Phodopus roborovskii (desert hamster): 127235389
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Entry
127235389 CDS
T08852
Symbol
Col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
127235389 (Col14a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
prob00535
]
127235389 (Col14a1)
Proteoglycans [BR:
prob00535
]
Extracellular matrix (ECM) proteoglycans
Others
127235389 (Col14a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_PBP1
Arylsulfotran_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
127235389
NCBI-ProteinID:
XP_051058614
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MKIFQRTMRYWLILAFLEVAYICTIVRGQVAPPTRLRYNVISHDSIQISWKAPRGKFGGY
KLLVAPASGGKTNQLNLQNTATKAIIQGLLQEQNYTVQLIAYNKDKESKPAQGQFRIKDL
ERRKDPAKPRVKAVDKGNGSKPTSPEEVKFFCETPAIADIVILVDGSWSIGRFNFRLVRN
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIDAVRSLPYKGGNTLTGL
ALNFIFENSFKPEAGSRSGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
SELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKASALATIAPPTEL
ITSEVTARSFMVNWTHTPGKVGKYRVVYYPTRGGKPEEVVVDGSVSSIVLKNLMSSTEYQ
IAVFAVSVHTASEGLRGTETTLALPMASDLELYDVTENSMRVKWDAVPGATGYLILYAPL
TEGLAGDEKEMKIGETHTDIELRGLFPNTEYTVTVYAMFGEEASDPATGQETTLPLTPPR
NLRISNIGSNSARLTWDPTSRKISGYRIVYTSADGTEINEVEVDPVTTFPLKGLTPLTEY
SVSVFSIYEEGQSLPLVGEFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSAEEGQHKLMWI
PVYGGKTQEVALKEEQDSYVVEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDDFWTE
TPTTVEPTSPVTSVLQTGIRNLVVDDETATSLRVTWDISDSNVEQFRVTYLTAQGDPMEE
VIMVPGIQNNVLLKTLIPDTEYKVTVTPIYTSGEGASVSAPGRTLPSSGPQNLRVSEEWY
NRLRITWDPPSAPVKGYRIVYKPVSIPGQTLETFVSADINTIVITNLLSGMDYNVKIFAS
QATGFSDALSGLVKTLFLGVTDLQANQVETTSLCAQWQIHRHATTYRIVLESLQDTQTQE
STLGGGVNRHCFYGLQPESEYKISVYTKLQEIEGPSVSIMQRTQSLPTEPPTFPPTIPPA
KEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDKIGADGTQVAMVQFTDDPR
TEFKLDAYKTKETLLDAIRHISYKGGNTKTGKAIKHVRDTLFTAESGTRRGIPKVIVVIT
DGRSQDDVNKISREMQADGYNIFAIGVADADYSELVRIGSKPSSRHVFFVDDFDAFKKIE
DELITFVCETASATCPVVHKDGIDLAGFKMMEMFGLVEKDFSAVEGVSMEPGTFNLFPCY
QIHKDALVSQPTKYLHPEGLPSDYTMSFLFRILPDTPHEPFALWEILNKNSDPLVGIILD
NGGKTLTYFNYDYTGDFQTVTFEGPDIRKMFYGSFHKLHVVISKTLAKVVVDCKEVGQKA
INASANITLDGVEVLGRMVRSRGPNGNSAPFQLQMFDIICSASWASKDRCCELPGLRDEE
SCPDLPRSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGPQGP
PGPQGPSGLSIQGMPGMPGDKGDKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKDGSS
GPPGPPGPIGIPGAPGVPGITGSMGPQGALGPPGVPGPKGERGERGDLQSQAMVRAVARQ
VCEQLIQSHMARYTAILNQIPSHSSSIRTIQGPPGEPGRPGSPGTPGDQGPPGAPGFPGN
AGVPGTPGERGLTGLKGEKGNPGIGSQGPRGPPGPAGPSGESRPGSPGPPGSPGPRGPPG
HLGVPGPQGPSGQPGYCDPSSCSSYGVGVSHPDQPEFTPVQDEQEAMDLWGSSI
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcagcgcacaatgcggtactggctgattctggcttttttggaagttgct
tatatctgtaccatcgtccggggtcaagtggccccacctacaaggttaagatataatgta
