Phodopus roborovskii (desert hamster): 127235297
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Entry
127235297 CDS
T08852
Symbol
Pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127235297 (Pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prob03009
]
127235297 (Pop1)
03016 Transfer RNA biogenesis [BR:
prob03016
]
127235297 (Pop1)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127235297 (Pop1)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
127235297 (Pop1)
Ribosome biogenesis [BR:
prob03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
127235297 (Pop1)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
127235297 (Pop1)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
127235297 (Pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
127235297
NCBI-ProteinID:
XP_051058491
UniProt:
A0AAV0A0E2
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MSNAKERKHAKKMRHQPTNVTLASGFGADRGGVRQFGGGRPSQSQKQELHSGTSQQLQVK
TSPHLLPESDVNEQSSSKIMFKKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMLK
AVAQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEIAKKEAEKAAHQKKEHSKNKCHK
ARRCHVNRTLEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGERPTSKSHRACYRAMTN
LCLLQDLSYYCCLELKGKEEEILKVLSQMCSTDTGLTFAAVHCLSGKRQGTVMLYRANKY
PREMLGPVTFIWKSKKTPGDTSEDRQLWIWLHPTLKLAVLEEMKTMCHCSESINSSVSVP
DPLLTPAQEESQPELADDKIGKKRKRKDDEGSAKPTKRTIGDGTRDPCQPRSWVSPTTGI
VISDLTMEMNRFRLIGPLSHCILTSALRAAPLHTGEEDAEETPHHWWSDTSKSSDGVFLH
QRQEAVFQLLGGISSPAEIPAGSILGLTVGDPRVNLPPQRSRALPHLERYQDNEQVRQLL
LEGVPLECAHSFIWNHDICRSVTENKISDQDLNRMRSELLVPGSQLVLGPRESKIPILLI
QQPGKVTGEDRLGWGSGWDVLLPKGWGMAFWIPFVYQGARVGGLKEAMVHSQYRRSPNIP
GDFPDCLAGVQFAEEQAKDLLEKYKRRPPAKRPNYVKLGTLAPFCCPWEQLTQDWESRVQ
APMPGVQDDPRRLGVTFVPEEICQLSNEAGISGNHPTKPEVSGCEAQAGTEVVLGPGASE
SHIAATGSQLCVLRNRKLLRQLSAWCGSGSEARQAPCRGQQELTRKACSSILDDFPRALV
WVRLSLLRKGSPEPRTMICVPSEEDLLQLRQDQCYHGPRESKHSDPFKSLILKQKEERKM
EKRQSQEHSVPRGPVAGAPAAGQAALTQGLWSGPLPGLTSHCSRLLLGFVTQGDFSMAVG
CGEALGFVSVTGLLEMLSSQPAATRGLVLLRPPTSLQYRFARVAIEV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaagaaaacatgctaagaaaatgagacaccagcccacgaatgtc
actttagcctctggctttggggctgacagaggtggagtgcgtcaatttggaggagggaga
ccttcccaatctcaaaaacaagagcttcattctggaacctcccagcaattgcaagtgaag
acgagtccccacttgcttcctgagtctgatgtgaatgagcaatcttcctccaaaatcatg
ttcaagaaaaagggaggctggaaagcaggtcctgagggcacatctcaggagatccccaag
tatataactgcttctacattcgcccaggcacgagcagctgagatcagtgctatgttaaaa
gccgtggcccagaagtcgtctaattcactggttttccagacccttccaaggcacatgcga
cgtagagccatgagccacaatgtcaaacgcctccctagacggttgcaggagatagccaaa
aaagaggcagagaaagctgctcaccagaagaaagaacattcaaaaaataaatgccacaaa
