggctgggcctcaggttggaagagccctgggtgggccatatcagcttacca gctgtgatggaagcctgtgcccaggcctcaggatgtctcactgagttaagcctctctgag acccagcagcagctgtggctccggctagattttcctcaccaagaagacagttccgaggtc atggcaaacaggttagctcactgtgacctggggactgaccacagtcttcttatgagacca ttgatggagacatgtgccagactgcaacagctcagcttgtctcaggttaacttcagtgac gatgatgacaccaggtccagacttctgcagaacctcctgctgtctagcagtgagctcaag agcttccggctgacctccagctgtgtaagcacacaaagcctcacccacctggcatctggt ctgagacactgctgccatctggaagagctggacttctctaacaaccatctctatgaggag aacgtagagctactgatgggagcccttcaggggacctgcaggctaaagaggctgcacttc agtcactttccactggaagcctcctctctggcattgctcattcaaggactaagccacatg accctactgcagcacctttgcttaaggcacaaccagattggagatgtgggtacccagaac ttagctgccatcttgccaaggcttctagggctcaggaagttagacctatcagggaacagc attggcccagctgggggagtgccactggcaaagtctctcacccattgcagatgcttggag gagatcatactgggcaacaattctctgggggatgccacagccctggggctgactcagaca ttgcccccacaactgagggttctacgtctgccagccagccagctgggtccagagggggcc ctgtgcctggcccgggccctggaacaatgcccacacatagaagagttcagcttggcagag aataacctggctggaagtgtcccatatttctgcaagagtgtcccactactcagacaaatt gacttgatttcctgcaaaattgatgaccaagcagccaagcaccttgctaccagcctcaag ctttgcccatccctggaagaaatcttgctgtcctggaacctccttggtgatgaggtggct gctgagttggcccaggtgctgccgcagatggagcagctgaagagattggacttggagaag aaccggatcacagcatgtggagcccaacttctggctcaagggctggtccagggctcctgt gttccagtcattcgcctctggaacaaccccattcctgctgatgtggcccagagtctgcag aaccaggagcccaggttggactttgccttctttgatcagcagccccagactctttga

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