atatcccacgacagcatacagatttcatggaaagctccaagagggaaatttggtggatac
aaactgctcgtggctccagcttcagggggaaaaaccaaccagctcaatctgcagaacact
gcaacaaaagcgatcattcaaggccttctgcaggagcagaactacacagttcaacttatt
gcctacaacaaggacaaagaaagcaagccggctcaaggccagttcagaattaaagattta
gagagaagaaaggatccagcaaagcccagagtcaaggctgtggacaaaggaaatggaagc
aagccaacttcaccggaagaagtaaaattcttttgtgagactccagccattgctgacatt
gtcatcctggtggatgggtcatggagcatcgggagattcaacttcaggcttgtgcggaat
ttcttggaaaacctggtcacagcattcaacgtgggctcagagaagacacggattggcttg
gcacagtacagtggggaccccagaatagagtggcacttaaacgcctttaacacgaaagat
gaagtaattgatgctgtccgaagccttccctataagggaggaaacactctaacaggtctt
gctctgaacttcatttttgagaatagcttcaaaccagaagcaggatcaaggagtggggtt
tccaagattggcattttaatcacagatggaaaatcccaagatgatattatcccaccatct
agaaacctccgtgagtctggtgtagagctgtttgccataggggttaaaaatgccgacctg
agtgagctgcaggagatcgcctctgagccagacagcacccatgtgtacaacgttgctgaa
ttcgacctgatgcacacagtggtggagagcctgaccaggactgtgtgctccagagtagaa
gagcaagacaaggagattaaagcatcagcccttgccaccattgcgccacctacagagttg
attacttctgaagtcaccgccaggagctttatggtcaactggactcacaccccaggaaaa
gtgggaaaatacagagttgtgtattatcccacccgaggtggaaaaccagaggaggtggtg
gtggatgggagtgtatcttccatagtgttgaaaaacttgatgtcttcaactgagtaccag
atagcagtgtttgcagtatctgtccacactgctagtgaaggcctgcgggggacagaaacc
acactggccttgcccatggcttccgacctggagctgtatgatgtgactgagaatagcatg
cgtgtcaagtgggatgcggtccctggcgccacgggctatctgatcctctatgctcccctc
acagaaggtctggctggagatgaaaaagagatgaagatcggagagactcacacggacatc
gaactgagagggctattccccaatacagaatatacagtcactgtgtacgctatgtttgga
gaagaagccagcgatcctgctacagggcaggagaccaccttacccttaaccccaccaaga
aatttgaggatctccaacattggctccaatagtgctcggttaacctgggatcccacatca
cgaaagatcagtggttacaggattgtgtacaccagtgctgatgggacagaaatcaatgag
gttgaagtggatcctgtcactacattccctctgaaaggcttgactcctctcacggagtac
tctgtttccgttttctccatctatgaggaggggcagtccctgcctctggttggagagttt
actacagaggaagttcctgcccagcaatacttggaaattgatgaggtgaagacagacagt
tttcgagtgacctggcatccactctcggctgaggaagggcagcacaagctgatgtggata
ccagtctacggcgggaagacccaggaggtcgccctgaaggaagagcaggactcatacgtt
gttgaaggcctggatcctggaactgagtatgaagtctcactcttagctgtgctcgacgat
ggaagtgagagcgaggtggtgactgccgtcgggaccacacttgatgacttttggacagaa
acacccacgactgtagagcctaccagccccgtgacttcagttctccagacaggaatcaga
aacctggttgtagatgatgaaacggctactagcctgcgggtcacatgggacatttctgac
agcaatgtggagcagtttagggtgacctacctgacagcccaaggggaccccatggaagaa
gtgatcatggtacctggaatacagaacaatgtcctcttgaagactctaattccagacact
gaatacaaagtcacggtgactcccatctacacctctggagaaggtgccagcgtttctgcc
ccgggaagaactttgccatcctccggtccacagaacttaagggtctcagaagaatggtac
aaccggttgcgcattacatgggacccaccatctgcccctgtgaagggctataggattgtc
tacaaacctgtgagcattcctggtcaaactctggaaactttcgtgagtgctgacatcaac
accattgttatcacaaatctcctcagtggaatggactacaacgtgaagatatttgcttcc
caggccacaggcttcagtgatgctctgagtggcctcgtgaaaacactgtttttgggtgtc
acagatctccaagccaatcaggttgaaacaacaagcttgtgtgctcagtggcaaatacat
