Phodopus roborovskii (desert hamster): 127235422
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Entry
127235422 CDS
T08852
Symbol
Taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127235422 (Taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127235422 (Taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127235422 (Taf2)
03036 Chromosome and associated proteins [BR:
prob03036
]
127235422 (Taf2)
Peptidases and inhibitors [BR:
prob01002
]
Metallo peptidases
Family M1
127235422 (Taf2)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127235422 (Taf2)
Coactivators
SAGA/TFTC/STAGA complex
127235422 (Taf2)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127235422 (Taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
127235422
NCBI-ProteinID:
XP_051058691
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MSPTGIESSRMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHNESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEVLVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLSFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDCSLFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLNMIQTDPVPYVRHKILNMLTKNPPFTKNMDSPLCNEALVDQLWKLMNSG
TAHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAGPANQES
ASNPGCHAQLAGFQNPFASSQDEEEVDMDTVHDSQAFISHHLNMLERPSTPGLCKYRPSS
SRSSLMPQHSLGSDIIPTTKPQWTMELSRKGIGKEQPMEMSMHSMGAVPLSVFAKESTSS
RHSEHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKDKEPFTFSSPASGRSVRSPSLSD
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccacaggcatagagtcctccaggatgaacaggaagaaaggagacaagggcttt
gaaagcccacggccctacaaattaacccatcaggtcgtctgcatcaacaacataaacttc
cagagaaaatctgttgtgggatttgtggagctgactatatttcctactgttgcaaacttg
aatagaatcaagttgaacagtaaacagtgtagaatttaccgagtcaggatcaatgacttg
gaggctgcttttatttataatgacccaaccctagaagtttgtcacaatgagtcaaaacag
agaaacctcaattatttttccaatgcctacgcagctgcagttagtgctgtggatccagat
gctggaaatggagaactctgcattaaggttccatcagaactctggaagcatgtcgatgag
ttaaaggttctgaagatacatattaacttttctttggatcagccgaaaggaggtcttcat
tttgtggtacccagtgtagagggaagtatggcagagagaggtgctcatgtcttctcttgt
gggtatcaaaattctacaagattttggttcccatgtgttgattcatactctgagttgtgt
acgtggaaattagaatttacagtagatgccgcaatggtagccgtatccaatggagatttg
gtagagacagtgtacacccatgatatgaggaagaagaccttccattatatgcttactatt
cctacagcagcatccaatatctctttggccattggaccttttgaagtacttgtagatcca
tatatgcatgaggttacacatttttgtttgccccagcttcttccgttacttaaacatacc
acgtcgtaccttcacgaagtttttgagttttatgaagaaattttgacttgtcgctatcca
tactcctgttttaagactgtcttcatcgatgaggcttatgttgaagtggctgcttatgct
tctatgagtatttttagcacaaacctcctgcatagcgccatgattatagatgagacgccc
ctgaccagacggtgcctagcccaggccttagcgcagcagttctttggatgcttcatatcc
agaatgtcttggtctgatgaatgggtcctgaagggaatttcaggctatatttatggcctc
tggatgaaaaaaacttttggtgtcaatgagtaccgccactggattaaagaggaactagac
aaaattgtggcatatgaactcaaaactggaggagttttattacatcccatatttggtggt
ggaaaagaaaaggataaccctgcatctcatcttcacttttcaataaagcatccacataca
ctgtcctgggaatactacactatgtttcagtgtaaagctcacctcgtgatgagactgatt
gaaaacagaatcagcatggagtttatgctacaagttttcaataaactgctcagtctggct
agtactgcttcgtctcagaagttccagtcacacatgtggagtcagatgctggtttccacc
tatgggtttttgaaatccatttccaacgtctctggcaaagacatccagcccttaataaag
cagtgggtagaccagagtggagtagtaaaattttacggaagtttcgcatttaatagaaaa
cgaaacgttttagaactagaaataaaacaagattacacatctcctggaactcagaagtac
gtgggaccacttaaagtgacagtgcaagagttagatggatccttcaaccataccttgcaa
atcgaagaaaacagccttaaacatgatataccgtgccattcgaaaagcagaaggaataag
aagaaaaaaattccgctgatgaatggggaagaagttgacatggatctttctgcaatggac
gctgattcccctttgctgtggataaggatagacccagatatgtcagtcctgaggaaggtg
gaatttgagcaggctgattttatgtggcagtatgaactccgctatgaaagagatgttgtt
gctcagcaggaatctatccttgccttggagaaatttcccaccccggcatcacgtcttgcg
ctcaccgatatactagagcaagagcagtgtttttaccgagtgagaatgtcagcgtgcttc
tgtcttgcaaagattgcaaactcaatggtgagcacatggacaggaccaccagccatgaag
tctctctttactagaatgttttgttgtaaaacttgtccaaacatcgtgaaaacaaacaac
ttcatgagttttcagagttattttctacagaagactatgccagtagccatggccttgtta
agagatgtacataatctttgtcccaaagaagttttatcatttattttagacttaatcaag
tacaatgacaacaggaaaaataagttttcagataactattaccgtgcagaaatgattgat
gccctggctaattctgtcacacctgctgtcagtgtgaataatgaagtcagaactttggat
aacttaaatccggatgttcgactaattcttgaagaaataacccgttttttgaatatggag
aaacttctcccaagttacaggcacactatcactgtcagttgcttgagagccataagggtg
cttcagaagaatggacatgtgccaagtgattgctctcttttcaaatcctatgccgagtat
ggccatttcgtggacatcaggatagcagctctggaagctgttgttgattacactaaagtg
gaccggagctatgaagaactccagtggctacttaatatgattcagactgaccctgtaccg
tatgtaagacataagattctaaacatgttgactaagaatccaccatttacaaagaacatg
gattctcccttatgcaatgaagccctagtagatcagctatggaaactaatgaattctggt
actgcacatgactggaggttacggtgtggtgctgtggacttgtatttcactctgtttggc
ctcagtagaccttcctgcttacccttgccagaacttgggcttgtccttaatctaaaagag
aaaaaagctgtcttgaatcctaccataattccagaagctggaccagccaaccaggaatct
gcgagtaacccaggctgtcatgctcaactagctggatttcagaacccttttgcaagttct
caagatgaggaggaggttgatatggatactgttcatgacagtcaggccttcatttcccac
catctgaacatgcttgaaaggccatctactccagggctttgtaaatatcgcccatcgagc
tccagatcttccttaatgccccagcattcattaggctctgacatcatacccaccacaaaa
ccccagtggactatggaactgtcccgaaagggaataggtaaagagcagcctatggagatg
agcatgcattccatgggagcagtgccactctcagtgtttgctaaggagtctacatcctct
cgacacagcgagcaccatcaccatcatcaccatgagcacaagaagaagaagaagaagcac
aagcacaaacacaagcacaaacacaagcacgacagcaaagacaaggacaaggagcccttt
accttctccagccctgccagtggcaggtctgtgcgctccccatccctgtccgactga
DBGET
integrated database retrieval system
