KEGG   Phodopus roborovskii (desert hamster): 127234888
Entry
127234888         CDS       T08852                                 
Symbol
Cx3cl1
Name
(RefSeq) fractalkine
  KO
K05508  C-X3-C motif chemokine 1
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04060  Cytokine-cytokine receptor interaction
prob04061  Viral protein interaction with cytokine and cytokine receptor
prob04062  Chemokine signaling pathway
prob04148  Efferocytosis
prob04668  TNF signaling pathway
prob05163  Human cytomegalovirus infection
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    127234888 (Cx3cl1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    127234888 (Cx3cl1)
   04061 Viral protein interaction with cytokine and cytokine receptor
    127234888 (Cx3cl1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    127234888 (Cx3cl1)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    127234888 (Cx3cl1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    127234888 (Cx3cl1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:prob04052]
    127234888 (Cx3cl1)
Cytokines and neuropeptides [BR:prob04052]
 Cytokines
  Chemokines
   127234888 (Cx3cl1)
SSDB
Motif
Pfam: IL8 CXCL16 MobL
Other DBs
NCBI-GeneID: 127234888
NCBI-ProteinID: XP_051057920
UniProt: A0AAV0A083
LinkDB
Position
Unknown
AA seq 395 aa
MVPSPLAWLLCLAAFCHLGTLLEGQHLGVTKCNITCHKMTSEIPVTLLIHYWPNQESCSR
PAIVLETRLHRHFCADPNEKWVQDAMKYLDRKAAAPAQNNGKFEKLVNVTSGITPATKGL
PPSVLTEPEATETLELTTIPQESQRPMGTSQEPPATVTQSSLSTSEAQDAGLATRPQTTG
IFEKAAISTTIWQSSAAYQSKSRLQPEEKATGSPSTTAPLTQAPTTSHLTPENAGSKGQT
PSPVMSAGSKGQTPSPATSLGSEETNQAHTDNFQDREAGNTVHPSVAPISSEGIPSPDLV
ASGSWPPKAEEPIHATAESQKRSVFITPVPDSQAATRRQAVGLLAFLGLLFCLGVAMFAY
QSLQGCSRKMAGEMVEGLRYVPRSCGSNSYVLVPV
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggttccctctccgctcgcgtggctgctgtgcctggccgcgttctgtcatctaggcacc
ctgctggagggtcaacacctcggcgtgacgaaatgcaacatcacctgccacaagatgacc
tcagaaatcccggtgacattgcttatccactattggccgaaccaggaatcgtgcagcagg
cccgccattgtcttggagacgagactgcacagacacttctgtgctgacccaaatgagaaa
tgggtccaagacgccatgaagtatctggaccgcaaggctgctgccccagctcagaataat
ggcaagtttgagaaattggtcaatgtgacatctgggatcaccccagccaccaagggactg
cccccatctgttctgacagagcctgaagccacagagaccttggagctgactactattccc
caggagtcccagaggcctatggggacttcccaggagccaccagcaacagtaactcaatca
tctctctccacttctgaggctcaggatgcagggcttgccaccagacctcaaaccactggg
atttttgaaaaggctgccatctctaccaccatttggcagagttctgcagcctaccaatct
aaatctaggcttcagccggaggagaaggctactggatccccatccactacagccccattg
acccaggcacccaccacttcacatttaaccccggagaatgctgggtctaagggtcagacc
cccagtccagtgatgtctgctgggtctaaaggtcagacccccagtccagcgacgtctcta
gggtctgaggagacaaatcaagctcatactgataatttccaggacagggaagctggcaac
acagtccatccctcagtggcccccatttcctctgaagggatccccagcccggacctggtg
gcttcaggcagttggcctcccaaggcagaggagcccatccatgctactgcagagtcccag
aagcggagtgtctttatcactcctgtccctgactcccaggcagccacccggaggcaggca
gtggggctgctggcattcctgggtttactcttctgcctgggagtggctatgtttgcctac
cagagcctccagggctgttcccgcaaaatggcaggggagatggtagaaggcctccgctat
gtgccccgtagctgtggcagtaactcatatgtcctggtgccagtgtga

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