cgccatgctaccacctataggatagttctagaatctcttcaggacacacaaacacaagaa
tccaccttgggaggaggtgtaaataggcattgcttctatggacttcagccagaatcagaa
tataaaatcagtgtttacacaaagctccaggagattgagggaccaagtgtgagcatcatg
caaagaacacaatcgcttcccactgaaccaccaactttccctccaaccattccaccagca
aaggaagtatgtaaggctgccaaggcagacctagtattcatggtggatggatcctggagt
atcggagatgacaatttcaataagatcatcaattttctgtatagcactgtgggagcgctg
gacaagattggtgcagatgggactcaggtggcaatggttcagttcactgatgaccccaga
acagaattcaaacttgatgcttacaaaaccaaggagacacttcttgatgcaatcagacac
atttcctacaaaggaggaaatactaaaacaggaaaagctatcaagcacgttcgcgatacc
ttattcactgcagagtcaggtacgaggagaggcatcccgaaggttatcgtggttataacc
gatggaagatcacaagatgatgtcaataaaatctccagggagatgcaggcagatggttac
aacatctttgccatcggtgtggctgatgctgactactcggagttggttcggattggcagc
aaacctagctcacggcatgtcttctttgtggatgactttgatgccttcaagaaaattgaa
gatgaattaattacttttgtctgtgaaaccgcatcagcaacctgtccagtggtgcacaag
gatggaattgatcttgcaggatttaagatgatggagatgtttggtttggttgaaaaggac
ttttctgcagtggaaggagtgtctatggaacctggtaccttcaatttgttcccgtgttat
caaatccacaaagatgctctggtttcccagccaaccaagtatctgcacccggaaggactg
ccttctgactatacaatgagtttcctgttccggatccttcctgacactccacacgagcca
tttgctctttgggagattttgaataaaaattctgacccactggttgggattattttagac
aatggtgggaaaactctaacttatttcaactatgactatactggagattttcaaactgtc
acttttgaaggacctgacatcaggaaaatgttctatggaagctttcacaagctccatgtt
gttatcagcaagactttggccaaagtggttgttgactgtaaggaagtgggccagaaggca
atcaacgcatcagccaatatcacattggacggcgtggaagtcctggggagaatggtcagg
tcaagaggacccaatggaaactctgcaccattccagttacagatgtttgatatcatttgc
tctgcatcatgggccagtaaagaccgatgctgtgaacttcccggcctgagggatgaagag
tcctgcccagaccttccacgttcctgctcttgctcagaaactaacgaagtggctctagga
ccagctggccccccgggtggtccaggcctccgaggaccaaaaggccaacaaggtgaacag
ggtccgaagggaccagaaggccctcggggagaaacaggtcctgcaggaccccagggaccc
cctggaccccaaggacccagtggtctgtccattcaaggcatgcctggtatgccaggtgac
aaaggagacaaaggagatgctggccttcctggtccacagggtgtccctggaggtgtgggt
tcaccaggacgtgatggatccccaggccagaggggatttcctgggaaggatggttcgtct
ggtcctccagggccacctgggccaattggcattcctggagcccctggtgtcccagggatc
acgggcagcatgggaccacaaggagccttggggccacctggtgtccctggaccaaagggc
gagcgaggtgaacgaggagatctgcagtctcaagccatggtgagggcagtggcacgccaa
gtgtgtgagcagctcatccagagtcatatggccaggtacacagccatcctcaaccagatc
cccagccattcctcatccatccgaactatccagggccctcctggggagcctgggagacca
ggttctcctggaacccctggagaccagggacccccaggtgccccaggcttcccaggaaat
gcaggtgtgccggggaccccaggagaaagaggtctaactggtctcaaaggagagaaaggc
aatccaggcattgggtctcaaggtccaagaggtccccctgggccagcaggaccttcaggg
gaaagtcgtcctggcagtcctgggccacctggctctcctggaccaagaggtcccccaggt
catctaggagttcctggaccacagggtccttctggccagcctggatattgtgacccctca
tcatgttcttcctatggtgttggagtgtcccatccggatcagcctgagttcacgccggtc
caggacgagcaggaagccatggatctgtggggctcaagcatctga
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integrated database retrieval system