gccaggagatgtcacgtcaaccggacgctggaattcaaccgtagacagaagaagaatata
tggcttgagactcacatctggcacgccaaacggtttcatatggtgaagaagtggggttac
tgccttggggagaggcccacgtccaagagccaccgagcctgctaccgcgccatgacaaat
ctctgcctcctgcaggacttatcgtattactgttgtttggagttgaaaggcaaagaggaa
gaaatactgaaggtgctttctcagatgtgtagcacagacacaggactgacttttgctgca
gttcactgcttgtctgggaagaggcaagggactgtcatgctttaccgggcaaataagtat
cccagagaaatgcttgggcctgttacgtttatttggaagtctaagaagaccccaggggat
acttctgaggataggcagttgtggatctggcttcatccaactcttaaactggctgtcctg
gaggaaatgaaaactatgtgccactgttcagaatccatcaactcaagtgtcagtgttcct
gacccactcctgacaccagcccaagaagaaagtcagcctgaactagcggacgacaaaatt
ggcaagaaaagaaaaaggaaagatgatgaaggaagtgctaaaccaactaagagaactatc
ggtgatgggactagagacccgtgtcagccacgttcgtgggtctctcctactacagggatt
gtcatcagtgatttgacaatggagatgaacaggttccggctgattggtcctctttcccac
tgtatcctgacctcggcactgagggctgctcctctgcacacaggggaagaggatgcagag
gagacaccccatcactggtggagtgacacttcgaagagctctgatggagttttccttcat
caaagacaagaagcagtgtttcagttgttgggagggatatcgtcaccagcggaaatccct
gcaggttctattctggggttgacagttggggatccgagagtaaatttgccaccacagcgg
tctagagctttgccacatctggaaagataccaagataatgagcaagttagacagctgctt
ctggagggtgtgcccttggagtgtgcgcatagctttatctggaaccacgatatctgtagg
agtgtcacagagaataaaatctcagatcaggatttaaaccggatgagaagtgaattgctg
gtgccaggctcacagcttgttttagggcctcgtgaatccaaaatacctatccttttgatc
cagcagccagggaaagtgactggtgaagaccgcctgggctggggaagtggctgggatgta
ctccttcccaagggttggggcatggctttttggattccattcgtctaccaaggtgcaaga
gttgggggtttaaaagaggctatggtgcattctcagtatagaaggtcacctaacatccca
ggtgacttcccagactgccttgctggggttcagtttgctgaagagcaagctaaggatctt
ctggaaaagtacaaaagacgccctcctgccaaaaggcccaactatgttaagcttggcaca
ctggcacctttctgctgtccctgggagcagctgactcaggactgggagtccagggttcag
gccccgatgcctggtgtccaggacgacccaaggcgactcggagtgacttttgtccctgaa
gagatctgtcagttgtctaatgaggcaggcatatctggaaaccaccccacgaagccagaa
gtctcaggctgtgaggcacaggcagggactgaagtagtcctggggccgggtgccagtgag
agccacattgctgccaccggtagccagctctgcgttcttcggaataggaaattactgaga
cagctctctgcttggtgtgggtcgggttctgaggccaggcaggctccttgcagaggccag
caagaattgaccagaaaggcctgctcgtccattctggacgatttccccagagccctggtg
tgggtcaggctgtccctgctcaggaagggcagccccgagcctcgcaccatgatctgtgtc
ccatctgaggaggacctactccagctcaggcaggatcagtgttaccatggaccccgggaa
tctaaacacagcgacccatttaagagcctgattctgaaacagaaagaagagaggaaaatg
gagaagcggcagagccaagaacactcagtccccaggggcccggtggcgggggcgcccgcg
gctgggcaggcagctctgacacaggggctgtggtcaggacctctcccaggactaacttca
cactgctcccgcctcctcctgggctttgttacacagggagacttttctatggctgttggc
tgtggagaagccctgggctttgttagtgtgaccggcttgctggaaatgctgtccagccag
ccggcggccacaaggggcctggtgctgctgcgacctcccacctcgctgcagtatcggttt
gcgagagttgccattgaggtgtga
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